RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 PREX1Q8TCU6 1659 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 CPSF1Q10570 1443 aaKnown RBP21.63■■□□□ 1.05
PTPA-223ENST00000452489 CTAGE5O15320 804 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 TXLNAP40222 546 aa21.63■■□□□ 1.05
PTPA-223ENST00000452489 SAMD1Q6SPF0 538 aaPredicted RBP21.63■■□□□ 1.05
PTPA-223ENST00000452489 FTOQ9C0B1 505 aaKnown RBP eCLIP21.63■■□□□ 1.05
PTPA-223ENST00000452489 ADGRL3Q9HAR2 1447 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 CCP110O43303 1012 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 GOLGA1Q92805 767 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 DEPDC5O75140 1603 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 HECW2Q9P2P5 1572 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 AOX1Q06278 1338 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 A0A087WUV0 522 aaPredicted RBP21.62■■□□□ 1.05
PTPA-223ENST00000452489 PSME1Q06323 249 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 STK3Q13188 491 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 BEND6Q5SZJ8 279 aaPredicted RBP21.62■■□□□ 1.05
PTPA-223ENST00000452489 FMNL2Q96PY5 1086 aa21.62■■□□□ 1.05
PTPA-223ENST00000452489 ANKRD26Q9UPS8 1709 aa21.61■■□□□ 1.05
PTPA-223ENST00000452489 RAB11FIP3O75154 756 aa21.61■■□□□ 1.05
PTPA-223ENST00000452489 GNG11P61952 73 aa21.61■■□□□ 1.05
PTPA-223ENST00000452489 TERF2IPQ9NYB0 399 aa21.61■■□□□ 1.05
PTPA-223ENST00000452489 DLG5Q8TDM6 1919 aa21.61■■□□□ 1.05
PTPA-223ENST00000452489 ASXL2Q76L83 1435 aa21.61■■□□□ 1.05
PTPA-223ENST00000452489 LIG3P49916 1009 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 ATP8B2P98198 1209 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 RESTQ13127 1097 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 BRD3Q15059 726 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 NUTM2DQ5VT03 806 aaPredicted RBP21.6■■□□□ 1.05
PTPA-223ENST00000452489 KCNV1Q6PIU1 500 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 HDXQ7Z353 690 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 DHX58Q96C10 678 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 MPHOSPH8Q99549 860 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 TM6SF1Q9BZW5 370 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 NAT10Q9H0A0 1025 aaKnown RBP21.6■■□□□ 1.05
PTPA-223ENST00000452489 ZFYVE9O95405 1425 aa21.6■■□□□ 1.05
PTPA-223ENST00000452489 CAMSAP1Q5T5Y3 1602 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 CCDC196A0A1B0GTZ2 297 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 KINO60870 393 aaKnown RBP21.59■■□□□ 1.05
PTPA-223ENST00000452489 PPFIA4O75335 1185 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 HNRNPH1P31943 449 aaKnown RBP21.59■■□□□ 1.05
PTPA-223ENST00000452489 CCT4P50991 539 aaKnown RBP21.59■■□□□ 1.05
PTPA-223ENST00000452489 PTPN21Q16825 1174 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 DPCR1Q3MIW9 517 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 KIF3BO15066 747 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 JAKMIP3Q5VZ66 844 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 FBXW10Q5XX13 1052 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 AFAP1Q8N556 730 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 EMILIN1Q9Y6C2 1016 aa21.59■■□□□ 1.05
PTPA-223ENST00000452489 JAK2O60674 1132 aa21.58■■□□□ 1.05
PTPA-223ENST00000452489 ERLIN2O94905 339 aa21.58■■□□□ 1.05
PTPA-223ENST00000452489 CNTROBQ8N137 903 aa21.58■■□□□ 1.05
PTPA-223ENST00000452489 CCDC102AQ96A19 550 aa21.58■■□□□ 1.05
PTPA-223ENST00000452489 SENP3Q9H4L4 574 aaPredicted RBP21.58■■□□□ 1.05
PTPA-223ENST00000452489 ABCA9Q8IUA7 1624 aa21.58■■□□□ 1.05
PTPA-223ENST00000452489 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.58■■□□□ 1.04
PTPA-223ENST00000452489 ANKZF1Q9H8Y5 726 aa21.58■■□□□ 1.04
PTPA-223ENST00000452489 GIGYF1O75420 1035 aaPredicted RBP21.57■■□□□ 1.04
PTPA-223ENST00000452489 IL13P35225 146 aa21.57■■□□□ 1.04
PTPA-223ENST00000452489 CCDC73Q6ZRK6 1079 aa21.57■■□□□ 1.04
PTPA-223ENST00000452489 PNKPQ96T60 521 aa21.57■■□□□ 1.04
PTPA-223ENST00000452489 FAM204AQ9H8W3 233 aa21.57■■□□□ 1.04
PTPA-223ENST00000452489 PPP2R2CQ9Y2T4 447 aa21.57■■□□□ 1.04
PTPA-223ENST00000452489 EIF3JO75822 258 aaKnown RBP21.56■■□□□ 1.04
PTPA-223ENST00000452489 SCP2P22307 547 aa21.56■■□□□ 1.04
PTPA-223ENST00000452489 BRF1Q92994 677 aa21.56■■□□□ 1.04
PTPA-223ENST00000452489 CLIC6Q96NY7 704 aa21.56■■□□□ 1.04
PTPA-223ENST00000452489 ABCB6Q9NP58 842 aa21.56■■□□□ 1.04
PTPA-223ENST00000452489 ABCC3O15438 1527 aa21.56■■□□□ 1.04
PTPA-223ENST00000452489 KIFC2Q96AC6 838 aa21.56■■□□□ 1.04
PTPA-223ENST00000452489 EIF5P55010 431 aaKnown RBP21.55■■□□□ 1.04
PTPA-223ENST00000452489 ENGASEQ8NFI3 743 aa21.55■■□□□ 1.04
PTPA-223ENST00000452489 L1RE1Q9UN81 338 aa21.55■■□□□ 1.04
PTPA-223ENST00000452489 EXOC5O00471 708 aa21.55■■□□□ 1.04
PTPA-223ENST00000452489 SETD1AO15047 1707 aaKnown RBP21.55■■□□□ 1.04
PTPA-223ENST00000452489 HAP1P54257 671 aaPredicted RBP21.55■■□□□ 1.04
PTPA-223ENST00000452489 MCM10Q7L590 875 aa21.55■■□□□ 1.04
PTPA-223ENST00000452489 HNRNPLLQ8WVV9 542 aaKnown RBP21.55■■□□□ 1.04
PTPA-223ENST00000452489 CFAP45Q9UL16 551 aa21.55■■□□□ 1.04
PTPA-223ENST00000452489 ATP1A3P13637 1013 aa21.54■■□□□ 1.04
PTPA-223ENST00000452489 LMOD1P29536 600 aaPredicted RBP21.54■■□□□ 1.04
PTPA-223ENST00000452489 PPP2R5AQ15172 486 aa21.54■■□□□ 1.04
PTPA-223ENST00000452489 NECTIN1Q15223 517 aa21.54■■□□□ 1.04
PTPA-223ENST00000452489 PUF60Q9UHX1 559 aaKnown RBP21.54■■□□□ 1.04
PTPA-223ENST00000452489 ZSCAN12O43309 604 aa21.54■■□□□ 1.04
PTPA-223ENST00000452489 ARHGEF28Q8N1W1 1705 aaKnown RBP21.54■■□□□ 1.04
PTPA-223ENST00000452489 BIN1O00499 593 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 CHL1O00533 1208 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 ZKSCAN1P17029 563 aaPredicted RBP21.53■■□□□ 1.04
PTPA-223ENST00000452489 FOSBP53539 338 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 CHMP4BP1P59074 171 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 FAM160A1Q05DH4 1040 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 HSP90B2PQ58FF3 399 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 CREB3L3Q68CJ9 461 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 RPAINQ86UA6 219 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 FSIP1Q8NA03 581 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 FAM71BQ8TC56 605 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 KCNB2Q92953 911 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 MIS18AQ9NYP9 233 aa21.53■■□□□ 1.04
PTPA-223ENST00000452489 ADD1P35611 737 aaKnown RBP21.53■■□□□ 1.04
PTPA-223ENST00000452489 DPF2Q92785 391 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms