RNA–Protein interactions for RNA: ENST00000462715.1

TRAPPC3-205, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 2,428 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-205ENST00000462715 LRP5O75197 1615 aa13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 BRPF1P55201 1214 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 U2AF2P26368 475 aaKnown RBP eCLIP13.7□□□□□ -0.226e-6■□□□□ 10.3
TRAPPC3-205ENST00000462715 TCIRG1Q13488 830 aa13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 PPP1R1BQ9UD71 204 aaPredicted RBP13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 MAP3K2Q9Y2U5 619 aa13.7□□□□□ -0.22
TRAPPC3-205ENST00000462715 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 POLRMTO00411 1230 aaKnown RBP13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 MMP14P50281 582 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 NEXNQ0ZGT2 675 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 PARP10Q53GL7 1025 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 RGS22Q8NE09 1264 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 ANKRD36CQ5JPF3 1778 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 ADCY9O60503 1353 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 DDR1Q08345 913 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 ZNF34Q8IZ26 560 aa13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 METTL22Q9BUU2 404 aaPredicted RBP13.69□□□□□ -0.22
TRAPPC3-205ENST00000462715 NPHP1O15259 732 aa13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 GPTP24298 496 aa13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 DNAAF4Q8WXU2 420 aa13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 NYXQ9GZU5 481 aa13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 FAM53CQ9NYF3 392 aa13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 SYCE3A1L190 88 aa13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 PRPF40AO75400 957 aaKnown RBP13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 CD2BP2O95400 341 aaKnown RBP13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 SERPINB2P05120 415 aa13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 NBPF5PQ86XG9 351 aaPredicted RBP13.68□□□□□ -0.22
TRAPPC3-205ENST00000462715 SRCAPQ6ZRS2 3230 aa13.67□□□□□ -0.22
TRAPPC3-205ENST00000462715 PPP1R42Q7Z4L9 355 aa13.67□□□□□ -0.22
TRAPPC3-205ENST00000462715 KIAA1524Q8TCG1 905 aa13.67□□□□□ -0.22
TRAPPC3-205ENST00000462715 MYD88Q99836 296 aa13.67□□□□□ -0.22
TRAPPC3-205ENST00000462715 GEMIN8Q9NWZ8 242 aaKnown RBP13.67□□□□□ -0.22
TRAPPC3-205ENST00000462715 RIOK3O14730 519 aaKnown RBP13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 TRIM28Q13263 835 aaKnown RBP13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 TPTE2Q6XPS3 522 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 KRT222Q8N1A0 295 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 CNBD1Q8NA66 436 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 ISCA1Q9BUE6 129 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 API5Q9BZZ5 524 aaKnown RBP13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 USP25Q9UHP3 1055 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 NOB1Q9ULX3 412 aaKnown RBP13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 UBN2Q6ZU65 1347 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 CHD1LQ86WJ1 897 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 ARHGAP45Q92619 1136 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 GCC1Q96CN9 775 aa13.66□□□□□ -0.22
TRAPPC3-205ENST00000462715 ATP5J2-PTCD1G3V325 749 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 ST5P78524 1137 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 NLRP10Q86W26 655 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 PLCD3Q8N3E9 789 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 NRXN2Q9P2S2 1712 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 SMTNL1A8MU46 457 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 F6X3S4 739 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 BRD2P25440 801 aaKnown RBP13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 CCDC191Q8NCU4 936 aa13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 ZFP91Q96JP5 570 aaPredicted RBP13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 UTP14AQ9BVJ6 771 aaKnown RBP13.65□□□□□ -0.22
TRAPPC3-205ENST00000462715 FAM177BA6PVY3 158 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 GOLGA6L6A8MZA4 724 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 LINS1Q8NG48 757 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 CWC25Q9NXE8 425 aaPredicted RBP13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 PAXBP1Q9Y5B6 917 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 AFDNP55196 1824 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 PXDNLA1KZ92 1463 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 CDC45O75419 566 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 SUSD4Q5VX71 490 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 PRR5LQ6MZQ0 368 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 TSC1Q92574 1164 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 C10orf71Q711Q0 1435 aa13.64□□□□□ -0.23
TRAPPC3-205ENST00000462715 RBM27Q9P2N5 1060 aaKnown RBP13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 TRMT112Q9UI30 125 aaKnown RBP13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 ST18O60284 1047 aa13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 NTSR2O95665 410 aa13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 AXDND1Q5T1B0 1012 aaPredicted RBP13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 KIF18AQ8NI77 898 aa13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 ZBTB40Q9NUA8 1239 aa13.63□□□□□ -0.23
TRAPPC3-205ENST00000462715 NEURL1BA8MQ27 555 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 IGKV5-2P06315 115 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 SLFNL1Q499Z3 407 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 ATF7IPQ6VMQ6 1270 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 SRCIN1Q9C0H9 1055 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 SH3TC1Q8TE82 1336 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 HSP90B1P14625 803 aaKnown RBP13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 CWF19L2Q2TBE0 894 aaKnown RBP13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 BEND3Q5T5X7 828 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 FOXD4L1Q9NU39 408 aa13.62□□□□□ -0.23
TRAPPC3-205ENST00000462715 ALDH1L1O75891 902 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 MCM2P49736 904 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 CCT4P50991 539 aaKnown RBP13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 BRIP1Q9BX63 1249 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 RAD50Q92878 1312 aa13.61□□□□□ -0.23
TRAPPC3-205ENST00000462715 ZBTB22O15209 634 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms