RNA–Protein interactions for RNA: ENST00000502288.5

CLDND1-205, Transcript of claudin domain containing 1, humanhuman

TSL 4 BASIC

Gene CLDND1, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-205ENST00000502288 POLLQ9UGP5 575 aa10.68□□□□□ -0.7
CLDND1-205ENST00000502288 NUDCQ9Y266 331 aa10.68□□□□□ -0.7
CLDND1-205ENST00000502288 HTTP42858 3142 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 SH3TC1Q8TE82 1336 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 CLSPNQ9HAW4 1339 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 UBE2Q2LH0YL09 131 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 DLL1O00548 723 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 RIMBP2O15034 1052 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 HCLS1P14317 486 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-205ENST00000502288 INHBEP58166 350 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 SF3B3Q15393 1217 aaKnown RBP10.67□□□□□ -0.7
CLDND1-205ENST00000502288 NLRP10Q86W26 655 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 ARMC5Q96C12 935 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 CFAP53Q96M91 514 aa10.67□□□□□ -0.7
CLDND1-205ENST00000502288 ZNF646O15015 1829 aaPredicted RBP10.67□□□□□ -0.7
CLDND1-205ENST00000502288 C6orf229H3BNL8 230 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 PDIA6Q15084 440 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 DOK7Q18PE1 504 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 MOB2Q70IA6 237 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 OTOP1Q7RTM1 612 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 TBC1D16Q8TBP0 767 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 ZC3H12CQ9C0D7 883 aaKnown RBP10.66□□□□□ -0.7
CLDND1-205ENST00000502288 R3HDMLQ9H3Y0 253 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 PODXL2Q9NZ53 605 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 PTPN22Q9Y2R2 807 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 TRIM17Q9Y577 477 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 CEP290O15078 2479 aa10.66□□□□□ -0.7
CLDND1-205ENST00000502288 CENPFP49454 3210 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 SZT2Q5T011 3432 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 TRIOBPQ9H2D6 2365 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 GPSM2P81274 684 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 RSBN1LQ6PCB5 846 aaPredicted RBP10.65□□□□□ -0.7
CLDND1-205ENST00000502288 CELF1Q92879 486 aaKnown RBP10.65□□□□□ -0.7
CLDND1-205ENST00000502288 OTUD5Q96G74 571 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 GMLQ99445 158 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 MYOZ2Q9NPC6 264 aa10.65□□□□□ -0.7
CLDND1-205ENST00000502288 TRMT112Q9UI30 125 aaKnown RBP10.65□□□□□ -0.7
CLDND1-205ENST00000502288 COL4A1P02462 1669 aa10.64□□□□□ -0.71
CLDND1-205ENST00000502288 USP17L8P0C7I0 530 aa10.64□□□□□ -0.71
CLDND1-205ENST00000502288 U2AF1L5P0DN76 240 aaPredicted RBP10.64□□□□□ -0.71
CLDND1-205ENST00000502288 EN2P19622 333 aaPredicted RBP10.64□□□□□ -0.71
CLDND1-205ENST00000502288 NF2P35240 595 aa10.64□□□□□ -0.71
CLDND1-205ENST00000502288 U2AF1Q01081 240 aaKnown RBP eCLIP10.64□□□□□ -0.71
CLDND1-205ENST00000502288 ERO1AQ96HE7 468 aa10.64□□□□□ -0.71
CLDND1-205ENST00000502288 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
CLDND1-205ENST00000502288 MANSC4A6NHS7 340 aaPredicted RBP10.63□□□□□ -0.71
CLDND1-205ENST00000502288 MMP14P50281 582 aa10.63□□□□□ -0.71
CLDND1-205ENST00000502288 LDLRAD1Q5T700 205 aa10.63□□□□□ -0.71
CLDND1-205ENST00000502288 SPRYD7Q5W111 196 aa10.63□□□□□ -0.71
CLDND1-205ENST00000502288 THUMPD2Q9BTF0 503 aaKnown RBP10.63□□□□□ -0.71
CLDND1-205ENST00000502288 TMEM106CQ9BVX2 250 aa10.63□□□□□ -0.71
CLDND1-205ENST00000502288 BRCA2P51587 3418 aa10.63□□□□□ -0.71
CLDND1-205ENST00000502288 RPS8P62241 208 aaKnown RBP10.62□□□□□ -0.71
CLDND1-205ENST00000502288 PTPN12Q05209 780 aaKnown RBP10.62□□□□□ -0.71
CLDND1-205ENST00000502288 TTLL12Q14166 644 aaPredicted RBP10.62□□□□□ -0.71
CLDND1-205ENST00000502288 COPS6Q7L5N1 327 aa10.62□□□□□ -0.71
CLDND1-205ENST00000502288 ARMC9Q7Z3E5 817 aa10.62□□□□□ -0.71
CLDND1-205ENST00000502288 PODNQ7Z5L7 613 aa10.62□□□□□ -0.71
CLDND1-205ENST00000502288 IFNL1Q8IU54 200 aa10.62□□□□□ -0.71
CLDND1-205ENST00000502288 SLC17A8Q8NDX2 589 aa10.62□□□□□ -0.71
CLDND1-205ENST00000502288 UNCXA6NJT0 531 aa10.61□□□□□ -0.71
CLDND1-205ENST00000502288 G3V3G9 751 aa10.61□□□□□ -0.71
CLDND1-205ENST00000502288 ZBTB48P10074 688 aaPredicted RBP10.61□□□□□ -0.71
CLDND1-205ENST00000502288 DCAF8Q5TAQ9 597 aa10.61□□□□□ -0.71
CLDND1-205ENST00000502288 PRAMEF18Q5VWM3 479 aa10.61□□□□□ -0.71
CLDND1-205ENST00000502288 USP17L3A6NCW0 530 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 USP17L4A6NCW7 530 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
CLDND1-205ENST00000502288 MAP3K11Q16584 847 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 PROSER3Q2NL68 480 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 NBPF9Q3BBW0 867 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 USP17L1Q7RTZ2 530 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 ZNF333Q96JL9 665 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 EFCC1Q9HA90 598 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 BABAM1Q9NWV8 329 aa10.6□□□□□ -0.71
CLDND1-205ENST00000502288 H0YGN5 161 aa10.59□□□□□ -0.71
CLDND1-205ENST00000502288 WNT10BO00744 389 aa10.59□□□□□ -0.71
CLDND1-205ENST00000502288 NEFMP07197 916 aa10.59□□□□□ -0.71
CLDND1-205ENST00000502288 EIF2S2P20042 333 aaKnown RBP10.59□□□□□ -0.71
CLDND1-205ENST00000502288 OTUD7BQ6GQQ9 843 aa10.59□□□□□ -0.71
CLDND1-205ENST00000502288 NBPF11Q86T75 865 aa10.59□□□□□ -0.71
CLDND1-205ENST00000502288 ISCA1Q9BUE6 129 aa10.59□□□□□ -0.71
CLDND1-205ENST00000502288 GGA1Q9UJY5 639 aa10.59□□□□□ -0.71
CLDND1-205ENST00000502288 COL1A1P02452 1464 aaPredicted RBP10.59□□□□□ -0.71
CLDND1-205ENST00000502288 MYO3BQ8WXR4 1341 aa10.58□□□□□ -0.71
CLDND1-205ENST00000502288 IGF2BP3O00425 579 aaKnown RBP eCLIP10.58□□□□□ -0.72
CLDND1-205ENST00000502288 UFL1O94874 794 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 ANXA1P04083 346 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 SP3Q02447 781 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 ARHGEF6Q15052 776 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 OGFOD1Q8N543 542 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 CD99L2Q8TCZ2 262 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 XAGE3Q8WTP9 111 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 FAM89AQ96GI7 184 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 SCAF8Q9UPN6 1271 aaKnown RBP10.58□□□□□ -0.72
CLDND1-205ENST00000502288 CUL9Q8IWT3 2517 aa10.58□□□□□ -0.72
CLDND1-205ENST00000502288 TESPA1A2RU30 521 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-205ENST00000502288 MNX1P50219 401 aaPredicted RBP10.57□□□□□ -0.72
CLDND1-205ENST00000502288 AIMP1Q12904 312 aaKnown RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms