RNA–Protein interactions for RNA: ENST00000451871.1

KARSP1-201, Transcript of lysyl-tRNA synthetase pseudogene 1, humanhuman

BASIC

Gene KARSP1, Length 1,752 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARSP1-201ENST00000451871 PLEKHG2Q9H7P9 1386 aa8.52□□□□□ -1.05
KARSP1-201ENST00000451871 KIAA1551Q9HCM1 1747 aa8.52□□□□□ -1.05
KARSP1-201ENST00000451871 SBF1O95248 1867 aa8.51□□□□□ -1.05
KARSP1-201ENST00000451871 ZBBXA8MT70 800 aa8.51□□□□□ -1.05
KARSP1-201ENST00000451871 TGFB2P61812 414 aa8.51□□□□□ -1.05
KARSP1-201ENST00000451871 KCNH2Q12809 1159 aa8.51□□□□□ -1.05
KARSP1-201ENST00000451871 PNMA1Q8ND90 353 aa8.51□□□□□ -1.05
KARSP1-201ENST00000451871 ZCRB1Q8TBF4 217 aaKnown RBP8.51□□□□□ -1.05
KARSP1-201ENST00000451871 BRCA1P38398 1863 aaKnown RBP8.51□□□□□ -1.05
KARSP1-201ENST00000451871 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
KARSP1-201ENST00000451871 TOGARAM1Q9Y4F4 1720 aa8.51□□□□□ -1.05
KARSP1-201ENST00000451871 OCSTAMPQ9BR26 566 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 ARFGEF1Q9Y6D6 1849 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 USP31Q70CQ4 1352 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 KTN1Q86UP2 1357 aaKnown RBP8.5□□□□□ -1.05
KARSP1-201ENST00000451871 UNCXA6NJT0 531 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 PIK3CDO00329 1044 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 ATP9BO43861 1147 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 SOX11P35716 441 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 STK32AQ8WU08 396 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 MKRN1Q9UHC7 482 aaKnown RBP8.5□□□□□ -1.05
KARSP1-201ENST00000451871 ZMIZ1Q9ULJ6 1067 aa8.5□□□□□ -1.05
KARSP1-201ENST00000451871 EVC2Q86UK5 1308 aa8.49□□□□□ -1.05
KARSP1-201ENST00000451871 SSFA2P28290 1259 aa8.49□□□□□ -1.05
KARSP1-201ENST00000451871 EIF4G2P78344 907 aaKnown RBP eCLIP8.49□□□□□ -1.05
KARSP1-201ENST00000451871 TMEM164Q5U3C3 297 aa8.49□□□□□ -1.05
KARSP1-201ENST00000451871 PTCRAQ6ISU1 281 aaPredicted RBP8.49□□□□□ -1.05
KARSP1-201ENST00000451871 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.49□□□□□ -1.05
KARSP1-201ENST00000451871 NKX2-3Q8TAU0 364 aa8.49□□□□□ -1.05
KARSP1-201ENST00000451871 LTV1Q96GA3 475 aaPredicted RBP8.49□□□□□ -1.05
KARSP1-201ENST00000451871 RGPD2P0DJD1 1756 aa8.49□□□□□ -1.05
KARSP1-201ENST00000451871 FAM208AQ9UK61 1670 aaKnown RBP8.49□□□□□ -1.05
KARSP1-201ENST00000451871 PALLDQ8WX93 1383 aa8.49□□□□□ -1.05
KARSP1-201ENST00000451871 MMP10P09238 476 aa8.48□□□□□ -1.05
KARSP1-201ENST00000451871 IP6K1Q92551 441 aa8.48□□□□□ -1.05
KARSP1-201ENST00000451871 IL21Q9HBE4 155 aa8.48□□□□□ -1.05
KARSP1-201ENST00000451871 GNEQ9Y223 722 aaKnown RBP8.48□□□□□ -1.05
KARSP1-201ENST00000451871 ZC3H4Q9UPT8 1303 aaKnown RBP8.48□□□□□ -1.05
KARSP1-201ENST00000451871 NSD3Q9BZ95 1437 aa8.48□□□□□ -1.05
KARSP1-201ENST00000451871 DPEP1P16444 411 aa8.48□□□□□ -1.05
KARSP1-201ENST00000451871 NME9Q86XW9 330 aa8.48□□□□□ -1.05
KARSP1-201ENST00000451871 RNF181Q9P0P0 153 aa8.48□□□□□ -1.05
KARSP1-201ENST00000451871 ITGB4P16144 1822 aa8.47□□□□□ -1.05
KARSP1-201ENST00000451871 MPRIPQ6WCQ1 1025 aa8.47□□□□□ -1.05
KARSP1-201ENST00000451871 CCDC24Q8N4L8 307 aa8.47□□□□□ -1.05
KARSP1-201ENST00000451871 SLC6A16Q9GZN6 736 aa8.47□□□□□ -1.05
KARSP1-201ENST00000451871 UNC93B1Q9H1C4 597 aa8.47□□□□□ -1.05
KARSP1-201ENST00000451871 MON2Q7Z3U7 1717 aa8.47□□□□□ -1.05
KARSP1-201ENST00000451871 MEGF6O75095 1541 aa8.46□□□□□ -1.05
KARSP1-201ENST00000451871 HSPA8P11142 646 aaKnown RBP8.46□□□□□ -1.05
KARSP1-201ENST00000451871 KCNA3P22001 575 aa8.46□□□□□ -1.05
KARSP1-201ENST00000451871 PHLDB3Q6NSJ2 640 aa8.46□□□□□ -1.05
KARSP1-201ENST00000451871 S1PR4O95977 384 aa8.45□□□□□ -1.06
KARSP1-201ENST00000451871 VEGFAP15692 232 aaPredicted RBP8.45□□□□□ -1.06
KARSP1-201ENST00000451871 PDXDC2PQ6P474 469 aa8.45□□□□□ -1.06
KARSP1-201ENST00000451871 SMARCC1Q92922 1105 aaPredicted RBP8.45□□□□□ -1.06
KARSP1-201ENST00000451871 MAP2P11137 1827 aaKnown RBP8.45□□□□□ -1.06
KARSP1-201ENST00000451871 LINC00116Q8NCU8 138 aa8.45□□□□□ -1.06
KARSP1-201ENST00000451871 DCAF5Q96JK2 942 aa8.45□□□□□ -1.06
KARSP1-201ENST00000451871 PIM2Q9P1W9 311 aa8.45□□□□□ -1.06
KARSP1-201ENST00000451871 CCDC88AQ3V6T2 1871 aa8.45□□□□□ -1.06
KARSP1-201ENST00000451871 CUL9Q8IWT3 2517 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 DLL1O00548 723 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 DEPDC4Q8N2C3 294 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 NLGN1Q8N2Q7 840 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 ARMC2Q8NEN0 867 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 CCDC87Q9NVE4 849 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 CGNL1Q0VF96 1302 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 CNTNAP1P78357 1384 aa8.44□□□□□ -1.06
KARSP1-201ENST00000451871 GLTPD2A6NH11 291 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 TMF1P82094 1093 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 PTK2Q05397 1052 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 GPKOWQ92917 476 aaPredicted RBP eCLIP8.43□□□□□ -1.06
KARSP1-201ENST00000451871 NOVA2Q9UNW9 492 aaKnown RBP8.43□□□□□ -1.06
KARSP1-201ENST00000451871 SBNO2Q9Y2G9 1366 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 CASP8AP2Q9UKL3 1982 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 HOXC9P31274 260 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 SIK1P57059 783 aa8.43□□□□□ -1.06
KARSP1-201ENST00000451871 ELOAQ14241 798 aaKnown RBP8.43□□□□□ -1.06
KARSP1-201ENST00000451871 DALRD3Q5D0E6 543 aaKnown RBP8.43□□□□□ -1.06
KARSP1-201ENST00000451871 FCF1Q9Y324 198 aaKnown RBP8.43□□□□□ -1.06
KARSP1-201ENST00000451871 RAB3GAP2Q9H2M9 1393 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 USP17L3A6NCW0 530 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 USP17L4A6NCW7 530 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 NBPF6Q5VWK0 638 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 USP17L2Q6R6M4 530 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 SH3BP5LQ7L8J4 393 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 USP17L1Q7RTZ2 530 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 ADAM32Q8TC27 787 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 RAPGEF4Q8WZA2 1011 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 PIGBQ92521 554 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 NBPF4Q96M43 638 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 C4AP0C0L4 1744 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 TIAM2Q8IVF5 1701 aa8.42□□□□□ -1.06
KARSP1-201ENST00000451871 PCDH11XQ9BZA7 1347 aa8.41□□□□□ -1.06
KARSP1-201ENST00000451871 PCDH11YQ9BZA8 1340 aa8.41□□□□□ -1.06
KARSP1-201ENST00000451871 AMPHP49418 695 aa8.41□□□□□ -1.06
KARSP1-201ENST00000451871 ITPK1Q13572 414 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms