RNA–Protein interactions for RNA: ENST00000482042.1

CTNNB1-213, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 1,366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-213ENST00000482042 GAS2L1Q99501 681 aaPredicted RBP9.3□□□□□ -0.92
CTNNB1-213ENST00000482042 CDK19Q9BWU1 502 aa9.3□□□□□ -0.92
CTNNB1-213ENST00000482042 TRPM3Q9HCF6 1732 aaPredicted RBP9.3□□□□□ -0.92
CTNNB1-213ENST00000482042 A0A1B0GTH6 734 aa9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 C4orf17Q53FE4 359 aa9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 RHBDD1Q8TEB9 315 aa9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 HIRIP3Q9BW71 556 aaPredicted RBP9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 PCDHGA11Q9Y5H2 935 aa9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 COL16A1Q07092 1604 aaPredicted RBP9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 ALS2Q96Q42 1657 aa9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 ANKRD26Q9UPS8 1709 aa9.29□□□□□ -0.92
CTNNB1-213ENST00000482042 FNBP4Q8N3X1 1017 aaPredicted RBP9.28□□□□□ -0.92
CTNNB1-213ENST00000482042 NRKQ7Z2Y5 1582 aa9.28□□□□□ -0.92
CTNNB1-213ENST00000482042 BRD4O60885 1362 aaPredicted RBP9.28□□□□□ -0.92
CTNNB1-213ENST00000482042 COL22A1Q8NFW1 1626 aaPredicted RBP9.28□□□□□ -0.92
CTNNB1-213ENST00000482042 PPIP5K1Q6PFW1 1433 aa9.28□□□□□ -0.92
CTNNB1-213ENST00000482042 USP54Q70EL1 1684 aa9.27□□□□□ -0.92
CTNNB1-213ENST00000482042 USP17L5A8MUK1 530 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 TMEM229AB2RXF0 380 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 HSPA5P11021 654 aaKnown RBP9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 PHKA2P46019 1235 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 NCOA4Q13772 614 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 NUDT16Q96DE0 195 aaKnown RBP9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 TESK2Q96S53 571 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 NOD1Q9Y239 953 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 NPHP3Q7Z494 1330 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 ABCA3Q99758 1704 aa9.27□□□□□ -0.93
CTNNB1-213ENST00000482042 PIP4K2BP78356 416 aa9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 SRSF11Q05519 484 aaKnown RBP9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 PSME1Q06323 249 aa9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 FOXR1Q6PIV2 292 aa9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 CLUAP1Q96AJ1 413 aa9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 SLC4A9Q96Q91 983 aa9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 UCN2Q96RP3 112 aa9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 NUCKS1Q9H1E3 243 aaKnown RBP9.26□□□□□ -0.93
CTNNB1-213ENST00000482042 THBS1P07996 1170 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 SMTNP53814 917 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 MTFR1Q15390 333 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 HDGFL1Q5TGJ6 251 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 ZNF385CQ66K41 422 aaPredicted RBP9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 BRINP3Q76B58 766 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 PLEKHM2Q8IWE5 1019 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 GTPBP3Q969Y2 492 aaKnown RBP9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 MBIPQ9NS73 344 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 CRYBG1Q9Y4K1 1723 aa9.25□□□□□ -0.93
CTNNB1-213ENST00000482042 GPR25O00155 361 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 ADAMTS2O95450 1211 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 GTF2IP78347 998 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 LBRQ14739 615 aaKnown RBP9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 NGDNQ8NEJ9 315 aaKnown RBP9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 GPAMQ9HCL2 828 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 POLR3AO14802 1390 aaPredicted RBP9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 PHRF1Q9P1Y6 1649 aaKnown RBP9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 HDGFL2Q7Z4V5 671 aaPredicted RBP9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 ZNF295-AS1Q8N0V1 137 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 TRERF1Q96PN7 1200 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 ORAI2Q96SN7 254 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 TERF2IPQ9NYB0 399 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 PRR36Q9H6K5 1346 aa9.24□□□□□ -0.93
CTNNB1-213ENST00000482042 DISP3Q9P2K9 1392 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 PXDNQ92626 1479 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 A6NJR5 290 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 MSX1P28360 303 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 TBC1D9Q6ZT07 1266 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 DEPDC4Q8N2C3 294 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 WHAMMQ8TF30 809 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 LRRC59Q96AG4 307 aaKnown RBP9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 IQSEC3Q9UPP2 1182 aaPredicted RBP9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 SBNO1A3KN83 1393 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 PIK3C2AO00443 1686 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 LTN1O94822 1766 aa9.23□□□□□ -0.93
CTNNB1-213ENST00000482042 MAP2P11137 1827 aaKnown RBP9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 ACEP12821 1306 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 USP17L3A6NCW0 530 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 USP17L4A6NCW7 530 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 A6NJY4 79 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 ATP9BO43861 1147 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 PLA2G4AP47712 749 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 UBAP2LQ14157 1087 aaKnown RBP9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 USP17L2Q6R6M4 530 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 USP17L1Q7RTZ2 530 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 SVOPQ8N4V2 548 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 PMFBP1Q8TBY8 1022 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 NIFKQ9BYG3 293 aaKnown RBP9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 CRISPLD1Q9H336 500 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 SERTAD1Q9UHV2 236 aa9.22□□□□□ -0.93
CTNNB1-213ENST00000482042 MED1Q15648 1581 aaPredicted RBP9.21□□□□□ -0.93
CTNNB1-213ENST00000482042 USP6P35125 1406 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 CPSF1Q10570 1443 aaKnown RBP9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 TNS3Q68CZ2 1445 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 ARHGEF10O15013 1369 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 KTN1Q86UP2 1357 aaKnown RBP9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 ANKRD36BQ8N2N9 1353 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 CDK2AP1O14519 115 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 ARHGEF15O94989 841 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 KRT28Q7Z3Y7 464 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 TRIM50Q86XT4 487 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 C1orf216Q8TAB5 229 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 TMC1Q8TDI8 760 aa9.21□□□□□ -0.94
CTNNB1-213ENST00000482042 GLMNQ92990 594 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms