RNA–Protein interactions for RNA: ENST00000511810.5

SDHA-214, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 2

Gene SDHA, Length 3,001 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-214ENST00000511810 ITGA6P23229 1130 aa12.06□□□□□ -0.48
SDHA-214ENST00000511810 ATP6V1AP38606 617 aa12.06□□□□□ -0.48
SDHA-214ENST00000511810 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
SDHA-214ENST00000511810 BLOC1S2Q6QNY1 142 aa12.06□□□□□ -0.48
SDHA-214ENST00000511810 XAGE2Q96GT9 111 aa12.06□□□□□ -0.48
SDHA-214ENST00000511810 FAM177BA6PVY3 158 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 FKBP4Q02790 459 aaKnown RBP eCLIP12.05□□□□□ -0.48
SDHA-214ENST00000511810 SCARF1Q14162 830 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 HSP90AB3PQ58FF7 597 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 USPL1Q5W0Q7 1092 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 GDPD2Q9HCC8 539 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 RBM27Q9P2N5 1060 aaKnown RBP12.05□□□□□ -0.48
SDHA-214ENST00000511810 SMC3Q9UQE7 1217 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 SPATA31A5Q5VU36 1347 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 SPATA31A7Q8IWB4 1347 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 CDHR2Q9BYE9 1310 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 RFX7Q2KHR2 1363 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 PSMA5P28066 241 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 CTSWP56202 376 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 ITPK1Q13572 414 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 GORABQ5T7V8 394 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 INTS5Q6P9B9 1019 aaKnown RBP12.05□□□□□ -0.48
SDHA-214ENST00000511810 LDHAL6AQ6ZMR3 332 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 CDCA7Q9BWT1 371 aaPredicted RBP12.05□□□□□ -0.48
SDHA-214ENST00000511810 GRPEL1Q9HAV7 217 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 THRAP3Q9Y2W1 955 aaKnown RBP12.05□□□□□ -0.48
SDHA-214ENST00000511810 PALLDQ8WX93 1383 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 MYH3P11055 1940 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 KCNQ2O43526 872 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 CYP21A2P08686 494 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 SYT1P21579 422 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 CRKLP46109 303 aaKnown RBP12.05□□□□□ -0.48
SDHA-214ENST00000511810 PI16Q6UXB8 463 aa12.05□□□□□ -0.48
SDHA-214ENST00000511810 RNF216Q9NWF9 866 aaPredicted RBP12.05□□□□□ -0.48
SDHA-214ENST00000511810 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.05□□□□□ -0.48
SDHA-214ENST00000511810 SLIT2O94813 1529 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 MYH14Q7Z406 1995 aaKnown RBP12.04□□□□□ -0.48
SDHA-214ENST00000511810 A0A0G2JLW4 131 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 RPS6KB1P23443 525 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 GJB2P29033 226 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 EIF5P55010 431 aaKnown RBP12.04□□□□□ -0.48
SDHA-214ENST00000511810 RIPOR2Q9Y4F9 1068 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 WDR33Q9C0J8 1336 aaKnown RBP12.04□□□□□ -0.48
SDHA-214ENST00000511810 RIC1Q4ADV7 1423 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 LOC102724428A0A0B4J2F2 783 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 SIK1P57059 783 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 TOB2Q14106 344 aaPredicted RBP12.04□□□□□ -0.48
SDHA-214ENST00000511810 METTL24Q5JXM2 366 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 TTC39AQ5SRH9 613 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 SH3TC1Q8TE82 1336 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 CCDC87Q9NVE4 849 aa12.04□□□□□ -0.48
SDHA-214ENST00000511810 ERVV-1B6SEH8 477 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 MRE11P49959 708 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 TSGA10IPQ3SY00 556 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 CCDC158Q5M9N0 1113 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 ZMYM1Q5SVZ6 1142 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 ZNF34Q8IZ26 560 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 ZSCAN31Q96LW9 406 aaPredicted RBP12.03□□□□□ -0.48
SDHA-214ENST00000511810 CNNM1Q9NRU3 951 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 HMG20BQ9P0W2 317 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 AKAP2Q9Y2D5 859 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 ANKRD18BA2A2Z9 1011 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 STX6O43752 255 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 SH2B1Q9NRF2 756 aaPredicted RBP12.03□□□□□ -0.48
SDHA-214ENST00000511810 FBXO3Q9UK99 471 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 U3KPZ7 1027 aaPredicted RBP12.03□□□□□ -0.48
SDHA-214ENST00000511810 MAST3O60307 1309 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 HCLS1P14317 486 aaPredicted RBP12.03□□□□□ -0.48
SDHA-214ENST00000511810 ZAP70P43403 619 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 ATP2B3Q16720 1220 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 SUSD4Q5VX71 490 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 STOX1Q6ZVD7 989 aa12.03□□□□□ -0.48
SDHA-214ENST00000511810 M0R2C6 588 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 RNF113AO15541 343 aaKnown RBP12.02□□□□□ -0.49
SDHA-214ENST00000511810 PDE8AO60658 829 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 ZSCAN22P10073 491 aaPredicted RBP12.02□□□□□ -0.49
SDHA-214ENST00000511810 STK3Q13188 491 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 FAM98CQ17RN3 349 aaKnown RBP12.02□□□□□ -0.49
SDHA-214ENST00000511810 NEK1Q96PY6 1258 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 HELLSQ9NRZ9 838 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 KCNQ4P56696 695 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 ZSCAN23Q3MJ62 389 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 HELBQ8NG08 1087 aaPredicted RBP12.02□□□□□ -0.49
SDHA-214ENST00000511810 OSBP2Q969R2 916 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 LRRC2Q9BYS8 371 aa12.02□□□□□ -0.49
SDHA-214ENST00000511810 TOM1O60784 492 aa12.01□□□□□ -0.49
SDHA-214ENST00000511810 GADD45BO75293 160 aaPredicted RBP12.01□□□□□ -0.49
SDHA-214ENST00000511810 TMEM63CQ9P1W3 806 aa12.01□□□□□ -0.49
SDHA-214ENST00000511810 HSPD1P10809 573 aaKnown RBP12.01□□□□□ -0.49
SDHA-214ENST00000511810 TPRNQ4KMQ1 711 aa12.01□□□□□ -0.49
SDHA-214ENST00000511810 LAMA4Q16363 1823 aa12.01□□□□□ -0.49
SDHA-214ENST00000511810 SNAP23O00161 211 aa12□□□□□ -0.49
SDHA-214ENST00000511810 BARGINQ6ZT62 677 aa12□□□□□ -0.49
SDHA-214ENST00000511810 VGLL2Q8N8G2 317 aa12□□□□□ -0.49
SDHA-214ENST00000511810 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12□□□□□ -0.49
SDHA-214ENST00000511810 C8orf37Q96NL8 207 aa12□□□□□ -0.49
SDHA-214ENST00000511810 CNPY2Q9Y2B0 182 aa12□□□□□ -0.49
SDHA-214ENST00000511810 CAMTA2O94983 1202 aa12□□□□□ -0.49
SDHA-214ENST00000511810 F13A1P00488 732 aa12□□□□□ -0.49
SDHA-214ENST00000511810 MCAMP43121 646 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms