RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 FKBP1BP68106 108 aa20.36■□□□□ 0.85
U2AF1-211ENST00000486519 CNGB1Q14028 1251 aaPredicted RBP20.36■□□□□ 0.85
U2AF1-211ENST00000486519 CFHR5Q9BXR6 569 aa20.36■□□□□ 0.85
U2AF1-211ENST00000486519 GPSM2P81274 684 aa20.35■□□□□ 0.85
U2AF1-211ENST00000486519 PARP10Q53GL7 1025 aa20.35■□□□□ 0.85
U2AF1-211ENST00000486519 LRP10Q7Z4F1 713 aa20.35■□□□□ 0.85
U2AF1-211ENST00000486519 VIL1P09327 827 aaKnown RBP20.34■□□□□ 0.85
U2AF1-211ENST00000486519 DDX46Q7L014 1031 aaKnown RBP20.34■□□□□ 0.85
U2AF1-211ENST00000486519 NSFL1CQ9UNZ2 370 aaKnown RBP20.34■□□□□ 0.85
U2AF1-211ENST00000486519 ZNF280AP59817 542 aaPredicted RBP20.33■□□□□ 0.85
U2AF1-211ENST00000486519 INTS3Q68E01 1043 aaKnown RBP20.33■□□□□ 0.85
U2AF1-211ENST00000486519 RTF1Q92541 710 aaKnown RBP20.33■□□□□ 0.85
U2AF1-211ENST00000486519 CELF1Q92879 486 aaKnown RBP20.33■□□□□ 0.85
U2AF1-211ENST00000486519 RANBP2P49792 3224 aaKnown RBP20.33■□□□□ 0.84
U2AF1-211ENST00000486519 ZNF646O15015 1829 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-211ENST00000486519 A0A0C4DFX4 3053 aa20.32■□□□□ 0.84
U2AF1-211ENST00000486519 C6orf229H3BNL8 230 aa20.32■□□□□ 0.84
U2AF1-211ENST00000486519 PER1O15534 1290 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-211ENST00000486519 ANXA1P04083 346 aa20.32■□□□□ 0.84
U2AF1-211ENST00000486519 TAF7Q15545 349 aaPredicted RBP20.32■□□□□ 0.84
U2AF1-211ENST00000486519 LAMB1P07942 1786 aa20.31■□□□□ 0.84
U2AF1-211ENST00000486519 ZNF609O15014 1411 aa20.31■□□□□ 0.84
U2AF1-211ENST00000486519 EIF4A1P60842 406 aaKnown RBP20.31■□□□□ 0.84
U2AF1-211ENST00000486519 EIF4G2P78344 907 aaKnown RBP eCLIP20.31■□□□□ 0.84
U2AF1-211ENST00000486519 PTPN12Q05209 780 aaKnown RBP20.31■□□□□ 0.84
U2AF1-211ENST00000486519 PROSER3Q2NL68 480 aa20.31■□□□□ 0.84
U2AF1-211ENST00000486519 CHRDL2Q6WN34 429 aa20.31■□□□□ 0.84
U2AF1-211ENST00000486519 ARMC5Q96C12 935 aa20.31■□□□□ 0.84
U2AF1-211ENST00000486519 PTPN22Q9Y2R2 807 aa20.31■□□□□ 0.84
U2AF1-211ENST00000486519 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
U2AF1-211ENST00000486519 CD99L2Q8TCZ2 262 aa20.3■□□□□ 0.84
U2AF1-211ENST00000486519 RBM27Q9P2N5 1060 aaKnown RBP20.3■□□□□ 0.84
U2AF1-211ENST00000486519 FZD1Q9UP38 647 aa20.3■□□□□ 0.84
U2AF1-211ENST00000486519 PRKG1Q13976 671 aa20.29■□□□□ 0.84
U2AF1-211ENST00000486519 TTLL12Q14166 644 aaPredicted RBP20.29■□□□□ 0.84
U2AF1-211ENST00000486519 PDIA6Q15084 440 aa20.29■□□□□ 0.84
U2AF1-211ENST00000486519 SREBF2Q12772 1141 aa20.28■□□□□ 0.84
U2AF1-211ENST00000486519 TBC1D16Q8TBP0 767 aa20.28■□□□□ 0.84
U2AF1-211ENST00000486519 ZSWIM8A7E2V4 1837 aa20.27■□□□□ 0.84
U2AF1-211ENST00000486519 IGF2BP3O00425 579 aaKnown RBP eCLIP20.27■□□□□ 0.84
U2AF1-211ENST00000486519 NBPF9Q3BBW0 867 aa20.27■□□□□ 0.84
U2AF1-211ENST00000486519 GMLQ99445 158 aa20.27■□□□□ 0.84
U2AF1-211ENST00000486519 MYOZ2Q9NPC6 264 aa20.27■□□□□ 0.84
U2AF1-211ENST00000486519 PITPNM2Q9BZ72 1349 aa20.27■□□□□ 0.83
U2AF1-211ENST00000486519 SPRYD7Q5W111 196 aa20.26■□□□□ 0.83
U2AF1-211ENST00000486519 RSBN1LQ6PCB5 846 aaPredicted RBP20.26■□□□□ 0.83
U2AF1-211ENST00000486519 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.25■□□□□ 0.83
U2AF1-211ENST00000486519 CUL9Q8IWT3 2517 aa20.24■□□□□ 0.83
U2AF1-211ENST00000486519 TMC4Q7Z404 712 aa20.24■□□□□ 0.83
U2AF1-211ENST00000486519 IFNL1Q8IU54 200 aa20.24■□□□□ 0.83
U2AF1-211ENST00000486519 ZNF333Q96JL9 665 aa20.24■□□□□ 0.83
U2AF1-211ENST00000486519 TRMT112Q9UI30 125 aaKnown RBP20.24■□□□□ 0.83
U2AF1-211ENST00000486519 SH3TC1Q8TE82 1336 aa20.24■□□□□ 0.83
U2AF1-211ENST00000486519 MYCP01106 439 aaPredicted RBP20.23■□□□□ 0.83
U2AF1-211ENST00000486519 MXD3Q9BW11 206 aa20.23■□□□□ 0.83
U2AF1-211ENST00000486519 AGBL3Q8NEM8 1001 aa20.22■□□□□ 0.83
U2AF1-211ENST00000486519 EYA3Q99504 573 aa20.22■□□□□ 0.83
U2AF1-211ENST00000486519 HTATSF1O43719 755 aaKnown RBP20.21■□□□□ 0.83
U2AF1-211ENST00000486519 USP17L8P0C7I0 530 aa20.21■□□□□ 0.83
U2AF1-211ENST00000486519 LDLRAD1Q5T700 205 aa20.21■□□□□ 0.83
U2AF1-211ENST00000486519 U2AF1L5P0DN76 240 aaPredicted RBP20.2■□□□□ 0.82
U2AF1-211ENST00000486519 U2AF1Q01081 240 aaKnown RBP eCLIP20.2■□□□□ 0.82
U2AF1-211ENST00000486519 CRHR2Q13324 411 aa20.2■□□□□ 0.82
U2AF1-211ENST00000486519 EFCC1Q9HA90 598 aa20.2■□□□□ 0.82
U2AF1-211ENST00000486519 SOX1O00570 391 aaPredicted RBP20.19■□□□□ 0.82
U2AF1-211ENST00000486519 UFL1O94874 794 aa20.19■□□□□ 0.82
U2AF1-211ENST00000486519 EIF2S2P20042 333 aaKnown RBP20.19■□□□□ 0.82
U2AF1-211ENST00000486519 AIMP1Q12904 312 aaKnown RBP20.19■□□□□ 0.82
U2AF1-211ENST00000486519 ERO1AQ96HE7 468 aa20.19■□□□□ 0.82
U2AF1-211ENST00000486519 CLMNQ96JQ2 1002 aa20.19■□□□□ 0.82
U2AF1-211ENST00000486519 TMEM106CQ9BVX2 250 aa20.19■□□□□ 0.82
U2AF1-211ENST00000486519 ZC3H12CQ9C0D7 883 aaKnown RBP20.19■□□□□ 0.82
U2AF1-211ENST00000486519 PRO3102Q9H379 93 aa20.19■□□□□ 0.82
U2AF1-211ENST00000486519 PTCH2Q9Y6C5 1203 aa20.19■□□□□ 0.82
U2AF1-211ENST00000486519 ERBB4Q15303 1308 aa20.19■□□□□ 0.82
U2AF1-211ENST00000486519 SSC5DA1L4H1 1573 aa20.18■□□□□ 0.82
U2AF1-211ENST00000486519 WTIPA6NIX2 430 aaPredicted RBP20.18■□□□□ 0.82
U2AF1-211ENST00000486519 ALDH1A1P00352 501 aa20.18■□□□□ 0.82
U2AF1-211ENST00000486519 TCIRG1Q13488 830 aa20.18■□□□□ 0.82
U2AF1-211ENST00000486519 COPS6Q7L5N1 327 aa20.18■□□□□ 0.82
U2AF1-211ENST00000486519 ANGEL1Q9UNK9 670 aaKnown RBP20.18■□□□□ 0.82
U2AF1-211ENST00000486519 LAMA3Q16787 3333 aa20.17■□□□□ 0.82
U2AF1-211ENST00000486519 WNT10BO00744 389 aa20.17■□□□□ 0.82
U2AF1-211ENST00000486519 SASH1O94885 1247 aa20.17■□□□□ 0.82
U2AF1-211ENST00000486519 GJA5P36382 358 aa20.17■□□□□ 0.82
U2AF1-211ENST00000486519 SF3B3Q15393 1217 aaKnown RBP20.17■□□□□ 0.82
U2AF1-211ENST00000486519 XAGE3Q8WTP9 111 aa20.17■□□□□ 0.82
U2AF1-211ENST00000486519 FAM89AQ96GI7 184 aa20.17■□□□□ 0.82
U2AF1-211ENST00000486519 MANSC4A6NHS7 340 aaPredicted RBP20.16■□□□□ 0.82
U2AF1-211ENST00000486519 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
U2AF1-211ENST00000486519 NECTIN2Q92692 538 aa20.16■□□□□ 0.82
U2AF1-211ENST00000486519 WNK4Q96J92 1243 aa20.16■□□□□ 0.82
U2AF1-211ENST00000486519 SEC31BQ9NQW1 1179 aa20.16■□□□□ 0.82
U2AF1-211ENST00000486519 G3V3G9 751 aa20.15■□□□□ 0.82
U2AF1-211ENST00000486519 SLC4A8Q2Y0W8 1093 aa20.15■□□□□ 0.82
U2AF1-211ENST00000486519 DCAF8Q5TAQ9 597 aa20.15■□□□□ 0.82
U2AF1-211ENST00000486519 ARMC9Q7Z3E5 817 aa20.15■□□□□ 0.82
U2AF1-211ENST00000486519 PNISRQ8TF01 805 aaKnown RBP20.15■□□□□ 0.82
U2AF1-211ENST00000486519 LRCH3Q96II8 777 aa20.15■□□□□ 0.82
U2AF1-211ENST00000486519 PTPN18Q99952 460 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms