RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 ABI2Q9NYB9 513 aaPredicted RBP10.48□□□□□ -0.73
MDM2-220ENST00000496959 FAM13AO94988 1023 aa10.47□□□□□ -0.73
MDM2-220ENST00000496959 ABL1P00519 1130 aa10.47□□□□□ -0.73
MDM2-220ENST00000496959 CHRNA4P43681 627 aa10.47□□□□□ -0.73
MDM2-220ENST00000496959 MTMR3Q13615 1198 aa10.47□□□□□ -0.73
MDM2-220ENST00000496959 MSL1Q68DK7 614 aa10.47□□□□□ -0.73
MDM2-220ENST00000496959 DMRTC2Q8IXT2 367 aaPredicted RBP10.47□□□□□ -0.73
MDM2-220ENST00000496959 A0A0A0MRY4 1105 aa10.46□□□□□ -0.73
MDM2-220ENST00000496959 MZF1P28698 734 aaPredicted RBP10.46□□□□□ -0.73
MDM2-220ENST00000496959 FKBP4Q02790 459 aaKnown RBP eCLIP10.46□□□□□ -0.73
MDM2-220ENST00000496959 HYAL2Q12891 473 aa10.46□□□□□ -0.73
MDM2-220ENST00000496959 GRIK5Q16478 980 aa10.46□□□□□ -0.73
MDM2-220ENST00000496959 ZNF438Q7Z4V0 828 aa10.46□□□□□ -0.73
MDM2-220ENST00000496959 PLD4Q96BZ4 506 aa10.46□□□□□ -0.73
MDM2-220ENST00000496959 SPACA7Q96KW9 195 aa10.46□□□□□ -0.73
MDM2-220ENST00000496959 PDGFAP04085 211 aa10.45□□□□□ -0.74
MDM2-220ENST00000496959 NPR3P17342 541 aa10.45□□□□□ -0.74
MDM2-220ENST00000496959 WFDC8Q8IUA0 241 aa10.45□□□□□ -0.74
MDM2-220ENST00000496959 ELP3Q9H9T3 547 aa10.45□□□□□ -0.74
MDM2-220ENST00000496959 GRIK4Q16099 956 aa10.44□□□□□ -0.74
MDM2-220ENST00000496959 C8orf34Q49A92 452 aa10.44□□□□□ -0.74
MDM2-220ENST00000496959 XKR5Q6UX68 686 aa10.44□□□□□ -0.74
MDM2-220ENST00000496959 RETREG2Q8NC44 543 aa10.44□□□□□ -0.74
MDM2-220ENST00000496959 ELNP15502 786 aa10.43□□□□□ -0.74
MDM2-220ENST00000496959 DTWD1Q8N5C7 304 aa10.43□□□□□ -0.74
MDM2-220ENST00000496959 GATA4P43694 442 aa10.42□□□□□ -0.74
MDM2-220ENST00000496959 BAG6P46379 1132 aa10.42□□□□□ -0.74
MDM2-220ENST00000496959 ZNF211Q13398 564 aaPredicted RBP10.42□□□□□ -0.74
MDM2-220ENST00000496959 GGNBP2Q9H3C7 697 aa10.42□□□□□ -0.74
MDM2-220ENST00000496959 ANO2Q9NQ90 1003 aa10.42□□□□□ -0.74
MDM2-220ENST00000496959 TMEM63CQ9P1W3 806 aa10.42□□□□□ -0.74
MDM2-220ENST00000496959 EGFL7Q9UHF1 273 aa10.42□□□□□ -0.74
MDM2-220ENST00000496959 POLIQ9UNA4 740 aa10.42□□□□□ -0.74
MDM2-220ENST00000496959 C9orf172C9J069 976 aa10.41□□□□□ -0.74
MDM2-220ENST00000496959 USP5P45974 858 aa10.41□□□□□ -0.74
MDM2-220ENST00000496959 GDF6Q6KF10 455 aaPredicted RBP10.41□□□□□ -0.74
MDM2-220ENST00000496959 ILDR2Q71H61 639 aa10.41□□□□□ -0.74
MDM2-220ENST00000496959 FMR1NBQ8N0W7 255 aaPredicted RBP10.41□□□□□ -0.74
MDM2-220ENST00000496959 KIF4AO95239 1232 aa10.4□□□□□ -0.74
MDM2-220ENST00000496959 COL13A1Q5TAT6 717 aaPredicted RBP10.4□□□□□ -0.74
MDM2-220ENST00000496959 CACTIN-AS1Q8N1I8 211 aa10.4□□□□□ -0.74
MDM2-220ENST00000496959 EHHADHQ08426 723 aa10.39□□□□□ -0.75
MDM2-220ENST00000496959 NCAPG2Q86XI2 1143 aa10.39□□□□□ -0.75
MDM2-220ENST00000496959 PMEPA1Q969W9 287 aa10.39□□□□□ -0.75
MDM2-220ENST00000496959 A6NHS1 94 aa10.38□□□□□ -0.75
MDM2-220ENST00000496959 ICMTO60725 284 aa10.38□□□□□ -0.75
MDM2-220ENST00000496959 SMNDC1O75940 238 aaKnown RBP eCLIP10.38□□□□□ -0.751e-7■■□□□ 13.3
MDM2-220ENST00000496959 CYP2E1P05181 493 aaPredicted RBP10.38□□□□□ -0.75
MDM2-220ENST00000496959 IL22RA1Q8N6P7 574 aa10.38□□□□□ -0.75
MDM2-220ENST00000496959 SELPP16109 830 aa10.37□□□□□ -0.75
MDM2-220ENST00000496959 CES1P23141 567 aa10.37□□□□□ -0.75
MDM2-220ENST00000496959 NRG1Q02297 640 aaPredicted RBP10.37□□□□□ -0.75
MDM2-220ENST00000496959 CEP135Q66GS9 1140 aa10.37□□□□□ -0.75
MDM2-220ENST00000496959 FBXO11Q86XK2 927 aa10.37□□□□□ -0.75
MDM2-220ENST00000496959 GLYCTKQ8IVS8 523 aa10.37□□□□□ -0.75
MDM2-220ENST00000496959 LENG1Q96BZ8 264 aaPredicted RBP10.37□□□□□ -0.75
MDM2-220ENST00000496959 CNTN3Q9P232 1028 aa10.37□□□□□ -0.75
MDM2-220ENST00000496959 TRIM33Q9UPN9 1127 aa10.37□□□□□ -0.75
MDM2-220ENST00000496959 FZD6O60353 706 aa10.36□□□□□ -0.75
MDM2-220ENST00000496959 SERPINB4P48594 390 aa10.36□□□□□ -0.75
MDM2-220ENST00000496959 C1orf127Q8N9H9 656 aa10.36□□□□□ -0.75
MDM2-220ENST00000496959 KANSL3Q9P2N6 904 aa10.36□□□□□ -0.75
MDM2-220ENST00000496959 H3BRB1 525 aa10.35□□□□□ -0.75
MDM2-220ENST00000496959 ATP11AP98196 1134 aa10.35□□□□□ -0.75
MDM2-220ENST00000496959 MUC3BQ9H195 1237 aa10.35□□□□□ -0.75
MDM2-220ENST00000496959 RASSF4Q9H2L5 321 aa10.35□□□□□ -0.75
MDM2-220ENST00000496959 TUT1Q9H6E5 874 aaKnown RBP10.35□□□□□ -0.75
MDM2-220ENST00000496959 USP21Q9UK80 565 aa10.35□□□□□ -0.75
MDM2-220ENST00000496959 ADGRE1Q14246 886 aa10.34□□□□□ -0.75
MDM2-220ENST00000496959 SHISA2Q6UWI4 295 aa10.34□□□□□ -0.75
MDM2-220ENST00000496959 CEP120Q8N960 986 aa10.34□□□□□ -0.75
MDM2-220ENST00000496959 CCER1Q8TC90 406 aaPredicted RBP10.34□□□□□ -0.75
MDM2-220ENST00000496959 PBX4Q9BYU1 374 aa10.34□□□□□ -0.75
MDM2-220ENST00000496959 SRA1Q9HD15 236 aaKnown RBP10.34□□□□□ -0.75
MDM2-220ENST00000496959 CCDC87Q9NVE4 849 aa10.34□□□□□ -0.75
MDM2-220ENST00000496959 SALL4Q9UJQ4 1053 aa10.34□□□□□ -0.75
MDM2-220ENST00000496959 FAM177BA6PVY3 158 aa10.33□□□□□ -0.76
MDM2-220ENST00000496959 DOC2BQ14184 412 aa10.33□□□□□ -0.76
MDM2-220ENST00000496959 SUZ12Q15022 739 aaKnown RBP10.33□□□□□ -0.76
MDM2-220ENST00000496959 TXNDC2Q86VQ3 553 aa10.33□□□□□ -0.76
MDM2-220ENST00000496959 DCAF11Q8TEB1 546 aa10.33□□□□□ -0.76
MDM2-220ENST00000496959 PPME1Q9Y570 386 aa10.33□□□□□ -0.76
MDM2-220ENST00000496959 PHACTR2O75167 634 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 FURINP09958 794 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 MBTPS1Q14703 1052 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 IGF2-ASQ6U949 168 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 MAP4K3Q8IVH8 894 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 GJD3Q8N144 294 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 SNX29Q8TEQ0 813 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 LACRTQ9GZZ8 138 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 BRPF3Q9ULD4 1205 aa10.32□□□□□ -0.76
MDM2-220ENST00000496959 K7ELQ4 463 aaPredicted RBP10.31□□□□□ -0.76
MDM2-220ENST00000496959 ADAM23O75077 832 aa10.31□□□□□ -0.76
MDM2-220ENST00000496959 DEAF1O75398 565 aaPredicted RBP10.31□□□□□ -0.76
MDM2-220ENST00000496959 TNFRSF21O75509 655 aa10.31□□□□□ -0.76
MDM2-220ENST00000496959 CDC27P30260 824 aa10.31□□□□□ -0.76
MDM2-220ENST00000496959 TXNRD3Q86VQ6 643 aa10.31□□□□□ -0.76
MDM2-220ENST00000496959 CHRDQ9H2X0 955 aa10.31□□□□□ -0.76
MDM2-220ENST00000496959 PTPRAP18433 802 aa10.29□□□□□ -0.76
MDM2-220ENST00000496959 LINC01387J3KSC0 135 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms