RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 SPEF2Q9C093 1822 aa20.31■□□□□ 0.84
SREK1-212ENST00000522912 PRPF40BQ6NWY9 871 aaKnown RBP20.31■□□□□ 0.84
SREK1-212ENST00000522912 QTRT2Q9H974 415 aaKnown RBP20.31■□□□□ 0.84
SREK1-212ENST00000522912 RBM8AQ9Y5S9 174 aaKnown RBP20.31■□□□□ 0.84
SREK1-212ENST00000522912 RPS6KA4O75676 772 aa20.31■□□□□ 0.84
SREK1-212ENST00000522912 MCM2P49736 904 aa20.3■□□□□ 0.84
SREK1-212ENST00000522912 ATP2B3Q16720 1220 aa20.3■□□□□ 0.84
SREK1-212ENST00000522912 BCL2L12Q9HB09 334 aa20.3■□□□□ 0.84
SREK1-212ENST00000522912 CCDC158Q5M9N0 1113 aa20.29■□□□□ 0.84
SREK1-212ENST00000522912 GORABQ5T7V8 394 aa20.29■□□□□ 0.84
SREK1-212ENST00000522912 TMX3Q96JJ7 454 aa20.29■□□□□ 0.84
SREK1-212ENST00000522912 SEC31BQ9NQW1 1179 aa20.29■□□□□ 0.84
SREK1-212ENST00000522912 TTC39AQ5SRH9 613 aa20.29■□□□□ 0.84
SREK1-212ENST00000522912 SEC62Q99442 399 aaKnown RBP20.29■□□□□ 0.84
SREK1-212ENST00000522912 GNPATO15228 680 aa20.28■□□□□ 0.84
SREK1-212ENST00000522912 TAF5LO75529 589 aa20.28■□□□□ 0.84
SREK1-212ENST00000522912 CASZ1Q86V15 1759 aa20.28■□□□□ 0.84
SREK1-212ENST00000522912 PDE8BO95263 885 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 RAB3GAP1Q15042 981 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 CREB3L3Q68CJ9 461 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 AMIGO3Q86WK7 504 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 NARFQ9UHQ1 456 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 AKAP11Q9UKA4 1901 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 RGL2O15211 777 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 SCARF1Q14162 830 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 ADCK5Q3MIX3 580 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 SLFNL1Q499Z3 407 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 CCDC152Q4G0S7 254 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 USPL1Q5W0Q7 1092 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 TBC1D9BQ66K14 1250 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 CCDC129Q6ZRS4 1044 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 NOL8Q76FK4 1167 aaKnown RBP20.27■□□□□ 0.84
SREK1-212ENST00000522912 ZGPATQ8N5A5 531 aaKnown RBP20.27■□□□□ 0.84
SREK1-212ENST00000522912 TTC14Q96N46 770 aa20.27■□□□□ 0.84
SREK1-212ENST00000522912 SRP68Q9UHB9 627 aaKnown RBP20.27■□□□□ 0.84
SREK1-212ENST00000522912 BRWD3Q6RI45 1802 aa20.27■□□□□ 0.83
SREK1-212ENST00000522912 RTL9Q8NET4 1388 aa20.27■□□□□ 0.83
SREK1-212ENST00000522912 HSP90B1P14625 803 aaKnown RBP20.26■□□□□ 0.83
SREK1-212ENST00000522912 KCNJ4P48050 445 aa20.26■□□□□ 0.83
SREK1-212ENST00000522912 ERFEQ4G0M1 354 aa20.26■□□□□ 0.83
SREK1-212ENST00000522912 MCMDC2Q4G0Z9 681 aa20.26■□□□□ 0.83
SREK1-212ENST00000522912 IL27Q8NEV9 243 aa20.26■□□□□ 0.83
SREK1-212ENST00000522912 SLC27A2O14975 620 aa20.26■□□□□ 0.83
SREK1-212ENST00000522912 FKBP4Q02790 459 aaKnown RBP eCLIP20.26■□□□□ 0.83
SREK1-212ENST00000522912 TICAM2Q86XR7 235 aa20.26■□□□□ 0.83
SREK1-212ENST00000522912 HELBQ8NG08 1087 aaPredicted RBP20.26■□□□□ 0.83
SREK1-212ENST00000522912 MROH5Q6ZUA9 1318 aa20.25■□□□□ 0.83
SREK1-212ENST00000522912 C4BP0C0L5 1744 aa20.25■□□□□ 0.83
SREK1-212ENST00000522912 COL4A1P02462 1669 aa20.25■□□□□ 0.83
SREK1-212ENST00000522912 CUL4AQ13619 759 aa20.25■□□□□ 0.83
SREK1-212ENST00000522912 BICDL1Q6ZP65 573 aa20.25■□□□□ 0.83
SREK1-212ENST00000522912 TNPO1Q92973 898 aaKnown RBP20.25■□□□□ 0.83
SREK1-212ENST00000522912 BCL11BQ9C0K0 894 aaPredicted RBP20.25■□□□□ 0.83
SREK1-212ENST00000522912 ABCC12Q96J65 1359 aa20.25■□□□□ 0.83
SREK1-212ENST00000522912 ARAP2Q8WZ64 1704 aa20.24■□□□□ 0.83
SREK1-212ENST00000522912 CPA1P15085 419 aa20.24■□□□□ 0.83
SREK1-212ENST00000522912 CASTP20810 708 aaKnown RBP20.24■□□□□ 0.83
SREK1-212ENST00000522912 ZMYM1Q5SVZ6 1142 aa20.24■□□□□ 0.83
SREK1-212ENST00000522912 JAKMIP1Q96N16 626 aaKnown RBP20.24■□□□□ 0.83
SREK1-212ENST00000522912 RTCBQ9Y3I0 505 aaKnown RBP20.24■□□□□ 0.83
SREK1-212ENST00000522912 FGFR2P21802 821 aa20.24■□□□□ 0.83
SREK1-212ENST00000522912 MCM4P33991 863 aa20.24■□□□□ 0.83
SREK1-212ENST00000522912 TM6SF1Q9BZW5 370 aa20.24■□□□□ 0.83
SREK1-212ENST00000522912 CWC22Q9HCG8 908 aaKnown RBP20.24■□□□□ 0.83
SREK1-212ENST00000522912 HELLSQ9NRZ9 838 aa20.24■□□□□ 0.83
SREK1-212ENST00000522912 RNF113AO15541 343 aaKnown RBP20.23■□□□□ 0.83
SREK1-212ENST00000522912 C4AP0C0L4 1744 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 ZKSCAN1P17029 563 aaPredicted RBP20.23■□□□□ 0.83
SREK1-212ENST00000522912 ZAP70P43403 619 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 COL24A1Q17RW2 1714 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 PI16Q6UXB8 463 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 C3orf67Q6ZVT6 689 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 ARHGEF1Q92888 912 aaKnown RBP20.23■□□□□ 0.83
SREK1-212ENST00000522912 MPHOSPH8Q99549 860 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 ZSWIM6Q9HCJ5 1215 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 MYH7P12883 1935 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 TAF1P21675 1872 aa20.23■□□□□ 0.83
SREK1-212ENST00000522912 TAF6LQ9Y6J9 622 aa20.22■□□□□ 0.83
SREK1-212ENST00000522912 ZPR1O75312 459 aa20.22■□□□□ 0.83
SREK1-212ENST00000522912 SSFA2P28290 1259 aa20.22■□□□□ 0.83
SREK1-212ENST00000522912 MCAMP43121 646 aa20.22■□□□□ 0.83
SREK1-212ENST00000522912 AK2P54819 239 aa20.22■□□□□ 0.83
SREK1-212ENST00000522912 PUM3Q15397 648 aaKnown RBP20.22■□□□□ 0.83
SREK1-212ENST00000522912 LPIN2Q92539 896 aa20.22■□□□□ 0.83
SREK1-212ENST00000522912 ZNF512BQ96KM6 892 aaPredicted RBP20.22■□□□□ 0.83
SREK1-212ENST00000522912 LRRC4BQ9NT99 713 aa20.22■□□□□ 0.83
SREK1-212ENST00000522912 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
SREK1-212ENST00000522912 MYO5AQ9Y4I1 1855 aaKnown RBP20.21■□□□□ 0.83
SREK1-212ENST00000522912 SNAP23O00161 211 aa20.2■□□□□ 0.83
SREK1-212ENST00000522912 IGHMBP2P38935 993 aaKnown RBP20.2■□□□□ 0.83
SREK1-212ENST00000522912 SF3B3Q15393 1217 aaKnown RBP20.2■□□□□ 0.83
SREK1-212ENST00000522912 SLC10A5Q5PT55 438 aa20.2■□□□□ 0.83
SREK1-212ENST00000522912 RUFY3Q7L099 469 aa20.2■□□□□ 0.83
SREK1-212ENST00000522912 PHKA1P46020 1223 aa20.2■□□□□ 0.82
SREK1-212ENST00000522912 COL9A3Q14050 684 aaPredicted RBP20.2■□□□□ 0.82
SREK1-212ENST00000522912 RNF20Q5VTR2 975 aa20.2■□□□□ 0.82
SREK1-212ENST00000522912 CCDC102BQ68D86 513 aa20.2■□□□□ 0.82
SREK1-212ENST00000522912 SETDB2Q96T68 719 aa20.2■□□□□ 0.82
SREK1-212ENST00000522912 CYP46A1Q9Y6A2 500 aa20.2■□□□□ 0.82
SREK1-212ENST00000522912 CYP2E1P05181 493 aaPredicted RBP20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms