RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 NPR3P17342 541 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 COL8A1P27658 744 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 SERPINB4P48594 390 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 FKBP4Q02790 459 aaKnown RBP eCLIP7.24□□□□□ -1.25
LINC00393-202ENST00000452852 DNM1Q05193 864 aaKnown RBP7.24□□□□□ -1.25
LINC00393-202ENST00000452852 SF3B2Q13435 895 aaKnown RBP7.24□□□□□ -1.25
LINC00393-202ENST00000452852 FAM35AQ86V20 835 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 NUDT8Q8WV74 236 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 FOXD4L4Q8WXT5 416 aaPredicted RBP7.24□□□□□ -1.25
LINC00393-202ENST00000452852 EDEM1Q92611 657 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 TRIM11Q96F44 468 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 SEMA6BQ9H3T3 888 aa7.24□□□□□ -1.25
LINC00393-202ENST00000452852 PIK3R2O00459 728 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 FAM13AO94988 1023 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 NRLP54845 237 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 GPLD1P80108 840 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 COL9A3Q14050 684 aaPredicted RBP7.23□□□□□ -1.25
LINC00393-202ENST00000452852 PCSK7Q16549 785 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 ALKBH2Q6NS38 261 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 PSAPL1Q6NUJ1 521 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 HFE2Q6ZVN8 426 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 PLVAPQ9BX97 442 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 PRDM6Q9NQX0 595 aa7.23□□□□□ -1.25
LINC00393-202ENST00000452852 PDGFAP04085 211 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 PSAPP07602 524 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 MZF1P28698 734 aaPredicted RBP7.22□□□□□ -1.25
LINC00393-202ENST00000452852 PLAURQ03405 335 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 AAMPQ13685 434 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 NBPF11Q86T75 865 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 TXNDC2Q86VQ3 553 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 GGNBP2Q9H3C7 697 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
LINC00393-202ENST00000452852 EGFL7Q9UHF1 273 aa7.22□□□□□ -1.25
LINC00393-202ENST00000452852 J3QW42 95 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 ICMTO60725 284 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 LILRB5O75023 590 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 RGS9O75916 674 aaPredicted RBP7.21□□□□□ -1.26
LINC00393-202ENST00000452852 PCSK2P16519 638 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 SOX18P35713 384 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 PERM1Q5SV97 790 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 ZNF428Q96B54 188 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 NSUN5Q96P11 429 aaKnown RBP7.21□□□□□ -1.26
LINC00393-202ENST00000452852 POLIQ9UNA4 740 aa7.21□□□□□ -1.26
LINC00393-202ENST00000452852 LOC102724428A0A0B4J2F2 783 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 A6NHS1 94 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 FZD6O60353 706 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 RPLP1P05386 114 aaKnown RBP7.2□□□□□ -1.26
LINC00393-202ENST00000452852 NID1P14543 1247 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 SIK1P57059 783 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 C8orf34Q49A92 452 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 TTC39BQ5VTQ0 682 aaPredicted RBP7.2□□□□□ -1.26
LINC00393-202ENST00000452852 ELMSAN1Q6PJG2 1045 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 OR13H1Q8NG92 308 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 LPIN3Q9BQK8 851 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 ELP3Q9H9T3 547 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 CCDC87Q9NVE4 849 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 ABI2Q9NYB9 513 aaPredicted RBP7.2□□□□□ -1.26
LINC00393-202ENST00000452852 NOP53Q9NZM5 478 aaKnown RBP7.2□□□□□ -1.26
LINC00393-202ENST00000452852 TMEM63CQ9P1W3 806 aa7.2□□□□□ -1.26
LINC00393-202ENST00000452852 H3BRB1 525 aa7.19□□□□□ -1.26
LINC00393-202ENST00000452852 BRD1O95696 1058 aa7.19□□□□□ -1.26
LINC00393-202ENST00000452852 HOXD8P13378 290 aaPredicted RBP7.19□□□□□ -1.26
LINC00393-202ENST00000452852 EIF2AK2P19525 551 aaKnown RBP7.19□□□□□ -1.26
LINC00393-202ENST00000452852 AFF1P51825 1210 aaKnown RBP7.19□□□□□ -1.26
LINC00393-202ENST00000452852 PDE12Q6L8Q7 609 aaKnown RBP7.19□□□□□ -1.26
LINC00393-202ENST00000452852 ZNF438Q7Z4V0 828 aa7.19□□□□□ -1.26
LINC00393-202ENST00000452852 SMG9Q9H0W8 520 aaKnown RBP7.19□□□□□ -1.26
LINC00393-202ENST00000452852 TUT1Q9H6E5 874 aaKnown RBP7.19□□□□□ -1.26
LINC00393-202ENST00000452852 FRRS1LQ9P0K9 344 aa7.19□□□□□ -1.26
LINC00393-202ENST00000452852 CYP2E1P05181 493 aaPredicted RBP7.18□□□□□ -1.26
LINC00393-202ENST00000452852 KCNA1Q09470 495 aa7.18□□□□□ -1.26
LINC00393-202ENST00000452852 ECM1Q16610 540 aa7.18□□□□□ -1.26
LINC00393-202ENST00000452852 COL13A1Q5TAT6 717 aaPredicted RBP7.18□□□□□ -1.26
LINC00393-202ENST00000452852 XKR5Q6UX68 686 aa7.18□□□□□ -1.26
LINC00393-202ENST00000452852 GLYCTKQ8IVS8 523 aa7.18□□□□□ -1.26
LINC00393-202ENST00000452852 TTC16Q8NEE8 873 aa7.18□□□□□ -1.26
LINC00393-202ENST00000452852 ZFP64Q9NPA5 681 aa7.18□□□□□ -1.26
LINC00393-202ENST00000452852 RBM25P49756 843 aaKnown RBP7.17□□□□□ -1.26
LINC00393-202ENST00000452852 GRIK5Q16478 980 aa7.17□□□□□ -1.26
LINC00393-202ENST00000452852 TRAPPC3LQ5T215 181 aa7.17□□□□□ -1.26
LINC00393-202ENST00000452852 CCER1Q8TC90 406 aaPredicted RBP7.17□□□□□ -1.26
LINC00393-202ENST00000452852 PLD4Q96BZ4 506 aa7.17□□□□□ -1.26
LINC00393-202ENST00000452852 CNTN3Q9P232 1028 aa7.17□□□□□ -1.26
LINC00393-202ENST00000452852 SPDYE3A6NKU9 549 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 C1QTNF9BB2RNN3 333 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 PATL2C9JE40 543 aaKnown RBP7.16□□□□□ -1.26
LINC00393-202ENST00000452852 FAM229AH3BQW9 127 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 GHRHP01286 108 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 ARHGAP4P98171 946 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 HYAL2Q12891 473 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 KRTAP19-1Q8IUB9 90 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 TTC9Q92623 222 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 IVNS1ABPQ9Y6Y0 642 aa7.16□□□□□ -1.26
LINC00393-202ENST00000452852 COBLO75128 1261 aa7.15□□□□□ -1.26
LINC00393-202ENST00000452852 ITGB7P26010 798 aa7.15□□□□□ -1.26
LINC00393-202ENST00000452852 USP5P45974 858 aa7.15□□□□□ -1.26
LINC00393-202ENST00000452852 DMRTC2Q8IXT2 367 aaPredicted RBP7.15□□□□□ -1.26
LINC00393-202ENST00000452852 GJD3Q8N144 294 aa7.15□□□□□ -1.26
LINC00393-202ENST00000452852 C1orf127Q8N9H9 656 aa7.15□□□□□ -1.26
LINC00393-202ENST00000452852 RBSNQ9H1K0 784 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 99.4 ms