RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 HSP90AB4PQ58FF6 505 aa16.56■□□□□ 0.24
COPS7B-221ENST00000488111 MTERF4Q7Z6M4 381 aaKnown RBP16.56■□□□□ 0.24
COPS7B-221ENST00000488111 SMAP1Q8IYB5 467 aaPredicted RBP16.56■□□□□ 0.24
COPS7B-221ENST00000488111 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.56■□□□□ 0.24
COPS7B-221ENST00000488111 NPHP1O15259 732 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 SASH1O94885 1247 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 BAG4O95429 457 aaKnown RBP16.55■□□□□ 0.24
COPS7B-221ENST00000488111 KIF1BPQ96EK5 621 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 FAM13BQ9NYF5 915 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 DDX49Q9Y6V7 483 aaKnown RBP16.55■□□□□ 0.24
COPS7B-221ENST00000488111 ITGA6P23229 1130 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 IFIT5Q13325 482 aaKnown RBP16.55■□□□□ 0.24
COPS7B-221ENST00000488111 BMP2KLQ5H9B9 411 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 TPTE2Q6XPS3 522 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 C3orf67Q6ZVT6 689 aa16.55■□□□□ 0.24
COPS7B-221ENST00000488111 LRRC24Q50LG9 513 aa16.54■□□□□ 0.24
COPS7B-221ENST00000488111 PUS3Q9BZE2 481 aaKnown RBP16.54■□□□□ 0.24
COPS7B-221ENST00000488111 STK32BQ9NY57 414 aa16.54■□□□□ 0.24
COPS7B-221ENST00000488111 UQCRHLA0A096LP55 91 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 UQCRHP07919 91 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 TAF7LQ5H9L4 462 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 PLEKHM2Q8IWE5 1019 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 NYXQ9GZU5 481 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 ABCC12Q96J65 1359 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 DYNC1I1O14576 645 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 TSHZ3Q63HK5 1081 aa16.53■□□□□ 0.24
COPS7B-221ENST00000488111 TM4SF1P30408 202 aa16.52■□□□□ 0.24
COPS7B-221ENST00000488111 MSL1Q68DK7 614 aa16.52■□□□□ 0.24
COPS7B-221ENST00000488111 SEC31BQ9NQW1 1179 aa16.52■□□□□ 0.24
COPS7B-221ENST00000488111 FOXD4L1Q9NU39 408 aa16.52■□□□□ 0.24
COPS7B-221ENST00000488111 ANKRD18BA2A2Z9 1011 aa16.52■□□□□ 0.23
COPS7B-221ENST00000488111 FLAD1Q8NFF5 587 aa16.52■□□□□ 0.23
COPS7B-221ENST00000488111 CARMIL3Q8ND23 1372 aa16.52■□□□□ 0.23
COPS7B-221ENST00000488111 RGPD3A6NKT7 1758 aaPredicted RBP16.52■□□□□ 0.23
COPS7B-221ENST00000488111 RGPD4Q7Z3J3 1758 aa16.52■□□□□ 0.23
COPS7B-221ENST00000488111 DDR1Q08345 913 aa16.51■□□□□ 0.23
COPS7B-221ENST00000488111 TFCP2Q12800 502 aa16.51■□□□□ 0.23
COPS7B-221ENST00000488111 ERC1Q8IUD2 1116 aa16.51■□□□□ 0.23
COPS7B-221ENST00000488111 SERPINB2P05120 415 aa16.51■□□□□ 0.23
COPS7B-221ENST00000488111 MCM5P33992 734 aa16.51■□□□□ 0.23
COPS7B-221ENST00000488111 CSPP1Q1MSJ5 1256 aa16.51■□□□□ 0.23
COPS7B-221ENST00000488111 ATG9AQ7Z3C6 839 aa16.51■□□□□ 0.23
COPS7B-221ENST00000488111 PDGFDQ9GZP0 370 aaPredicted RBP16.51■□□□□ 0.23
COPS7B-221ENST00000488111 EYA2O00167 538 aa16.5■□□□□ 0.23
COPS7B-221ENST00000488111 ZSCAN23Q3MJ62 389 aa16.5■□□□□ 0.23
COPS7B-221ENST00000488111 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
COPS7B-221ENST00000488111 SLC10A5Q5PT55 438 aa16.5■□□□□ 0.23
COPS7B-221ENST00000488111 CCDC125Q86Z20 511 aa16.5■□□□□ 0.23
COPS7B-221ENST00000488111 CLASRPQ8N2M8 674 aaKnown RBP16.5■□□□□ 0.23
COPS7B-221ENST00000488111 CNBD1Q8NA66 436 aa16.5■□□□□ 0.23
COPS7B-221ENST00000488111 ZKSCAN5Q9Y2L8 839 aa16.5■□□□□ 0.23
COPS7B-221ENST00000488111 HSP90B1P14625 803 aaKnown RBP16.5■□□□□ 0.23
COPS7B-221ENST00000488111 PRR5LQ6MZQ0 368 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 LDHAL6AQ6ZMR3 332 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 AACSQ86V21 672 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 NLGN1Q8N2Q7 840 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 EAF2Q96CJ1 260 aaPredicted RBP16.49■□□□□ 0.23
COPS7B-221ENST00000488111 NLRP3Q96P20 1036 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 CCDC8Q9H0W5 538 aaPredicted RBP16.49■□□□□ 0.23
COPS7B-221ENST00000488111 RBSNQ9H1K0 784 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 TUBGCP6Q96RT7 1819 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 POLRMTO00411 1230 aaKnown RBP16.49■□□□□ 0.23
COPS7B-221ENST00000488111 PDE1AP54750 535 aa16.49■□□□□ 0.23
COPS7B-221ENST00000488111 MX1P20591 662 aa16.48■□□□□ 0.23
COPS7B-221ENST00000488111 LMBRD1Q9NUN5 540 aa16.48■□□□□ 0.23
COPS7B-221ENST00000488111 SALL3Q9BXA9 1300 aa16.48■□□□□ 0.23
COPS7B-221ENST00000488111 CYP2E1P05181 493 aaPredicted RBP16.48■□□□□ 0.23
COPS7B-221ENST00000488111 IL15P40933 162 aaPredicted RBP16.48■□□□□ 0.23
COPS7B-221ENST00000488111 CNNM1Q9NRU3 951 aa16.48■□□□□ 0.23
COPS7B-221ENST00000488111 DDX60Q8IY21 1712 aaKnown RBP16.48■□□□□ 0.23
COPS7B-221ENST00000488111 IFIT2P09913 472 aaKnown RBP16.47■□□□□ 0.23
COPS7B-221ENST00000488111 SF3B3Q15393 1217 aaKnown RBP16.47■□□□□ 0.23
COPS7B-221ENST00000488111 TLR7Q9NYK1 1049 aaKnown RBP16.47■□□□□ 0.23
COPS7B-221ENST00000488111 COL24A1Q17RW2 1714 aa16.47■□□□□ 0.23
COPS7B-221ENST00000488111 MMP10P09238 476 aa16.46■□□□□ 0.23
COPS7B-221ENST00000488111 GSPT1P15170 499 aaKnown RBP16.46■□□□□ 0.23
COPS7B-221ENST00000488111 CAVIN1Q6NZI2 390 aaKnown RBP16.46■□□□□ 0.23
COPS7B-221ENST00000488111 SASS6Q6UVJ0 657 aa16.46■□□□□ 0.23
COPS7B-221ENST00000488111 UPF1Q92900 1129 aaKnown RBP eCLIP16.46■□□□□ 0.231e-6■■□□□ 13.9
COPS7B-221ENST00000488111 CIAO1O76071 339 aa16.46■□□□□ 0.23
COPS7B-221ENST00000488111 NUCB2P80303 420 aa16.46■□□□□ 0.23
COPS7B-221ENST00000488111 TBC1D9Q6ZT07 1266 aa16.46■□□□□ 0.23
COPS7B-221ENST00000488111 TNNI3KQ59H18 835 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 MCTP1Q6DN14 999 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 RIPOR2Q9Y4F9 1068 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 FPGT-TNNI3KV9GXZ4 949 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 TIMM10P62072 90 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 ST5P78524 1137 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 TTC22Q5TAA0 569 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 MPHOSPH8Q99549 860 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 CEP126Q9P2H0 1117 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 MYH3P11055 1940 aa16.45■□□□□ 0.22
COPS7B-221ENST00000488111 METTL24Q5JXM2 366 aa16.44■□□□□ 0.22
COPS7B-221ENST00000488111 HELBQ8NG08 1087 aaPredicted RBP16.44■□□□□ 0.22
COPS7B-221ENST00000488111 CELF1Q92879 486 aaKnown RBP16.44■□□□□ 0.22
COPS7B-221ENST00000488111 NEUROD6Q96NK8 337 aa16.44■□□□□ 0.22
COPS7B-221ENST00000488111 IGHMBP2P38935 993 aaKnown RBP16.44■□□□□ 0.22
COPS7B-221ENST00000488111 UTP14CQ5TAP6 766 aaKnown RBP16.44■□□□□ 0.22
COPS7B-221ENST00000488111 OSBPL3Q9H4L5 887 aa16.44■□□□□ 0.22
COPS7B-221ENST00000488111 PARP3Q9Y6F1 533 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms