RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 TBC1D8BQ0IIM8 1120 aa8.69□□□□□ -1.02
SSR3-206ENST00000476217 ECM1Q16610 540 aa8.69□□□□□ -1.02
SSR3-206ENST00000476217 ALYREFQ86V81 257 aaKnown RBP8.69□□□□□ -1.02
SSR3-206ENST00000476217 GNB5O14775 395 aa8.68□□□□□ -1.02
SSR3-206ENST00000476217 FAM35AQ86V20 835 aa8.68□□□□□ -1.02
SSR3-206ENST00000476217 TTC9Q92623 222 aa8.68□□□□□ -1.02
SSR3-206ENST00000476217 SPACA7Q96KW9 195 aa8.68□□□□□ -1.02
SSR3-206ENST00000476217 NOP53Q9NZM5 478 aaKnown RBP8.68□□□□□ -1.02
SSR3-206ENST00000476217 BIN2Q9UBW5 565 aaPredicted RBP8.68□□□□□ -1.02
SSR3-206ENST00000476217 SPDYE3A6NKU9 549 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 GHRHP01286 108 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 HYAL2Q12891 473 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 AEBP1Q8IUX7 1158 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 CACTIN-AS1Q8N1I8 211 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 DMRTB1Q96MA1 342 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 GGNBP2Q9H3C7 697 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 DCTN4Q9UJW0 460 aa8.67□□□□□ -1.02
SSR3-206ENST00000476217 LOC102724428A0A0B4J2F2 783 aa8.66□□□□□ -1.02
SSR3-206ENST00000476217 LILRB5O75023 590 aa8.66□□□□□ -1.02
SSR3-206ENST00000476217 SIK1P57059 783 aa8.66□□□□□ -1.02
SSR3-206ENST00000476217 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
SSR3-206ENST00000476217 RBCK1Q9BYM8 510 aa8.66□□□□□ -1.02
SSR3-206ENST00000476217 CCDC87Q9NVE4 849 aa8.66□□□□□ -1.02
SSR3-206ENST00000476217 CCDC88BA6NC98 1476 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 M0R082 166 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 RGS9O75916 674 aaPredicted RBP8.65□□□□□ -1.02
SSR3-206ENST00000476217 KIF4AO95239 1232 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 PSAPL1Q6NUJ1 521 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 ELMSAN1Q6PJG2 1045 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 C20orf204Q6ZNR8 217 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 ZNF417Q8TAU3 575 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 ZNF587Q96SQ5 575 aaPredicted RBP8.65□□□□□ -1.02
SSR3-206ENST00000476217 FAM129BQ96TA1 746 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 TMEM63CQ9P1W3 806 aa8.65□□□□□ -1.02
SSR3-206ENST00000476217 ZBTB42B2RXF5 422 aa8.64□□□□□ -1.03
SSR3-206ENST00000476217 CES1P23141 567 aa8.64□□□□□ -1.03
SSR3-206ENST00000476217 STARD13Q9Y3M8 1113 aa8.64□□□□□ -1.03
SSR3-206ENST00000476217 PHACTR2O75167 634 aa8.63□□□□□ -1.03
SSR3-206ENST00000476217 TNFRSF21O75509 655 aa8.63□□□□□ -1.03
SSR3-206ENST00000476217 ALBP02768 609 aa8.63□□□□□ -1.03
SSR3-206ENST00000476217 CPB1P15086 417 aa8.63□□□□□ -1.03
SSR3-206ENST00000476217 HOXB4P17483 251 aaPredicted RBP8.63□□□□□ -1.03
SSR3-206ENST00000476217 EIF2AK2P19525 551 aaKnown RBP8.63□□□□□ -1.03
SSR3-206ENST00000476217 KCNMA1Q12791 1236 aa8.63□□□□□ -1.03
SSR3-206ENST00000476217 LINC00114Q6XXX2 140 aa8.63□□□□□ -1.03
SSR3-206ENST00000476217 TMC1Q8TDI8 760 aa8.63□□□□□ -1.03
SSR3-206ENST00000476217 ALKBH8Q96BT7 664 aaKnown RBP8.63□□□□□ -1.03
SSR3-206ENST00000476217 JPH1Q9HDC5 661 aaPredicted RBP8.63□□□□□ -1.03
SSR3-206ENST00000476217 SNRPNP63162 240 aaKnown RBP8.62□□□□□ -1.03
SSR3-206ENST00000476217 NCAPG2Q86XI2 1143 aa8.62□□□□□ -1.03
SSR3-206ENST00000476217 ZSCAN29Q8IWY8 852 aaPredicted RBP8.62□□□□□ -1.03
SSR3-206ENST00000476217 NSUN5Q96P11 429 aaKnown RBP8.62□□□□□ -1.03
SSR3-206ENST00000476217 LPIN3Q9BQK8 851 aa8.62□□□□□ -1.03
SSR3-206ENST00000476217 NAGPAQ9UK23 515 aa8.62□□□□□ -1.03
SSR3-206ENST00000476217 CNTNAP5Q8WYK1 1306 aa8.61□□□□□ -1.03
SSR3-206ENST00000476217 SMNDC1O75940 238 aaKnown RBP eCLIP8.61□□□□□ -1.03
SSR3-206ENST00000476217 EDN3P14138 238 aa8.61□□□□□ -1.03
SSR3-206ENST00000476217 MAPK1P28482 360 aa8.61□□□□□ -1.03
SSR3-206ENST00000476217 PERM1Q5SV97 790 aa8.61□□□□□ -1.03
SSR3-206ENST00000476217 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.033e-9■■■■■ 29
SSR3-206ENST00000476217 DNAJC25Q9H1X3 360 aa8.61□□□□□ -1.03
SSR3-206ENST00000476217 AMOTL2Q9Y2J4 779 aa8.61□□□□□ -1.03
SSR3-206ENST00000476217 MLLT1Q03111 559 aaPredicted RBP8.6□□□□□ -1.03
SSR3-206ENST00000476217 C1orf127Q8N9H9 656 aa8.6□□□□□ -1.03
SSR3-206ENST00000476217 DCAF11Q8TEB1 546 aa8.6□□□□□ -1.03
SSR3-206ENST00000476217 PLD4Q96BZ4 506 aa8.6□□□□□ -1.03
SSR3-206ENST00000476217 SMG9Q9H0W8 520 aaKnown RBP8.6□□□□□ -1.03
SSR3-206ENST00000476217 SALL4Q9UJQ4 1053 aa8.6□□□□□ -1.03
SSR3-206ENST00000476217 A6NHS1 94 aa8.59□□□□□ -1.03
SSR3-206ENST00000476217 HFE2Q6ZVN8 426 aa8.59□□□□□ -1.03
SSR3-206ENST00000476217 NUDT8Q8WV74 236 aa8.59□□□□□ -1.03
SSR3-206ENST00000476217 MUC3BQ9H195 1237 aa8.59□□□□□ -1.03
SSR3-206ENST00000476217 ZFYVE28Q9HCC9 887 aa8.59□□□□□ -1.03
SSR3-206ENST00000476217 CNTN3Q9P232 1028 aa8.59□□□□□ -1.03
SSR3-206ENST00000476217 FAM177BA6PVY3 158 aa8.58□□□□□ -1.04
SSR3-206ENST00000476217 J3QW42 95 aa8.58□□□□□ -1.04
SSR3-206ENST00000476217 CPNE3O75131 537 aaKnown RBP8.58□□□□□ -1.04
SSR3-206ENST00000476217 NID1P14543 1247 aa8.58□□□□□ -1.04
SSR3-206ENST00000476217 AFF1P51825 1210 aaKnown RBP8.58□□□□□ -1.04
SSR3-206ENST00000476217 DTWD1Q8N5C7 304 aa8.58□□□□□ -1.04
SSR3-206ENST00000476217 CEP120Q8N960 986 aa8.58□□□□□ -1.04
SSR3-206ENST00000476217 CHRDQ9H2X0 955 aa8.58□□□□□ -1.04
SSR3-206ENST00000476217 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
SSR3-206ENST00000476217 ZBTB7CA1YPR0 619 aa8.57□□□□□ -1.04
SSR3-206ENST00000476217 PRRT3Q5FWE3 981 aa8.57□□□□□ -1.04
SSR3-206ENST00000476217 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
SSR3-206ENST00000476217 ASB16Q96NS5 453 aa8.57□□□□□ -1.04
SSR3-206ENST00000476217 CYP2E1P05181 493 aaPredicted RBP8.56□□□□□ -1.04
SSR3-206ENST00000476217 SPATA31C1P0DKV0 1188 aa8.56□□□□□ -1.04
SSR3-206ENST00000476217 IRS1P35568 1242 aa8.56□□□□□ -1.04
SSR3-206ENST00000476217 PLVAPQ9BX97 442 aa8.56□□□□□ -1.04
SSR3-206ENST00000476217 PBX4Q9BYU1 374 aa8.56□□□□□ -1.04
SSR3-206ENST00000476217 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
SSR3-206ENST00000476217 FOXD3Q9UJU5 478 aaPredicted RBP8.56□□□□□ -1.04
SSR3-206ENST00000476217 EREGO14944 169 aa8.55□□□□□ -1.04
SSR3-206ENST00000476217 GPR182O15218 404 aa8.55□□□□□ -1.04
SSR3-206ENST00000476217 RAC1P63000 192 aa8.55□□□□□ -1.04
SSR3-206ENST00000476217 TRIM28Q13263 835 aaKnown RBP8.55□□□□□ -1.04
SSR3-206ENST00000476217 COL9A3Q14050 684 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms