RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 PXYLP1Q8TE99 480 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 EVI5LQ96CN4 794 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 FUCA2Q9BTY2 467 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 NUP62CLQ9H1M0 184 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 ALDH8A1Q9H2A2 487 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 TMEM134Q9H6X4 195 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 TTC12Q9H892 705 aaPredicted RBP5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 GDPD2Q9HCC8 539 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 CGNQ9P2M7 1197 aaKnown RBP5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 ACEP12821 1306 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 MAP3K19Q56UN5 1328 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 NPHP3Q7Z494 1330 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 IGSF1Q8N6C5 1336 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 METP08581 1390 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 PTPRUQ92729 1446 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 LRRC37A3O60309 1634 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 TOPAZ1Q8N9V7 1692 aa5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 FAM208AQ9UK61 1670 aaKnown RBP5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 XRN1Q8IZH2 1706 aaKnown RBP5.88□□□□□ -1.47
HMGB3P16-201ENST00000508037 CTAGE5O15320 804 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 ALDH1L1O75891 902 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 TUBB4AP04350 444 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 FECHP22830 423 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 GJB2P29033 226 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 KCNJ4P48050 445 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 GABPB1Q06547 395 aaPredicted RBP5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 KRT32Q14532 448 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 HSP90AB2PQ58FF8 381 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 HDGFL1Q5TGJ6 251 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 LARP1BQ659C4 914 aaKnown RBP5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 RUFY3Q7L099 469 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 PPP1R42Q7Z4L9 355 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 METTL3Q86U44 580 aaKnown RBP5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 CREBRFQ8IUR6 639 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 DRC7Q8IY82 874 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 PI4K2BQ8TCG2 481 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 ANKRD7Q92527 254 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 JAKMIP1Q96N16 626 aaKnown RBP5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 PRR14Q9BWN1 585 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 USP44Q9H0E7 712 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 TNMDQ9H2S6 317 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 ECHDC1Q9NTX5 307 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 HYPKQ9NX55 129 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 OGFRQ9NZT2 677 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 HMG20BQ9P0W2 317 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 MTMR6Q9Y217 621 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 NRXN3Q9Y4C0 1643 aa5.87□□□□□ -1.47
HMGB3P16-201ENST00000508037 PRR36Q9H6K5 1346 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 VPS37CA5D8V6 355 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 SRGAP3O43295 1099 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 NRDCO43847 1150 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 GIGYF1O75420 1035 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 IFIT2P09913 472 aaKnown RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 DNM1Q05193 864 aaKnown RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 TYRO3Q06418 890 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 MTX1Q13505 466 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 FOXD4L6Q3SYB3 417 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 TSHZ3Q63HK5 1081 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 ATL3Q6DD88 541 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 GIMAP6Q6P9H5 292 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 FOXD4L3Q6VB84 417 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 NUTM1Q86Y26 1132 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 UNC5CLQ8IV45 518 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 CCDC83Q8IWF9 413 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 CCDC112Q8NEF3 446 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 TDRD7Q8NHU6 1098 aaKnown RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 CHAMP1Q96JM3 812 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 CLSTN2Q9H4D0 955 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 ZSCAN16Q9H4T2 348 aaPredicted RBP5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 IL1RAPL2Q9NP60 686 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 MIS18AQ9NYP9 233 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 CFAP45Q9UL16 551 aa5.86□□□□□ -1.47
HMGB3P16-201ENST00000508037 FMN2Q9NZ56 1722 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 TNRQ92752 1358 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 PLEKHG1Q9ULL1 1385 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 GOLGA6L19H0YKK7 550 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 ZSCAN20P17040 1043 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 APLP1P51693 650 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 ZNF75DP51815 510 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 BLOC1S2Q6QNY1 142 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 CWC27Q6UX04 472 aaKnown RBP5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 RBM43Q6ZSC3 357 aaKnown RBP5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 TICAM2Q86XR7 235 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 DNAAF4Q8WXU2 420 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 SPATA32Q96LK8 384 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 ZNF830Q96NB3 372 aaPredicted RBP5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 TRIM5Q9C035 493 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 SNRKQ9NRH2 765 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 CHD2O14647 1828 aaKnown RBP5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 PEAK1Q9H792 1746 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 CRYBG1Q9Y4K1 1723 aa5.85□□□□□ -1.47
HMGB3P16-201ENST00000508037 DIP2AQ14689 1571 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 ANKARQ7Z5J8 1434 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 RFX7Q2KHR2 1363 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 ROBO2Q9HCK4 1378 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 TMEM2Q9UHN6 1383 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 FOXO3O43524 673 aa5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 DDX58O95786 925 aaKnown RBP5.84□□□□□ -1.47
HMGB3P16-201ENST00000508037 ZNF165P49910 485 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms