RNA–Protein interactions for RNA: ENST00000517126.1

RNU6-1220P-201, Transcript of RNA, U6 small nuclear 1220, pseudogene, humanhuman

BASIC

Gene RNU6-1220P, Length 108 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1220P-201ENST00000517126 OR13H1Q8NG92 308 aa6.12□□□□□ -1.43
RNU6-1220P-201ENST00000517126 NSUN5Q96P11 429 aaKnown RBP6.12□□□□□ -1.43
RNU6-1220P-201ENST00000517126 PRDM6Q9NQX0 595 aa6.12□□□□□ -1.43
RNU6-1220P-201ENST00000517126 ZFATQ9P243 1243 aa6.12□□□□□ -1.43
RNU6-1220P-201ENST00000517126 GRNP28799 593 aaKnown RBP6.11□□□□□ -1.43
RNU6-1220P-201ENST00000517126 MLLT1Q03111 559 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1220P-201ENST00000517126 FAM26DQ5JW98 314 aa6.11□□□□□ -1.43
RNU6-1220P-201ENST00000517126 ZSCAN29Q8IWY8 852 aaPredicted RBP6.11□□□□□ -1.43
RNU6-1220P-201ENST00000517126 MUC3BQ9H195 1237 aa6.11□□□□□ -1.43
RNU6-1220P-201ENST00000517126 CNTNAP5Q8WYK1 1306 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 FZD6O60353 706 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 EDN3P14138 238 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 KCNMA1Q12791 1236 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 TRIM28Q13263 835 aaKnown RBP6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 GJD3Q8N144 294 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 NUDT8Q8WV74 236 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 DMRTB1Q96MA1 342 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 NACC1Q96RE7 527 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 SMG9Q9H0W8 520 aaKnown RBP6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 DCTN4Q9UJW0 460 aa6.1□□□□□ -1.43
RNU6-1220P-201ENST00000517126 APBA3O96018 575 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 ALBP02768 609 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 MAPK1P28482 360 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 SNRPNP63162 240 aaKnown RBP6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 FAM117BQ6P1L5 589 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 HFE2Q6ZVN8 426 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 WFDC8Q8IUA0 241 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 TMEM151AQ8N4L1 468 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 TTC9Q92623 222 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 PLD4Q96BZ4 506 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 MDFIQ99750 246 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 CCDC87Q9NVE4 849 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 TMEM63CQ9P1W3 806 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 AMOTL2Q9Y2J4 779 aa6.09□□□□□ -1.43
RNU6-1220P-201ENST00000517126 TNFRSF21O75509 655 aa6.08□□□□□ -1.44
RNU6-1220P-201ENST00000517126 GDF11O95390 407 aa6.08□□□□□ -1.44
RNU6-1220P-201ENST00000517126 SPATA31C1P0DKV0 1188 aa6.08□□□□□ -1.44
RNU6-1220P-201ENST00000517126 CABP4P57796 275 aa6.08□□□□□ -1.44
RNU6-1220P-201ENST00000517126 PERM1Q5SV97 790 aa6.08□□□□□ -1.44
RNU6-1220P-201ENST00000517126 SRA1Q9HD15 236 aaKnown RBP6.08□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ZBTB7CA1YPR0 619 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 KIF4AO95239 1232 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 PTPRAP18433 802 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ARHGAP4P98171 946 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 RASSF7Q02833 373 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 MAP4K3Q8IVH8 894 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 DTWD1Q8N5C7 304 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 LPIN3Q9BQK8 851 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 PLVAPQ9BX97 442 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 RBCK1Q9BYM8 510 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 GGNBP2Q9H3C7 697 aa6.07□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ZBTB42B2RXF5 422 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 J3QW42 95 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 EIF4EBP3O60516 100 aaPredicted RBP6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 CPNE3O75131 537 aaKnown RBP6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 FGD1P98174 961 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 CEP135Q66GS9 1140 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 MSL1Q68DK7 614 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 GDF6Q6KF10 455 aaPredicted RBP6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 LINC00114Q6XXX2 140 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 C20orf204Q6ZNR8 217 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 KANSL3Q9P2N6 904 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 NAGPAQ9UK23 515 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 STARD13Q9Y3M8 1113 aa6.06□□□□□ -1.44
RNU6-1220P-201ENST00000517126 A6NHS1 94 aa6.05□□□□□ -1.44
RNU6-1220P-201ENST00000517126 AFF1P51825 1210 aaKnown RBP6.05□□□□□ -1.44
RNU6-1220P-201ENST00000517126 C1orf127Q8N9H9 656 aa6.05□□□□□ -1.44
RNU6-1220P-201ENST00000517126 BCL11AQ9H165 835 aa6.05□□□□□ -1.44
RNU6-1220P-201ENST00000517126 DNAJC25Q9H1X3 360 aa6.05□□□□□ -1.44
RNU6-1220P-201ENST00000517126 NID1P14543 1247 aa6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ARL4DP49703 201 aa6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ATP2B2Q01814 1243 aa6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 SND1Q7KZF4 910 aaKnown RBP eCLIP6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 FAM129BQ96TA1 746 aa6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 PBX4Q9BYU1 374 aa6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 PPP4R2Q9NY27 417 aa6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 CNTN3Q9P232 1028 aa6.04□□□□□ -1.44
RNU6-1220P-201ENST00000517126 CYP2E1P05181 493 aaPredicted RBP6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ELNP15502 786 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 CDC27P30260 824 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 NRG1Q02297 640 aaPredicted RBP6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 IL22RA1Q8N6P7 574 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ALKBH8Q96BT7 664 aaKnown RBP6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 RASSF4Q9H2L5 321 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 ZFYVE28Q9HCC9 887 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 NLRP2Q9NX02 1062 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 SALL4Q9UJQ4 1053 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 FOXD3Q9UJU5 478 aaPredicted RBP6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 PPME1Q9Y570 386 aa6.03□□□□□ -1.44
RNU6-1220P-201ENST00000517126 PDE2AO00408 941 aaPredicted RBP6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 EREGO14944 169 aa6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 IGHA1P01876 353 aa6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 PLCB3Q01970 1234 aa6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 C8orf86Q6ZUL3 223 aa6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 DMRTC2Q8IXT2 367 aaPredicted RBP6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 CEP120Q8N960 986 aa6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 DDX54Q8TDD1 881 aaKnown RBP6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 TRIM11Q96F44 468 aa6.02□□□□□ -1.45
RNU6-1220P-201ENST00000517126 DCAF5Q96JK2 942 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms