RNA–Protein interactions for RNA: ENST00000447578.6

VPS29-202, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 996 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-202ENST00000447578 NRLP54845 237 aa7.87□□□□□ -1.15
VPS29-202ENST00000447578 FAM26DQ5JW98 314 aa7.87□□□□□ -1.15
VPS29-202ENST00000447578 CAPN12Q6ZSI9 719 aa7.87□□□□□ -1.15
VPS29-202ENST00000447578 ETFBKMTQ8IXQ9 262 aa7.87□□□□□ -1.15
VPS29-202ENST00000447578 ZMIZ1Q9ULJ6 1067 aa7.87□□□□□ -1.15
VPS29-202ENST00000447578 LOC102724428A0A0B4J2F2 783 aa7.86□□□□□ -1.15
VPS29-202ENST00000447578 SIK1P57059 783 aa7.86□□□□□ -1.15
VPS29-202ENST00000447578 PLD4Q96BZ4 506 aa7.86□□□□□ -1.15
VPS29-202ENST00000447578 ARID4AP29374 1257 aaPredicted RBP7.85□□□□□ -1.15
VPS29-202ENST00000447578 FAM69CQ0P6D2 419 aa7.85□□□□□ -1.15
VPS29-202ENST00000447578 OCLNQ16625 522 aa7.85□□□□□ -1.15
VPS29-202ENST00000447578 GDF6Q6KF10 455 aaPredicted RBP7.85□□□□□ -1.15
VPS29-202ENST00000447578 IGF2-ASQ6U949 168 aa7.85□□□□□ -1.15
VPS29-202ENST00000447578 STK32AQ8WU08 396 aa7.85□□□□□ -1.15
VPS29-202ENST00000447578 MEGF10Q96KG7 1140 aa7.85□□□□□ -1.15
VPS29-202ENST00000447578 ACIN1Q9UKV3 1341 aaKnown RBP7.84□□□□□ -1.15
VPS29-202ENST00000447578 PSAPP07602 524 aa7.84□□□□□ -1.15
VPS29-202ENST00000447578 TRIP4Q15650 581 aaPredicted RBP7.84□□□□□ -1.15
VPS29-202ENST00000447578 MKNK1Q9BUB5 465 aa7.84□□□□□ -1.15
VPS29-202ENST00000447578 DLL1O00548 723 aa7.83□□□□□ -1.16
VPS29-202ENST00000447578 ALX3O95076 343 aa7.83□□□□□ -1.16
VPS29-202ENST00000447578 SWI5Q1ZZU3 235 aa7.83□□□□□ -1.16
VPS29-202ENST00000447578 IL22RA1Q8N6P7 574 aa7.83□□□□□ -1.16
VPS29-202ENST00000447578 GHRHP01286 108 aa7.82□□□□□ -1.16
VPS29-202ENST00000447578 NAA30Q147X3 362 aaPredicted RBP7.82□□□□□ -1.16
VPS29-202ENST00000447578 C16orf46Q6P387 395 aa7.82□□□□□ -1.16
VPS29-202ENST00000447578 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.81□□□□□ -1.16
VPS29-202ENST00000447578 BRD2P25440 801 aaKnown RBP7.81□□□□□ -1.16
VPS29-202ENST00000447578 NLRP13Q86W25 1043 aa7.81□□□□□ -1.16
VPS29-202ENST00000447578 HOMEZQ8IX15 550 aa7.81□□□□□ -1.16
VPS29-202ENST00000447578 TRIM33Q9UPN9 1127 aa7.81□□□□□ -1.16
VPS29-202ENST00000447578 TNFRSF10BO14763 440 aa7.8□□□□□ -1.16
VPS29-202ENST00000447578 SRPK2P78362 688 aaKnown RBP7.8□□□□□ -1.16
VPS29-202ENST00000447578 ELOAQ14241 798 aaKnown RBP7.8□□□□□ -1.16
VPS29-202ENST00000447578 COL13A1Q5TAT6 717 aaPredicted RBP7.8□□□□□ -1.16
VPS29-202ENST00000447578 RNF112Q9ULX5 631 aa7.8□□□□□ -1.16
VPS29-202ENST00000447578 UBAP1LF5GYI3 381 aa7.79□□□□□ -1.16
VPS29-202ENST00000447578 SOX18P35713 384 aa7.79□□□□□ -1.16
VPS29-202ENST00000447578 IRAK1P51617 712 aa7.79□□□□□ -1.16
VPS29-202ENST00000447578 SETDB1Q15047 1291 aa7.79□□□□□ -1.16
VPS29-202ENST00000447578 AKTIPQ9H8T0 292 aa7.79□□□□□ -1.16
VPS29-202ENST00000447578 CXXC1Q9P0U4 656 aaPredicted RBP7.79□□□□□ -1.16
VPS29-202ENST00000447578 RNF114Q9Y508 228 aa7.79□□□□□ -1.16
VPS29-202ENST00000447578 ZBTB39O15060 712 aa7.78□□□□□ -1.16
VPS29-202ENST00000447578 HOXD8P13378 290 aaPredicted RBP7.78□□□□□ -1.16
VPS29-202ENST00000447578 TMEM164Q5U3C3 297 aa7.78□□□□□ -1.16
VPS29-202ENST00000447578 AGGF1Q8N302 714 aaeCLIP7.78□□□□□ -1.16
VPS29-202ENST00000447578 KRTAP4-11Q9BYQ6 195 aa7.78□□□□□ -1.16
VPS29-202ENST00000447578 RBSNQ9H1K0 784 aa7.78□□□□□ -1.16
VPS29-202ENST00000447578 F8W735 103 aaPredicted RBP7.77□□□□□ -1.17
VPS29-202ENST00000447578 SUPT5HO00267 1087 aaKnown RBP7.77□□□□□ -1.17
VPS29-202ENST00000447578 ATP11AP98196 1134 aa7.77□□□□□ -1.17
VPS29-202ENST00000447578 PRR23CQ6ZRP0 262 aa7.77□□□□□ -1.17
VPS29-202ENST00000447578 DZIP1LQ8IYY4 767 aaKnown RBP7.77□□□□□ -1.17
VPS29-202ENST00000447578 GPR152Q8TDT2 470 aa7.77□□□□□ -1.17
VPS29-202ENST00000447578 PIK3R5Q8WYR1 880 aa7.77□□□□□ -1.17
VPS29-202ENST00000447578 MRPL18Q9H0U6 180 aaKnown RBP7.77□□□□□ -1.17
VPS29-202ENST00000447578 ZAP70P43403 619 aa7.76□□□□□ -1.17
VPS29-202ENST00000447578 TXNDC11Q6PKC3 985 aa7.76□□□□□ -1.17
VPS29-202ENST00000447578 ADAMTSL4Q6UY14 1074 aa7.76□□□□□ -1.17
VPS29-202ENST00000447578 TMEM130Q8N3G9 435 aa7.76□□□□□ -1.17
VPS29-202ENST00000447578 OR13H1Q8NG92 308 aa7.76□□□□□ -1.17
VPS29-202ENST00000447578 COL26A1Q96A83 441 aa7.76□□□□□ -1.17
VPS29-202ENST00000447578 LACRTQ9GZZ8 138 aa7.76□□□□□ -1.17
VPS29-202ENST00000447578 LINC01387J3KSC0 135 aa7.75□□□□□ -1.17
VPS29-202ENST00000447578 CDC25BP30305 580 aa7.75□□□□□ -1.17
VPS29-202ENST00000447578 GALNT11Q8NCW6 608 aa7.75□□□□□ -1.17
VPS29-202ENST00000447578 SLAIN2Q9P270 581 aa7.75□□□□□ -1.17
VPS29-202ENST00000447578 PPME1Q9Y570 386 aa7.75□□□□□ -1.17
VPS29-202ENST00000447578 ATG7O95352 703 aa7.74□□□□□ -1.17
VPS29-202ENST00000447578 CYP2E1P05181 493 aaPredicted RBP7.74□□□□□ -1.17
VPS29-202ENST00000447578 CEP135Q66GS9 1140 aa7.74□□□□□ -1.17
VPS29-202ENST00000447578 PCMTD2Q9NV79 361 aa7.74□□□□□ -1.17
VPS29-202ENST00000447578 TAL1P17542 331 aaPredicted RBP7.73□□□□□ -1.17
VPS29-202ENST00000447578 SCNN1AP37088 669 aa7.73□□□□□ -1.17
VPS29-202ENST00000447578 HYAL2Q12891 473 aa7.73□□□□□ -1.17
VPS29-202ENST00000447578 TTC39BQ5VTQ0 682 aaPredicted RBP7.73□□□□□ -1.17
VPS29-202ENST00000447578 RASSF4Q9H2L5 321 aa7.73□□□□□ -1.17
VPS29-202ENST00000447578 KCNK4Q9NYG8 393 aa7.73□□□□□ -1.17
VPS29-202ENST00000447578 STIM2Q9P246 746 aa7.73□□□□□ -1.17
VPS29-202ENST00000447578 PTCD1O75127 700 aaKnown RBP7.72□□□□□ -1.17
VPS29-202ENST00000447578 WISP1O95388 367 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 GLB1P16278 677 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 FSTP19883 344 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 MAP4K3Q8IVH8 894 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 SPACA7Q96KW9 195 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 UBL7Q96S82 380 aaPredicted RBP7.72□□□□□ -1.17
VPS29-202ENST00000447578 KRTAP17-1Q9BYP8 105 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 KRTAP4-5Q9BYR2 181 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 SRA1Q9HD15 236 aaKnown RBP7.72□□□□□ -1.17
VPS29-202ENST00000447578 FAM13BQ9NYF5 915 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 SEPT3Q9UH03 358 aa7.72□□□□□ -1.17
VPS29-202ENST00000447578 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.72□□□□□ -1.17
VPS29-202ENST00000447578 ATCAYQ86WG3 371 aa7.71□□□□□ -1.18
VPS29-202ENST00000447578 CLP1Q92989 425 aaKnown RBP7.71□□□□□ -1.18
VPS29-202ENST00000447578 CARD10Q9BWT7 1032 aa7.71□□□□□ -1.18
VPS29-202ENST00000447578 MUC3BQ9H195 1237 aa7.71□□□□□ -1.18
VPS29-202ENST00000447578 SH2B1Q9NRF2 756 aaPredicted RBP7.71□□□□□ -1.18
VPS29-202ENST00000447578 ABI2Q9NYB9 513 aaPredicted RBP7.71□□□□□ -1.18
VPS29-202ENST00000447578 FNDC3AQ9Y2H6 1198 aaKnown RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms