RNA–Protein interactions for RNA: ENST00000459584.1

SNORD42A-201, Transcript of small nucleolar RNA, C/D box 42A, humanhuman

BASIC

Gene SNORD42A, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42A-201ENST00000459584 PIK3R2O00459 728 aa6.97□□□□□ -1.29
SNORD42A-201ENST00000459584 BRD1O95696 1058 aa6.97□□□□□ -1.29
SNORD42A-201ENST00000459584 NID1P14543 1247 aa6.97□□□□□ -1.29
SNORD42A-201ENST00000459584 PDE12Q6L8Q7 609 aaKnown RBP6.97□□□□□ -1.29
SNORD42A-201ENST00000459584 TTC16Q8NEE8 873 aa6.97□□□□□ -1.29
SNORD42A-201ENST00000459584 CCER1Q8TC90 406 aaPredicted RBP6.97□□□□□ -1.29
SNORD42A-201ENST00000459584 PRDM6Q9NQX0 595 aa6.97□□□□□ -1.29
SNORD42A-201ENST00000459584 KRBA1A5PL33 1030 aa6.96□□□□□ -1.3
SNORD42A-201ENST00000459584 GHRHP01286 108 aa6.96□□□□□ -1.3
SNORD42A-201ENST00000459584 SOX18P35713 384 aa6.96□□□□□ -1.3
SNORD42A-201ENST00000459584 TRAPPC3LQ5T215 181 aa6.96□□□□□ -1.3
SNORD42A-201ENST00000459584 C1orf127Q8N9H9 656 aa6.96□□□□□ -1.3
SNORD42A-201ENST00000459584 KANSL3Q9P2N6 904 aa6.96□□□□□ -1.3
SNORD42A-201ENST00000459584 RPLP1P05386 114 aaKnown RBP6.95□□□□□ -1.3
SNORD42A-201ENST00000459584 ARHGAP4P98171 946 aa6.95□□□□□ -1.3
SNORD42A-201ENST00000459584 GRIK5Q16478 980 aa6.95□□□□□ -1.3
SNORD42A-201ENST00000459584 XKR5Q6UX68 686 aa6.95□□□□□ -1.3
SNORD42A-201ENST00000459584 DMRTC2Q8IXT2 367 aaPredicted RBP6.95□□□□□ -1.3
SNORD42A-201ENST00000459584 PLD4Q96BZ4 506 aa6.95□□□□□ -1.3
SNORD42A-201ENST00000459584 NOP53Q9NZM5 478 aaKnown RBP6.95□□□□□ -1.3
SNORD42A-201ENST00000459584 ATP11AP98196 1134 aa6.94□□□□□ -1.3
SNORD42A-201ENST00000459584 HYAL2Q12891 473 aa6.94□□□□□ -1.3
SNORD42A-201ENST00000459584 GDF6Q6KF10 455 aaPredicted RBP6.94□□□□□ -1.3
SNORD42A-201ENST00000459584 FRRS1LQ9P0K9 344 aa6.94□□□□□ -1.3
SNORD42A-201ENST00000459584 FOXD3Q9UJU5 478 aaPredicted RBP6.94□□□□□ -1.3
SNORD42A-201ENST00000459584 BRPF3Q9ULD4 1205 aa6.94□□□□□ -1.3
SNORD42A-201ENST00000459584 SOWAHDA6NJG2 315 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 ITGB2P05107 769 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 HOXD8P13378 290 aaPredicted RBP6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 CES1P23141 567 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 PLA2G4EQ3MJ16 856 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 NCAPG2Q86XI2 1143 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 GJD3Q8N144 294 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 RBSNQ9H1K0 784 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 CHRDQ9H2X0 955 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 TRIM33Q9UPN9 1127 aa6.93□□□□□ -1.3
SNORD42A-201ENST00000459584 TNFRSF21O75509 655 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 ACPPP15309 386 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 USP5P45974 858 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 MSL1Q68DK7 614 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 GPAT2Q6NUI2 795 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 TTC9Q92623 222 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 SPACA7Q96KW9 195 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 RASSF4Q9H2L5 321 aa6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 GNEQ9Y223 722 aaKnown RBP6.92□□□□□ -1.3
SNORD42A-201ENST00000459584 A0A0A0MRY4 1105 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 EREGO14944 169 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 TRPA1O75762 1119 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 KIF4AO95239 1232 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 GRIK4Q16099 956 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 PRRT3Q5FWE3 981 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 CEP135Q66GS9 1140 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 ADAMTSL4Q6UY14 1074 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 CEP120Q8N960 986 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 TRAIPQ9BWF2 469 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 BIN2Q9UBW5 565 aaPredicted RBP6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 IVNS1ABPQ9Y6Y0 642 aa6.91□□□□□ -1.3
SNORD42A-201ENST00000459584 SPDYE3A6NKU9 549 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 C1QTNF9BB2RNN3 333 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 PHACTR2O75167 634 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 SPATA31C1P0DKV0 1188 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 BAG6P46379 1132 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 EHHADHQ08426 723 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 WFDC8Q8IUA0 241 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 SALL4Q9UJQ4 1053 aa6.9□□□□□ -1.3
SNORD42A-201ENST00000459584 NDUFB5O43674 189 aa6.89□□□□□ -1.31
SNORD42A-201ENST00000459584 POLR3DP05423 398 aaPredicted RBP6.89□□□□□ -1.31
SNORD42A-201ENST00000459584 CHRNA4P43681 627 aa6.89□□□□□ -1.31
SNORD42A-201ENST00000459584 ILDR2Q71H61 639 aa6.89□□□□□ -1.31
SNORD42A-201ENST00000459584 ALYREFQ86V81 257 aaKnown RBP6.89□□□□□ -1.31
SNORD42A-201ENST00000459584 CD163Q86VB7 1156 aa6.89□□□□□ -1.31
SNORD42A-201ENST00000459584 TMC1Q8TDI8 760 aa6.89□□□□□ -1.31
SNORD42A-201ENST00000459584 CDC25BP30305 580 aa6.88□□□□□ -1.31
SNORD42A-201ENST00000459584 SNX29Q8TEQ0 813 aa6.88□□□□□ -1.31
SNORD42A-201ENST00000459584 HHIPQ96QV1 700 aa6.88□□□□□ -1.31
SNORD42A-201ENST00000459584 PBX4Q9BYU1 374 aa6.88□□□□□ -1.31
SNORD42A-201ENST00000459584 SMNDC1O75940 238 aaKnown RBP eCLIP6.87□□□□□ -1.312e-40■■■■■ 43.7
SNORD42A-201ENST00000459584 PDIA4P13667 645 aaKnown RBP6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 RAC1P63000 192 aa6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 KCNA1Q09470 495 aa6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 SHISA2Q6UWI4 295 aa6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 AEBP1Q8IUX7 1158 aa6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 FMR1NBQ8N0W7 255 aaPredicted RBP6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 PMEPA1Q969W9 287 aa6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 POP1Q99575 1024 aaKnown RBP6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 ZFYVE28Q9HCC9 887 aa6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 LATS2Q9NRM7 1088 aa6.87□□□□□ -1.31
SNORD42A-201ENST00000459584 DEAF1O75398 565 aaPredicted RBP6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 APBA3O96018 575 aa6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 ORC1Q13415 861 aa6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 USPL1Q5W0Q7 1092 aa6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 TXNDC11Q6PKC3 985 aa6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 FAM129BQ96TA1 746 aa6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 SPOCK3Q9BQ16 436 aa6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 NIF3L1Q9GZT8 377 aa6.86□□□□□ -1.31
SNORD42A-201ENST00000459584 DZANK1Q9NVP4 752 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 252.1 ms