RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 REM2Q8IYK8 340 aaPredicted RBP24.84■■□□□ 1.57
NCKIPSD-209ENST00000470006 ZC3H12CQ9C0D7 883 aaKnown RBP24.84■■□□□ 1.57
NCKIPSD-209ENST00000470006 RTL9Q8NET4 1388 aa24.83■■□□□ 1.57
NCKIPSD-209ENST00000470006 RIPK4P57078 832 aa24.83■■□□□ 1.57
NCKIPSD-209ENST00000470006 FAM89AQ96GI7 184 aa24.83■■□□□ 1.57
NCKIPSD-209ENST00000470006 HPS5Q9UPZ3 1129 aa24.83■■□□□ 1.57
NCKIPSD-209ENST00000470006 ASTN2O75129 1339 aaPredicted RBP24.83■■□□□ 1.56
NCKIPSD-209ENST00000470006 RTL5Q5HYW3 569 aaPredicted RBP24.82■■□□□ 1.56
NCKIPSD-209ENST00000470006 ANGEL2Q5VTE6 544 aaKnown RBP24.81■■□□□ 1.56
NCKIPSD-209ENST00000470006 RASAL3Q86YV0 1011 aa24.81■■□□□ 1.56
NCKIPSD-209ENST00000470006 TBC1D16Q8TBP0 767 aa24.81■■□□□ 1.56
NCKIPSD-209ENST00000470006 DDX60Q8IY21 1712 aaKnown RBP24.81■■□□□ 1.56
NCKIPSD-209ENST00000470006 SCARF1Q14162 830 aa24.8■■□□□ 1.56
NCKIPSD-209ENST00000470006 SF3B3Q15393 1217 aaKnown RBP24.8■■□□□ 1.56
NCKIPSD-209ENST00000470006 ATP5J2-PTCD1G3V325 749 aa24.79■■□□□ 1.56
NCKIPSD-209ENST00000470006 VIL1P09327 827 aaKnown RBP24.79■■□□□ 1.56
NCKIPSD-209ENST00000470006 BABAM1Q9NWV8 329 aa24.79■■□□□ 1.56
NCKIPSD-209ENST00000470006 ANKIB1Q9P2G1 1089 aa24.79■■□□□ 1.56
NCKIPSD-209ENST00000470006 RPS8P62241 208 aaKnown RBP24.78■■□□□ 1.56
NCKIPSD-209ENST00000470006 PKN2Q16513 984 aaKnown RBP24.78■■□□□ 1.56
NCKIPSD-209ENST00000470006 TBC1D8O95759 1140 aa24.77■■□□□ 1.56
NCKIPSD-209ENST00000470006 ANKRD13DQ6ZTN6 518 aa24.77■■□□□ 1.56
NCKIPSD-209ENST00000470006 PLBD2Q8NHP8 589 aa24.77■■□□□ 1.56
NCKIPSD-209ENST00000470006 CHPF2Q9P2E5 772 aa24.77■■□□□ 1.56
NCKIPSD-209ENST00000470006 LAS1LQ9Y4W2 734 aaKnown RBP24.77■■□□□ 1.56
NCKIPSD-209ENST00000470006 UFL1O94874 794 aa24.76■■□□□ 1.55
NCKIPSD-209ENST00000470006 LMOD3Q0VAK6 560 aa24.76■■□□□ 1.55
NCKIPSD-209ENST00000470006 TTLL12Q14166 644 aaPredicted RBP24.76■■□□□ 1.55
NCKIPSD-209ENST00000470006 SCN9AQ15858 1988 aa24.76■■□□□ 1.55
NCKIPSD-209ENST00000470006 IRS4O14654 1257 aaPredicted RBP24.75■■□□□ 1.55
NCKIPSD-209ENST00000470006 FKBP1BP68106 108 aa24.75■■□□□ 1.55
NCKIPSD-209ENST00000470006 ZNF296Q8WUU4 475 aaPredicted RBP24.75■■□□□ 1.55
NCKIPSD-209ENST00000470006 KRT24Q2M2I5 525 aa24.74■■□□□ 1.55
NCKIPSD-209ENST00000470006 RSBN1LQ6PCB5 846 aaPredicted RBP24.74■■□□□ 1.55
NCKIPSD-209ENST00000470006 ISCA1Q9BUE6 129 aa24.74■■□□□ 1.55
NCKIPSD-209ENST00000470006 GGA1Q9UJY5 639 aa24.74■■□□□ 1.55
NCKIPSD-209ENST00000470006 UBE2Q2LH0YL09 131 aa24.73■■□□□ 1.55
NCKIPSD-209ENST00000470006 HDGFL1Q5TGJ6 251 aa24.73■■□□□ 1.55
NCKIPSD-209ENST00000470006 MOB2Q70IA6 237 aa24.73■■□□□ 1.55
NCKIPSD-209ENST00000470006 AGBL3Q8NEM8 1001 aa24.73■■□□□ 1.55
NCKIPSD-209ENST00000470006 SCAF8Q9UPN6 1271 aaKnown RBP24.73■■□□□ 1.55
NCKIPSD-209ENST00000470006 ZNF280AP59817 542 aaPredicted RBP24.72■■□□□ 1.55
NCKIPSD-209ENST00000470006 NEUROD2Q15784 382 aa24.72■■□□□ 1.55
NCKIPSD-209ENST00000470006 MYOZ2Q9NPC6 264 aa24.72■■□□□ 1.55
NCKIPSD-209ENST00000470006 PAPPA2Q9BXP8 1791 aa24.72■■□□□ 1.55
NCKIPSD-209ENST00000470006 COL4A1P02462 1669 aa24.72■■□□□ 1.55
NCKIPSD-209ENST00000470006 USP17L8P0C7I0 530 aa24.71■■□□□ 1.55
NCKIPSD-209ENST00000470006 MKRN3Q13064 507 aaKnown RBP24.71■■□□□ 1.55
NCKIPSD-209ENST00000470006 TMPOP42166 694 aaKnown RBP24.7■■□□□ 1.54
NCKIPSD-209ENST00000470006 PRAMEF18Q5VWM3 479 aa24.7■■□□□ 1.54
NCKIPSD-209ENST00000470006 SEC31BQ9NQW1 1179 aa24.7■■□□□ 1.54
NCKIPSD-209ENST00000470006 PODXL2Q9NZ53 605 aa24.7■■□□□ 1.54
NCKIPSD-209ENST00000470006 DBF4Q9UBU7 674 aaPredicted RBP24.69■■□□□ 1.54
NCKIPSD-209ENST00000470006 PITPNM2Q9BZ72 1349 aa24.68■■□□□ 1.54
NCKIPSD-209ENST00000470006 GPR25O00155 361 aa24.68■■□□□ 1.54
NCKIPSD-209ENST00000470006 HSP90B1P14625 803 aaKnown RBP24.68■■□□□ 1.54
NCKIPSD-209ENST00000470006 FBXO46Q6PJ61 603 aaPredicted RBP24.68■■□□□ 1.54
NCKIPSD-209ENST00000470006 USP17L3A6NCW0 530 aa24.67■■□□□ 1.54
NCKIPSD-209ENST00000470006 USP17L4A6NCW7 530 aa24.67■■□□□ 1.54
NCKIPSD-209ENST00000470006 NF2P35240 595 aa24.67■■□□□ 1.54
NCKIPSD-209ENST00000470006 USP17L1Q7RTZ2 530 aa24.67■■□□□ 1.54
NCKIPSD-209ENST00000470006 GCC1Q96CN9 775 aa24.67■■□□□ 1.54
NCKIPSD-209ENST00000470006 CCDC85AQ96PX6 553 aaPredicted RBP24.67■■□□□ 1.54
NCKIPSD-209ENST00000470006 RIC3Q7Z5B4 369 aa24.66■■□□□ 1.54
NCKIPSD-209ENST00000470006 HYPKQ9NX55 129 aa24.66■■□□□ 1.54
NCKIPSD-209ENST00000470006 CHL1O00533 1208 aa24.65■■□□□ 1.54
NCKIPSD-209ENST00000470006 TM4SF4P48230 202 aa24.65■■□□□ 1.54
NCKIPSD-209ENST00000470006 CCDC152Q4G0S7 254 aa24.65■■□□□ 1.54
NCKIPSD-209ENST00000470006 ZBTB38Q8NAP3 1195 aaPredicted RBP24.65■■□□□ 1.54
NCKIPSD-209ENST00000470006 FBXW7Q969H0 707 aa24.65■■□□□ 1.54
NCKIPSD-209ENST00000470006 FKTNO75072 461 aa24.64■■□□□ 1.54
NCKIPSD-209ENST00000470006 SREBF2Q12772 1141 aa24.64■■□□□ 1.54
NCKIPSD-209ENST00000470006 TRIM28Q13263 835 aaKnown RBP24.64■■□□□ 1.54
NCKIPSD-209ENST00000470006 NBPF9Q3BBW0 867 aa24.64■■□□□ 1.54
NCKIPSD-209ENST00000470006 PODNQ7Z5L7 613 aa24.63■■□□□ 1.53
NCKIPSD-209ENST00000470006 OGFOD1Q8N543 542 aa24.63■■□□□ 1.53
NCKIPSD-209ENST00000470006 GMLQ99445 158 aa24.63■■□□□ 1.53
NCKIPSD-209ENST00000470006 PSME4Q14997 1843 aa24.63■■□□□ 1.53
NCKIPSD-209ENST00000470006 XDHP47989 1333 aa24.62■■□□□ 1.53
NCKIPSD-209ENST00000470006 GOLGA2Q08379 1002 aa24.62■■□□□ 1.53
NCKIPSD-209ENST00000470006 PRKG1Q13976 671 aa24.62■■□□□ 1.53
NCKIPSD-209ENST00000470006 ANKRD18AQ8IVF6 992 aa24.62■■□□□ 1.53
NCKIPSD-209ENST00000470006 CCDC146Q8IYE0 955 aa24.62■■□□□ 1.53
NCKIPSD-209ENST00000470006 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.62■■□□□ 1.53
NCKIPSD-209ENST00000470006 ZNF609O15014 1411 aa24.61■■□□□ 1.53
NCKIPSD-209ENST00000470006 HOXB7P09629 217 aa24.61■■□□□ 1.53
NCKIPSD-209ENST00000470006 ATP2B4P23634 1241 aa24.61■■□□□ 1.53
NCKIPSD-209ENST00000470006 JARID2Q92833 1246 aaPredicted RBP24.61■■□□□ 1.53
NCKIPSD-209ENST00000470006 NOM1Q5C9Z4 860 aaKnown RBP24.6■■□□□ 1.53
NCKIPSD-209ENST00000470006 ARMC9Q7Z3E5 817 aa24.6■■□□□ 1.53
NCKIPSD-209ENST00000470006 MYD88Q99836 296 aa24.6■■□□□ 1.53
NCKIPSD-209ENST00000470006 PDE8AO60658 829 aa24.59■■□□□ 1.53
NCKIPSD-209ENST00000470006 DUSP27Q5VZP5 1158 aa24.59■■□□□ 1.53
NCKIPSD-209ENST00000470006 MXD3Q9BW11 206 aa24.59■■□□□ 1.53
NCKIPSD-209ENST00000470006 PTPN12Q05209 780 aaKnown RBP24.58■■□□□ 1.53
NCKIPSD-209ENST00000470006 R3HDMLQ9H3Y0 253 aa24.57■■□□□ 1.52
NCKIPSD-209ENST00000470006 WNT10BO00744 389 aa24.56■■□□□ 1.52
NCKIPSD-209ENST00000470006 TRIM17Q9Y577 477 aa24.56■■□□□ 1.52
NCKIPSD-209ENST00000470006 SASH1O94885 1247 aa24.55■■□□□ 1.52
NCKIPSD-209ENST00000470006 PCCAP05165 728 aaPredicted RBP24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms