RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 H3BRB1 525 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 GHRHP01286 108 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 CYP2E1P05181 493 aaPredicted RBP6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 MZF1P28698 734 aaPredicted RBP6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 FKBP4Q02790 459 aaKnown RBP eCLIP6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 AAMPQ13685 434 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 C8orf34Q49A92 452 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 PRRT3Q5FWE3 981 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 TTC39BQ5VTQ0 682 aaPredicted RBP6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 ALKBH2Q6NS38 261 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 ZNF438Q7Z4V0 828 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 PLD4Q96BZ4 506 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 SPOCK3Q9BQ16 436 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 GGNBP2Q9H3C7 697 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 TUT1Q9H6E5 874 aaKnown RBP6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 ELP3Q9H9T3 547 aa6.97□□□□□ -1.29
PDLIM1P4-201ENST00000504327 A0A0A0MRY4 1105 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 C1QTNF9BB2RNN3 333 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 FZD6O60353 706 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 FAM13AO94988 1023 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 PROCP04070 461 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 PCSK2P16519 638 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 PDE12Q6L8Q7 609 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CD163Q86VB7 1156 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 DMRTC2Q8IXT2 367 aaPredicted RBP6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 KANSL3Q9P2N6 904 aa6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CCDC9Q9Y3X0 531 aaKnown RBP6.96□□□□□ -1.3
PDLIM1P4-201ENST00000504327 MSTNO14793 375 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ICMTO60725 284 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 IGHA1P01876 353 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 HYAL2Q12891 473 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 TRIM28Q13263 835 aaKnown RBP6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 GRIK4Q16099 956 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 GLYCTKQ8IVS8 523 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CCDC87Q9NVE4 849 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CNTN3Q9P232 1028 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 EGFL7Q9UHF1 273 aa6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.95□□□□□ -1.3
PDLIM1P4-201ENST00000504327 RPLP1P05386 114 aaKnown RBP6.94□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ATP11AP98196 1134 aa6.94□□□□□ -1.3
PDLIM1P4-201ENST00000504327 MSL1Q68DK7 614 aa6.94□□□□□ -1.3
PDLIM1P4-201ENST00000504327 GDF6Q6KF10 455 aaPredicted RBP6.94□□□□□ -1.3
PDLIM1P4-201ENST00000504327 TXNDC2Q86VQ3 553 aa6.94□□□□□ -1.3
PDLIM1P4-201ENST00000504327 TTC9Q92623 222 aa6.94□□□□□ -1.3
PDLIM1P4-201ENST00000504327 RBSNQ9H1K0 784 aa6.94□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ZBTB7CA1YPR0 619 aa6.93□□□□□ -1.3
PDLIM1P4-201ENST00000504327 RAC1P63000 192 aa6.93□□□□□ -1.3
PDLIM1P4-201ENST00000504327 PDE4CQ08493 712 aa6.93□□□□□ -1.3
PDLIM1P4-201ENST00000504327 WFDC8Q8IUA0 241 aa6.93□□□□□ -1.3
PDLIM1P4-201ENST00000504327 C1orf127Q8N9H9 656 aa6.93□□□□□ -1.3
PDLIM1P4-201ENST00000504327 TTC16Q8NEE8 873 aa6.93□□□□□ -1.3
PDLIM1P4-201ENST00000504327 TRIM33Q9UPN9 1127 aa6.93□□□□□ -1.3
PDLIM1P4-201ENST00000504327 KIF4AO95239 1232 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 APBA3O96018 575 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ECM1Q16610 540 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 XKR5Q6UX68 686 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ILDR2Q71H61 639 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 FMR1NBQ8N0W7 255 aaPredicted RBP6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 GJD3Q8N144 294 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 SPACA7Q96KW9 195 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CHRDQ9H2X0 955 aa6.92□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ACPPP15309 386 aa6.91□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ELNP15502 786 aa6.91□□□□□ -1.3
PDLIM1P4-201ENST00000504327 BAG6P46379 1132 aa6.91□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CEP135Q66GS9 1140 aa6.91□□□□□ -1.3
PDLIM1P4-201ENST00000504327 SHISA2Q6UWI4 295 aa6.91□□□□□ -1.3
PDLIM1P4-201ENST00000504327 NCAPG2Q86XI2 1143 aa6.91□□□□□ -1.3
PDLIM1P4-201ENST00000504327 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
PDLIM1P4-201ENST00000504327 SELPP16109 830 aa6.9□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CES1P23141 567 aa6.9□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ARHGAP4P98171 946 aa6.9□□□□□ -1.3
PDLIM1P4-201ENST00000504327 ADAMTSL4Q6UY14 1074 aa6.9□□□□□ -1.3
PDLIM1P4-201ENST00000504327 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
PDLIM1P4-201ENST00000504327 CEP120Q8N960 986 aa6.9□□□□□ -1.3
PDLIM1P4-201ENST00000504327 PHACTR2O75167 634 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 DEAF1O75398 565 aaPredicted RBP6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 TNFRSF21O75509 655 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 USP5P45974 858 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 EHHADHQ08426 723 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 CCER1Q8TC90 406 aaPredicted RBP6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 SNX29Q8TEQ0 813 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 NACC1Q96RE7 527 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 LACRTQ9GZZ8 138 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 SALL4Q9UJQ4 1053 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 ABCC9O60706 1549 aa6.89□□□□□ -1.31
PDLIM1P4-201ENST00000504327 EREGO14944 169 aa6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 TRPA1O75762 1119 aa6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 SMNDC1O75940 238 aaKnown RBP eCLIP6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 GATA4P43694 442 aa6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 DTWD1Q8N5C7 304 aa6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 PBX4Q9BYU1 374 aa6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 BRPF3Q9ULD4 1205 aa6.88□□□□□ -1.31
PDLIM1P4-201ENST00000504327 BRD1O95696 1058 aa6.87□□□□□ -1.31
PDLIM1P4-201ENST00000504327 PDIA4P13667 645 aaKnown RBP6.87□□□□□ -1.31
PDLIM1P4-201ENST00000504327 FBXO11Q86XK2 927 aa6.87□□□□□ -1.31
PDLIM1P4-201ENST00000504327 TTBK1Q5TCY1 1321 aaPredicted RBP6.86□□□□□ -1.31
PDLIM1P4-201ENST00000504327 SOWAHDA6NJG2 315 aa6.86□□□□□ -1.31
PDLIM1P4-201ENST00000504327 C9orf172C9J069 976 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms