RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 CASP7P55210 303 aa22.2■■□□□ 1.14
SCARNA2-201ENST00000458748 ALDH1L2Q3SY69 923 aa22.2■■□□□ 1.14
SCARNA2-201ENST00000458748 COL13A1Q5TAT6 717 aaPredicted RBP22.2■■□□□ 1.14
SCARNA2-201ENST00000458748 MIER1Q8N108 512 aa22.2■■□□□ 1.14
SCARNA2-201ENST00000458748 C9orf78Q9NZ63 289 aaPredicted RBP22.2■■□□□ 1.14
SCARNA2-201ENST00000458748 HSPA1AP0DMV8 641 aaKnown RBP22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 HSPA1BP0DMV9 641 aaKnown RBP22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 IGHMBP2P38935 993 aaKnown RBP22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 MAP1SQ66K74 1059 aaPredicted RBP22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 SLC4A10Q6U841 1118 aa22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 USP50Q70EL3 339 aaPredicted RBP22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 CDCA7LQ96GN5 454 aa22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 SRCIN1Q9C0H9 1055 aa22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 GPRC5DQ9NZD1 345 aa22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 GGA1Q9UJY5 639 aa22.19■■□□□ 1.14
SCARNA2-201ENST00000458748 EPS15P42566 896 aa22.18■■□□□ 1.14
SCARNA2-201ENST00000458748 TRMT2AQ8IZ69 625 aaKnown RBP22.18■■□□□ 1.14
SCARNA2-201ENST00000458748 MRPL50Q8N5N7 158 aaKnown RBP22.18■■□□□ 1.14
SCARNA2-201ENST00000458748 ZC3H12CQ9C0D7 883 aaKnown RBP22.18■■□□□ 1.14
SCARNA2-201ENST00000458748 GREM2Q9H772 168 aa22.18■■□□□ 1.14
SCARNA2-201ENST00000458748 BSDC1Q9NW68 430 aaPredicted RBP22.18■■□□□ 1.14
SCARNA2-201ENST00000458748 XDHP47989 1333 aa22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 YDJCA8MPS7 323 aa22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 G3V3G9 751 aa22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 GRM8O00222 908 aa22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 RIMBP2O15034 1052 aa22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 RAD17O75943 681 aa22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 DCAF8Q5TAQ9 597 aa22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 ADARB2Q9NS39 739 aaKnown RBP22.17■■□□□ 1.14
SCARNA2-201ENST00000458748 SPEF2Q9C093 1822 aa22.16■■□□□ 1.14
SCARNA2-201ENST00000458748 UFL1O94874 794 aa22.16■■□□□ 1.14
SCARNA2-201ENST00000458748 CSF1RP07333 972 aa22.16■■□□□ 1.14
SCARNA2-201ENST00000458748 GMPSP49915 693 aaPredicted RBP22.16■■□□□ 1.14
SCARNA2-201ENST00000458748 CNTROBQ8N137 903 aa22.16■■□□□ 1.14
SCARNA2-201ENST00000458748 SSH1Q8WYL5 1049 aa22.16■■□□□ 1.14
SCARNA2-201ENST00000458748 SMC4Q9NTJ3 1288 aa22.16■■□□□ 1.14
SCARNA2-201ENST00000458748 TMEM88BA6NKF7 163 aa22.15■■□□□ 1.14
SCARNA2-201ENST00000458748 ATP2B4P23634 1241 aa22.15■■□□□ 1.14
SCARNA2-201ENST00000458748 MPHOSPH8Q99549 860 aa22.15■■□□□ 1.14
SCARNA2-201ENST00000458748 BCL2L13Q9BXK5 485 aa22.15■■□□□ 1.14
SCARNA2-201ENST00000458748 DBNDD1Q9H9R9 158 aa22.15■■□□□ 1.14
SCARNA2-201ENST00000458748 CNTNAP1P78357 1384 aa22.14■■□□□ 1.14
SCARNA2-201ENST00000458748 ANKRD18BA2A2Z9 1011 aa22.14■■□□□ 1.13
SCARNA2-201ENST00000458748 ECE2O60344 883 aa22.14■■□□□ 1.13
SCARNA2-201ENST00000458748 ITGA6P23229 1130 aa22.14■■□□□ 1.13
SCARNA2-201ENST00000458748 MINPP1Q9UNW1 487 aa22.14■■□□□ 1.13
SCARNA2-201ENST00000458748 DPF2Q92785 391 aa22.13■■□□□ 1.13
SCARNA2-201ENST00000458748 ANKRD2Q9GZV1 360 aa22.13■■□□□ 1.13
SCARNA2-201ENST00000458748 CHMP3Q9Y3E7 222 aa22.13■■□□□ 1.13
SCARNA2-201ENST00000458748 RPS12P25398 132 aaKnown RBP22.12■■□□□ 1.13
SCARNA2-201ENST00000458748 IFIT5Q13325 482 aaKnown RBP22.12■■□□□ 1.13
SCARNA2-201ENST00000458748 DOK7Q18PE1 504 aa22.12■■□□□ 1.13
SCARNA2-201ENST00000458748 FAM161AQ3B820 660 aa22.12■■□□□ 1.13
SCARNA2-201ENST00000458748 H7C1D1 291 aa22.11■■□□□ 1.13
SCARNA2-201ENST00000458748 PSMD14O00487 310 aa22.11■■□□□ 1.13
SCARNA2-201ENST00000458748 GPR101Q96P66 508 aaPredicted RBP22.11■■□□□ 1.13
SCARNA2-201ENST00000458748 CNOT7Q9UIV1 285 aaKnown RBP22.11■■□□□ 1.13
SCARNA2-201ENST00000458748 PSME4Q14997 1843 aa22.1■■□□□ 1.13
SCARNA2-201ENST00000458748 FOXO4P98177 505 aa22.1■■□□□ 1.13
SCARNA2-201ENST00000458748 HNRNPUQ00839 825 aaKnown RBP eCLIP22.1■■□□□ 1.13
SCARNA2-201ENST00000458748 CCDC57Q2TAC2 916 aa22.1■■□□□ 1.13
SCARNA2-201ENST00000458748 ZC3H15Q8WU90 426 aaKnown RBP22.1■■□□□ 1.13
SCARNA2-201ENST00000458748 PCNTO95613 3336 aa22.1■■□□□ 1.13
SCARNA2-201ENST00000458748 SCN9AQ15858 1988 aa22.1■■□□□ 1.13
SCARNA2-201ENST00000458748 VEGFBP49765 207 aa22.09■■□□□ 1.13
SCARNA2-201ENST00000458748 CCT4P50991 539 aaKnown RBP22.09■■□□□ 1.13
SCARNA2-201ENST00000458748 TAF7LQ5H9L4 462 aa22.09■■□□□ 1.13
SCARNA2-201ENST00000458748 PGAP2Q9UHJ9 254 aa22.09■■□□□ 1.13
SCARNA2-201ENST00000458748 LEMD3Q9Y2U8 911 aa22.09■■□□□ 1.13
SCARNA2-201ENST00000458748 MED23Q9ULK4 1368 aa22.09■■□□□ 1.13
SCARNA2-201ENST00000458748 VIL1P09327 827 aaKnown RBP22.08■■□□□ 1.13
SCARNA2-201ENST00000458748 FMR1Q06787 632 aaKnown RBP eCLIP22.08■■□□□ 1.13
SCARNA2-201ENST00000458748 LMBR1LQ6UX01 489 aa22.08■■□□□ 1.13
SCARNA2-201ENST00000458748 PODNQ7Z5L7 613 aa22.08■■□□□ 1.13
SCARNA2-201ENST00000458748 API5Q9BZZ5 524 aaKnown RBP22.08■■□□□ 1.13
SCARNA2-201ENST00000458748 ZNF609O15014 1411 aa22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 TRPM7Q96QT4 1865 aa22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 KCNJ4P48050 445 aa22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 BRPF1P55201 1214 aaPredicted RBP22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 MICALL2Q8IY33 904 aa22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 TNS4Q8IZW8 715 aa22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 KCNQ5Q9NR82 932 aa22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 ZBTB12Q9Y330 459 aaPredicted RBP22.07■■□□□ 1.12
SCARNA2-201ENST00000458748 UTYO14607 1347 aa22.06■■□□□ 1.12
SCARNA2-201ENST00000458748 KIF16BQ96L93 1317 aa22.06■■□□□ 1.12
SCARNA2-201ENST00000458748 TRAF5O00463 557 aa22.05■■□□□ 1.12
SCARNA2-201ENST00000458748 ABT1Q9ULW3 272 aaKnown RBP22.05■■□□□ 1.12
SCARNA2-201ENST00000458748 HDAC5Q9UQL6 1122 aa22.05■■□□□ 1.12
SCARNA2-201ENST00000458748 RASSF10A6NK89 507 aa22.04■■□□□ 1.12
SCARNA2-201ENST00000458748 NBPF7P0C2Y1 421 aaPredicted RBP22.04■■□□□ 1.12
SCARNA2-201ENST00000458748 HIRAP54198 1017 aaPredicted RBP22.04■■□□□ 1.12
SCARNA2-201ENST00000458748 DEFB115Q30KQ5 88 aa22.04■■□□□ 1.12
SCARNA2-201ENST00000458748 AGBL3Q8NEM8 1001 aa22.04■■□□□ 1.12
SCARNA2-201ENST00000458748 ZNF804BA4D1E1 1349 aa22.04■■□□□ 1.12
SCARNA2-201ENST00000458748 FOXN1O15353 648 aa22.03■■□□□ 1.12
SCARNA2-201ENST00000458748 RARSP54136 660 aaKnown RBP22.03■■□□□ 1.12
SCARNA2-201ENST00000458748 CHRNDQ07001 517 aa22.03■■□□□ 1.12
SCARNA2-201ENST00000458748 EPHA10Q5JZY3 1008 aa22.03■■□□□ 1.12
SCARNA2-201ENST00000458748 RSBN1LQ6PCB5 846 aaPredicted RBP22.03■■□□□ 1.12
SCARNA2-201ENST00000458748 LDHAL6AQ6ZMR3 332 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms