RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 UPF3BQ9BZI7 483 aaKnown RBP21.35■■□□□ 1.01
LMNA-208ENST00000448611 PAG1Q9NWQ8 432 aa21.35■■□□□ 1.01
LMNA-208ENST00000448611 DDX60Q8IY21 1712 aaKnown RBP21.34■■□□□ 1.01
LMNA-208ENST00000448611 NECTIN1Q15223 517 aa21.34■■□□□ 1.01
LMNA-208ENST00000448611 TICAM2Q86XR7 235 aa21.34■■□□□ 1.01
LMNA-208ENST00000448611 VGLL2Q8N8G2 317 aa21.34■■□□□ 1.01
LMNA-208ENST00000448611 IFIT1P09914 478 aaKnown RBP21.33■■□□□ 1.01
LMNA-208ENST00000448611 CNNM1Q9NRU3 951 aa21.33■■□□□ 1.01
LMNA-208ENST00000448611 LAMB2P55268 1798 aa21.33■■□□□ 1.01
LMNA-208ENST00000448611 GOLIM4O00461 696 aa21.33■■□□□ 1
LMNA-208ENST00000448611 ATP2B3Q16720 1220 aa21.33■■□□□ 1
LMNA-208ENST00000448611 ZNF589Q86UQ0 364 aaPredicted RBP21.33■■□□□ 1
LMNA-208ENST00000448611 BCL11BQ9C0K0 894 aaPredicted RBP21.33■■□□□ 1
LMNA-208ENST00000448611 CCNL1Q9UK58 526 aaPredicted RBP21.33■■□□□ 1
LMNA-208ENST00000448611 RBM8AQ9Y5S9 174 aaKnown RBP21.33■■□□□ 1
LMNA-208ENST00000448611 SPEF2Q9C093 1822 aa21.33■■□□□ 1
LMNA-208ENST00000448611 SCN7AQ01118 1682 aa21.33■■□□□ 1
LMNA-208ENST00000448611 LY75O60449 1722 aa21.33■■□□□ 1
LMNA-208ENST00000448611 RPS6KA4O75676 772 aa21.32■■□□□ 1
LMNA-208ENST00000448611 CCDC158Q5M9N0 1113 aa21.32■■□□□ 1
LMNA-208ENST00000448611 PRPF40BQ6NWY9 871 aaKnown RBP21.32■■□□□ 1
LMNA-208ENST00000448611 HSP90B1P14625 803 aaKnown RBP21.31■■□□□ 1
LMNA-208ENST00000448611 RAB3GAP1Q15042 981 aa21.31■■□□□ 1
LMNA-208ENST00000448611 TMX3Q96JJ7 454 aa21.31■■□□□ 1
LMNA-208ENST00000448611 RTL9Q8NET4 1388 aa21.31■■□□□ 1
LMNA-208ENST00000448611 ABCC12Q96J65 1359 aa21.31■■□□□ 1
LMNA-208ENST00000448611 TAF5LO75529 589 aa21.31■■□□□ 1
LMNA-208ENST00000448611 CHGBP05060 677 aa21.31■■□□□ 1
LMNA-208ENST00000448611 PDE8BO95263 885 aa21.3■■□□□ 1
LMNA-208ENST00000448611 GORABQ5T7V8 394 aa21.3■■□□□ 1
LMNA-208ENST00000448611 TTC14Q96N46 770 aa21.3■■□□□ 1
LMNA-208ENST00000448611 BCL2L12Q9HB09 334 aa21.3■■□□□ 1
LMNA-208ENST00000448611 MCMDC2Q4G0Z9 681 aa21.29■■□□□ 1
LMNA-208ENST00000448611 TTC39AQ5SRH9 613 aa21.29■■□□□ 1
LMNA-208ENST00000448611 CREB3L3Q68CJ9 461 aa21.29■■□□□ 1
LMNA-208ENST00000448611 SMIM5Q71RC9 77 aa21.29■■□□□ 1
LMNA-208ENST00000448611 NARFQ9UHQ1 456 aa21.29■■□□□ 1
LMNA-208ENST00000448611 CUL4AQ13619 759 aa21.29■■□□□ 1
LMNA-208ENST00000448611 CCDC152Q4G0S7 254 aa21.29■■□□□ 1
LMNA-208ENST00000448611 TM6SF1Q9BZW5 370 aa21.29■■□□□ 1
LMNA-208ENST00000448611 CWC22Q9HCG8 908 aaKnown RBP21.29■■□□□ 1
LMNA-208ENST00000448611 MROH5Q6ZUA9 1318 aa21.29■■□□□ 1
LMNA-208ENST00000448611 ADCK5Q3MIX3 580 aa21.28■■□□□ 1
LMNA-208ENST00000448611 SEC62Q99442 399 aaKnown RBP21.28■■□□□ 1
LMNA-208ENST00000448611 SEC31BQ9NQW1 1179 aa21.28■■□□□ 1
LMNA-208ENST00000448611 TAF1LQ8IZX4 1826 aa21.28■■□□□ 1
LMNA-208ENST00000448611 GNPATO15228 680 aa21.27■■□□□ 1
LMNA-208ENST00000448611 ZGPATQ8N5A5 531 aaKnown RBP21.27■■□□□ 1
LMNA-208ENST00000448611 TNPO1Q92973 898 aaKnown RBP21.27■■□□□ 1
LMNA-208ENST00000448611 SLC27A2O14975 620 aa21.27■■□□□ 1
LMNA-208ENST00000448611 ZKSCAN1P17029 563 aaPredicted RBP21.27■■□□□ 1
LMNA-208ENST00000448611 MCM4P33991 863 aa21.27■■□□□ 1
LMNA-208ENST00000448611 KCNJ4P48050 445 aa21.27■■□□□ 1
LMNA-208ENST00000448611 SCARF1Q14162 830 aa21.27■■□□□ 1
LMNA-208ENST00000448611 USPL1Q5W0Q7 1092 aa21.27■■□□□ 1
LMNA-208ENST00000448611 HELLSQ9NRZ9 838 aa21.27■■□□□ 1
LMNA-208ENST00000448611 ZMYM1Q5SVZ6 1142 aa21.26■□□□□ 0.99
LMNA-208ENST00000448611 TBC1D9BQ66K14 1250 aa21.26■□□□□ 0.99
LMNA-208ENST00000448611 ZNF512BQ96KM6 892 aaPredicted RBP21.26■□□□□ 0.99
LMNA-208ENST00000448611 JAKMIP1Q96N16 626 aaKnown RBP21.26■□□□□ 0.99
LMNA-208ENST00000448611 ZSWIM6Q9HCJ5 1215 aa21.26■□□□□ 0.99
LMNA-208ENST00000448611 CASTP20810 708 aaKnown RBP21.25■□□□□ 0.99
LMNA-208ENST00000448611 FGFR2P21802 821 aa21.25■□□□□ 0.99
LMNA-208ENST00000448611 FKBP4Q02790 459 aaKnown RBP eCLIP21.25■□□□□ 0.99
LMNA-208ENST00000448611 PUM3Q15397 648 aaKnown RBP21.25■□□□□ 0.99
LMNA-208ENST00000448611 ERFEQ4G0M1 354 aa21.25■□□□□ 0.99
LMNA-208ENST00000448611 CCDC129Q6ZRS4 1044 aa21.25■□□□□ 0.99
LMNA-208ENST00000448611 AMIGO3Q86WK7 504 aa21.25■□□□□ 0.99
LMNA-208ENST00000448611 RTCBQ9Y3I0 505 aaKnown RBP21.25■□□□□ 0.99
LMNA-208ENST00000448611 RPAP1Q9BWH6 1393 aaPredicted RBP21.25■□□□□ 0.99
LMNA-208ENST00000448611 RNF20Q5VTR2 975 aa21.25■□□□□ 0.99
LMNA-208ENST00000448611 MPHOSPH8Q99549 860 aa21.25■□□□□ 0.99
LMNA-208ENST00000448611 SRP68Q9UHB9 627 aaKnown RBP21.25■□□□□ 0.99
LMNA-208ENST00000448611 C4BP0C0L5 1744 aa21.24■□□□□ 0.99
LMNA-208ENST00000448611 RNF113AO15541 343 aaKnown RBP21.24■□□□□ 0.99
LMNA-208ENST00000448611 APBA3O96018 575 aa21.24■□□□□ 0.99
LMNA-208ENST00000448611 SSFA2P28290 1259 aa21.24■□□□□ 0.99
LMNA-208ENST00000448611 AK2P54819 239 aa21.24■□□□□ 0.99
LMNA-208ENST00000448611 SLFNL1Q499Z3 407 aa21.24■□□□□ 0.99
LMNA-208ENST00000448611 NOL8Q76FK4 1167 aaKnown RBP21.24■□□□□ 0.99
LMNA-208ENST00000448611 INTS4Q96HW7 963 aaKnown RBP21.24■□□□□ 0.99
LMNA-208ENST00000448611 HMG20BQ9P0W2 317 aa21.24■□□□□ 0.99
LMNA-208ENST00000448611 ARAP2Q8WZ64 1704 aa21.24■□□□□ 0.99
LMNA-208ENST00000448611 CPA1P15085 419 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 ZAP70P43403 619 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 TSGA10IPQ3SY00 556 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 BICDL1Q6ZP65 573 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 LPIN2Q92539 896 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 ZPR1O75312 459 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 CYP2E1P05181 493 aaPredicted RBP21.23■□□□□ 0.99
LMNA-208ENST00000448611 IGHMBP2P38935 993 aaKnown RBP21.23■□□□□ 0.99
LMNA-208ENST00000448611 MCAMP43121 646 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 SF3B3Q15393 1217 aaKnown RBP21.23■□□□□ 0.99
LMNA-208ENST00000448611 VPS53Q5VIR6 699 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 HELBQ8NG08 1087 aaPredicted RBP21.23■□□□□ 0.99
LMNA-208ENST00000448611 ARHGEF1Q92888 912 aaKnown RBP21.23■□□□□ 0.99
LMNA-208ENST00000448611 COL24A1Q17RW2 1714 aa21.23■□□□□ 0.99
LMNA-208ENST00000448611 NUCB2P80303 420 aa21.22■□□□□ 0.99
LMNA-208ENST00000448611 SLC10A5Q5PT55 438 aa21.22■□□□□ 0.99
LMNA-208ENST00000448611 PI16Q6UXB8 463 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms