RNA–Protein interactions for RNA: ENST00000496323.1

SPTBN1-205, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTBN1, Length 2,225 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-205ENST00000496323 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
SPTBN1-205ENST00000496323 RFX7Q2KHR2 1363 aa16.52■□□□□ 0.24
SPTBN1-205ENST00000496323 LY75O60449 1722 aa16.52■□□□□ 0.23
SPTBN1-205ENST00000496323 SBF2Q86WG5 1849 aa16.52■□□□□ 0.23
SPTBN1-205ENST00000496323 ST18O60284 1047 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 IFIT1P09914 478 aaKnown RBP16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 HSP90B1P14625 803 aaKnown RBP16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 NEK4P51957 841 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 SNX14Q9Y5W7 946 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 CCDC171Q6TFL3 1326 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 AK9Q5TCS8 1911 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 ZPR1O75312 459 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 SCARF1Q14162 830 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 NFKBIBQ15653 356 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 CCDC158Q5M9N0 1113 aa16.51■□□□□ 0.23
SPTBN1-205ENST00000496323 TRIM37O94972 964 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 MAP4K1Q92918 833 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 SCN7AQ01118 1682 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 MROH5Q6ZUA9 1318 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 NECTIN1Q15223 517 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 TTC39AQ5SRH9 613 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 GORABQ5T7V8 394 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 HELBQ8NG08 1087 aaPredicted RBP16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 KCNB2Q92953 911 aa16.5■□□□□ 0.23
SPTBN1-205ENST00000496323 DDX60Q8IY21 1712 aaKnown RBP16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 FGFR2P21802 821 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 SLFNL1Q499Z3 407 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 SETDB2Q96T68 719 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 SEC62Q99442 399 aaKnown RBP16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 UPF3BQ9BZI7 483 aaKnown RBP16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 FOXD4L1Q9NU39 408 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 ABCC12Q96J65 1359 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 PHF14O94880 888 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 RBM6P78332 1123 aaKnown RBP16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 SF3B3Q15393 1217 aaKnown RBP16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 TRAPPC3LQ5T215 181 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 MPHOSPH8Q99549 860 aa16.49■□□□□ 0.23
SPTBN1-205ENST00000496323 C4BP0C0L5 1744 aa16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 TAF5LO75529 589 aa16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 ZNF772Q68DY9 489 aaPredicted RBP16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 PRPF40BQ6NWY9 871 aaKnown RBP16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 CHMP5Q9NZZ3 219 aa16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 RBM8AQ9Y5S9 174 aaKnown RBP16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 MYH3P11055 1940 aa16.48■□□□□ 0.23
SPTBN1-205ENST00000496323 SNAP23O00161 211 aa16.47■□□□□ 0.23
SPTBN1-205ENST00000496323 PUM3Q15397 648 aaKnown RBP16.47■□□□□ 0.23
SPTBN1-205ENST00000496323 PI16Q6UXB8 463 aa16.47■□□□□ 0.23
SPTBN1-205ENST00000496323 COL4A1P02462 1669 aa16.47■□□□□ 0.23
SPTBN1-205ENST00000496323 RFC4P35249 363 aa16.47■□□□□ 0.23
SPTBN1-205ENST00000496323 CCDC129Q6ZRS4 1044 aa16.47■□□□□ 0.23
SPTBN1-205ENST00000496323 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
SPTBN1-205ENST00000496323 FRAT2O75474 233 aaPredicted RBP16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 HSP90AA1P07900 732 aaKnown RBP16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 IGHMBP2P38935 993 aaKnown RBP16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 MCAMP43121 646 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 SLC27A3Q5K4L6 730 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 NBPF5PQ86XG9 351 aaPredicted RBP16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 PROM2Q8N271 834 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 LPIN2Q92539 896 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 ZNF512BQ96KM6 892 aaPredicted RBP16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 NYXQ9GZU5 481 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 ZAP70P43403 619 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 CREB3L3Q68CJ9 461 aa16.46■□□□□ 0.23
SPTBN1-205ENST00000496323 TAF1LQ8IZX4 1826 aa16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 GTF2E1P29083 439 aaPredicted RBP16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 PHKA1P46020 1223 aa16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 ZMYM1Q5SVZ6 1142 aa16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 CCDC102BQ68D86 513 aa16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 RNF113AO15541 343 aaKnown RBP16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 CCDC24Q8N4L8 307 aa16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 TTC14Q96N46 770 aa16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 CDC5LQ99459 802 aaKnown RBP16.45■□□□□ 0.22
SPTBN1-205ENST00000496323 LAMB2P55268 1798 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 BRWD3Q6RI45 1802 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 SLC27A2O14975 620 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 ADRA2BP18089 450 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 MCM2P49736 904 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 CHRNDQ07001 517 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 TPTE2Q6XPS3 522 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 TMX3Q96JJ7 454 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 HELLSQ9NRZ9 838 aa16.44■□□□□ 0.22
SPTBN1-205ENST00000496323 ARID4AP29374 1257 aaPredicted RBP16.43■□□□□ 0.22
SPTBN1-205ENST00000496323 NFIXQ14938 502 aa16.43■□□□□ 0.22
SPTBN1-205ENST00000496323 CIZ1Q9ULV3 898 aaPredicted RBP16.43■□□□□ 0.22
SPTBN1-205ENST00000496323 TAF6LQ9Y6J9 622 aa16.43■□□□□ 0.22
SPTBN1-205ENST00000496323 CPA1P15085 419 aa16.43■□□□□ 0.22
SPTBN1-205ENST00000496323 SSFA2P28290 1259 aa16.43■□□□□ 0.22
SPTBN1-205ENST00000496323 KCNJ4P48050 445 aa16.43■□□□□ 0.22
SPTBN1-205ENST00000496323 SLC5A1P13866 664 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 ANKRD18AQ8IVF6 992 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 CELF1Q92879 486 aaKnown RBP16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 TM6SF1Q9BZW5 370 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 COL24A1Q17RW2 1714 aa16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 CYP2E1P05181 493 aaPredicted RBP16.42■□□□□ 0.22
SPTBN1-205ENST00000496323 CASTP20810 708 aaKnown RBP16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms