RNA–Protein interactions for RNA: ENST00000480055.5

SMURF1-204, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

TSL 3

Gene SMURF1, Length 1,012 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-204ENST00000480055 RTFDC1Q9BY42 306 aaPredicted RBP13.6□□□□□ -0.23
SMURF1-204ENST00000480055 GLIS2Q9BZE0 524 aaPredicted RBP13.6□□□□□ -0.23
SMURF1-204ENST00000480055 PNNQ9H307 717 aaKnown RBP13.6□□□□□ -0.23
SMURF1-204ENST00000480055 PCDH10Q9P2E7 1040 aa13.6□□□□□ -0.23
SMURF1-204ENST00000480055 ZNRF3Q9ULT6 936 aa13.6□□□□□ -0.23
SMURF1-204ENST00000480055 ATP6V0A2Q9Y487 856 aa13.6□□□□□ -0.23
SMURF1-204ENST00000480055 PLCG2P16885 1265 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 GMPSP49915 693 aaPredicted RBP13.59□□□□□ -0.23
SMURF1-204ENST00000480055 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 GIGYF2Q6Y7W6 1299 aaKnown RBP13.59□□□□□ -0.23
SMURF1-204ENST00000480055 SUPT20HQ8NEM7 779 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 NLRP3Q96P20 1036 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 METRNQ9UJH8 293 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 SCN9AQ15858 1988 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 ABCC4O15439 1325 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 ERBB4Q15303 1308 aa13.59□□□□□ -0.23
SMURF1-204ENST00000480055 EIF2S2P20042 333 aaKnown RBP13.58□□□□□ -0.24
SMURF1-204ENST00000480055 PARP10Q53GL7 1025 aa13.58□□□□□ -0.24
SMURF1-204ENST00000480055 SPRYD3Q8NCJ5 442 aa13.58□□□□□ -0.24
SMURF1-204ENST00000480055 ZC3H15Q8WU90 426 aaKnown RBP13.58□□□□□ -0.24
SMURF1-204ENST00000480055 CFAP44Q96MT7 982 aa13.58□□□□□ -0.24
SMURF1-204ENST00000480055 TSPYL4Q9UJ04 414 aa13.58□□□□□ -0.24
SMURF1-204ENST00000480055 CIAPIN1Q6FI81 312 aa13.57□□□□□ -0.24
SMURF1-204ENST00000480055 PLEKHF1Q96S99 279 aa13.57□□□□□ -0.24
SMURF1-204ENST00000480055 UTP14AQ9BVJ6 771 aaKnown RBP13.57□□□□□ -0.24
SMURF1-204ENST00000480055 MFRPQ9BY79 579 aa13.57□□□□□ -0.24
SMURF1-204ENST00000480055 OCEL1Q9H607 264 aa13.57□□□□□ -0.24
SMURF1-204ENST00000480055 HIRAP54198 1017 aaPredicted RBP13.56□□□□□ -0.24
SMURF1-204ENST00000480055 KIAA2012Q0VF49 1180 aa13.56□□□□□ -0.24
SMURF1-204ENST00000480055 NOGQ13253 232 aa13.56□□□□□ -0.24
SMURF1-204ENST00000480055 DGKZQ13574 1117 aa13.56□□□□□ -0.24
SMURF1-204ENST00000480055 SLC10A5Q5PT55 438 aa13.56□□□□□ -0.24
SMURF1-204ENST00000480055 TRPM4Q8TD43 1214 aa13.56□□□□□ -0.24
SMURF1-204ENST00000480055 DPP8Q6V1X1 898 aaPredicted RBP13.55□□□□□ -0.24
SMURF1-204ENST00000480055 CDC37L1Q7L3B6 337 aa13.55□□□□□ -0.24
SMURF1-204ENST00000480055 LRP10Q7Z4F1 713 aa13.55□□□□□ -0.24
SMURF1-204ENST00000480055 ZNF408Q9H9D4 720 aa13.55□□□□□ -0.24
SMURF1-204ENST00000480055 COL4A1P02462 1669 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 RIPK4P57078 832 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 IRX5P78411 483 aaPredicted RBP13.54□□□□□ -0.24
SMURF1-204ENST00000480055 AIMP1Q12904 312 aaKnown RBP13.54□□□□□ -0.24
SMURF1-204ENST00000480055 TNIP1Q15025 636 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 SP8Q8IXZ3 490 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 MPNDQ8N594 471 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 NECTIN2Q92692 538 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 ZIC5Q96T25 663 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 BCL2L13Q9BXK5 485 aa13.54□□□□□ -0.24
SMURF1-204ENST00000480055 SHTN1A0MZ66 631 aa13.53□□□□□ -0.24
SMURF1-204ENST00000480055 YDJCA8MPS7 323 aa13.53□□□□□ -0.24
SMURF1-204ENST00000480055 BBOX1O75936 387 aa13.53□□□□□ -0.24
SMURF1-204ENST00000480055 RAD17O75943 681 aa13.53□□□□□ -0.24
SMURF1-204ENST00000480055 ANXA1P04083 346 aa13.53□□□□□ -0.24
SMURF1-204ENST00000480055 ZEB1P37275 1124 aaPredicted RBP13.53□□□□□ -0.24
SMURF1-204ENST00000480055 HUNKP57058 714 aa13.53□□□□□ -0.24
SMURF1-204ENST00000480055 CNOT7Q9UIV1 285 aaKnown RBP13.53□□□□□ -0.24
SMURF1-204ENST00000480055 FAM155AB1AL88 458 aaPredicted RBP13.52□□□□□ -0.25
SMURF1-204ENST00000480055 HCLS1P14317 486 aaPredicted RBP13.52□□□□□ -0.25
SMURF1-204ENST00000480055 PDIA6Q15084 440 aa13.52□□□□□ -0.25
SMURF1-204ENST00000480055 HSP90AB3PQ58FF7 597 aa13.52□□□□□ -0.25
SMURF1-204ENST00000480055 DDX46Q7L014 1031 aaKnown RBP13.52□□□□□ -0.25
SMURF1-204ENST00000480055 MICALL2Q8IY33 904 aa13.52□□□□□ -0.25
SMURF1-204ENST00000480055 SAGE1Q9NXZ1 904 aa13.52□□□□□ -0.25
SMURF1-204ENST00000480055 TRMT112Q9UI30 125 aaKnown RBP13.52□□□□□ -0.25
SMURF1-204ENST00000480055 ZNF646O15015 1829 aaPredicted RBP13.52□□□□□ -0.25
SMURF1-204ENST00000480055 PAPPA2Q9BXP8 1791 aa13.51□□□□□ -0.25
SMURF1-204ENST00000480055 H7C1D1 291 aa13.51□□□□□ -0.25
SMURF1-204ENST00000480055 GRAPQ13588 217 aa13.51□□□□□ -0.25
SMURF1-204ENST00000480055 PROSER3Q2NL68 480 aa13.51□□□□□ -0.25
SMURF1-204ENST00000480055 COPS6Q7L5N1 327 aa13.51□□□□□ -0.25
SMURF1-204ENST00000480055 GRAPLQ8TC17 118 aaPredicted RBP13.51□□□□□ -0.25
SMURF1-204ENST00000480055 GTPBP6O43824 516 aaPredicted RBP13.5□□□□□ -0.25
SMURF1-204ENST00000480055 LMOD3Q0VAK6 560 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 RGMBQ6NW40 437 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 TMC4Q7Z404 712 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 USP48Q86UV5 1035 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 NLRP10Q86W26 655 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 FBXO22Q8NEZ5 403 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 XAGE3Q8WTP9 111 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 DPF2Q92785 391 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 ZNF428Q96B54 188 aa13.5□□□□□ -0.25
SMURF1-204ENST00000480055 COLQQ9Y215 455 aaPredicted RBP13.5□□□□□ -0.25
SMURF1-204ENST00000480055 LAS1LQ9Y4W2 734 aaKnown RBP13.5□□□□□ -0.25
SMURF1-204ENST00000480055 SPEF2Q9C093 1822 aa13.49□□□□□ -0.25
SMURF1-204ENST00000480055 NEUROD2Q15784 382 aa13.49□□□□□ -0.25
SMURF1-204ENST00000480055 DLK2Q6UY11 383 aa13.49□□□□□ -0.25
SMURF1-204ENST00000480055 GBA2Q9HCG7 927 aaPredicted RBP13.49□□□□□ -0.25
SMURF1-204ENST00000480055 BABAM1Q9NWV8 329 aa13.49□□□□□ -0.25
SMURF1-204ENST00000480055 MYH3P11055 1940 aa13.49□□□□□ -0.25
SMURF1-204ENST00000480055 LAMB1P07942 1786 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 SH3TC1Q8TE82 1336 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 G3V3G9 751 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 PSMD14O00487 310 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 EGFRP00533 1210 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 TCIRG1Q13488 830 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 SAMD7Q7Z3H4 446 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 KRT26Q7Z3Y9 468 aa13.48□□□□□ -0.25
SMURF1-204ENST00000480055 RTL9Q8NET4 1388 aa13.47□□□□□ -0.25
SMURF1-204ENST00000480055 ADM5C9JUS6 153 aa13.47□□□□□ -0.25
SMURF1-204ENST00000480055 RPS12P25398 132 aaKnown RBP13.47□□□□□ -0.25
SMURF1-204ENST00000480055 SOX10P56693 466 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms