RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 COPS6Q7L5N1 327 aa18.38■□□□□ 0.53
LINC00642-202ENST00000442515 EYA3Q99504 573 aa18.38■□□□□ 0.53
LINC00642-202ENST00000442515 TSPYL4Q9UJ04 414 aa18.38■□□□□ 0.53
LINC00642-202ENST00000442515 AKAP11Q9UKA4 1901 aa18.38■□□□□ 0.53
LINC00642-202ENST00000442515 VIL1P09327 827 aaKnown RBP18.37■□□□□ 0.53
LINC00642-202ENST00000442515 AIMP1Q12904 312 aaKnown RBP18.37■□□□□ 0.53
LINC00642-202ENST00000442515 XAGE3Q8WTP9 111 aa18.37■□□□□ 0.53
LINC00642-202ENST00000442515 PAPPA2Q9BXP8 1791 aa18.37■□□□□ 0.53
LINC00642-202ENST00000442515 GPR25O00155 361 aa18.36■□□□□ 0.53
LINC00642-202ENST00000442515 ZNF280AP59817 542 aaPredicted RBP18.36■□□□□ 0.53
LINC00642-202ENST00000442515 SCARF1Q14162 830 aa18.36■□□□□ 0.53
LINC00642-202ENST00000442515 NFE2L2Q16236 605 aa18.36■□□□□ 0.53
LINC00642-202ENST00000442515 MOB2Q70IA6 237 aa18.36■□□□□ 0.53
LINC00642-202ENST00000442515 TBC1D16Q8TBP0 767 aa18.36■□□□□ 0.53
LINC00642-202ENST00000442515 COL4A1P02462 1669 aa18.35■□□□□ 0.53
LINC00642-202ENST00000442515 NOM1Q5C9Z4 860 aaKnown RBP18.35■□□□□ 0.53
LINC00642-202ENST00000442515 PLEKHF1Q96S99 279 aa18.35■□□□□ 0.53
LINC00642-202ENST00000442515 ZNF609O15014 1411 aa18.34■□□□□ 0.53
LINC00642-202ENST00000442515 SF3B3Q15393 1217 aaKnown RBP18.34■□□□□ 0.53
LINC00642-202ENST00000442515 NECTIN2Q92692 538 aa18.34■□□□□ 0.53
LINC00642-202ENST00000442515 PITPNM2Q9BZ72 1349 aa18.33■□□□□ 0.53
LINC00642-202ENST00000442515 UBE2Q2LH0YL09 131 aa18.33■□□□□ 0.52
LINC00642-202ENST00000442515 RSBN1LQ6PCB5 846 aaPredicted RBP18.33■□□□□ 0.52
LINC00642-202ENST00000442515 SCAF8Q9UPN6 1271 aaKnown RBP18.33■□□□□ 0.52
LINC00642-202ENST00000442515 TAF1P21675 1872 aa18.33■□□□□ 0.52
LINC00642-202ENST00000442515 TM4SF4P48230 202 aa18.32■□□□□ 0.52
LINC00642-202ENST00000442515 MKRN3Q13064 507 aaKnown RBP18.32■□□□□ 0.52
LINC00642-202ENST00000442515 AGBL3Q8NEM8 1001 aa18.32■□□□□ 0.52
LINC00642-202ENST00000442515 FAM89AQ96GI7 184 aa18.32■□□□□ 0.52
LINC00642-202ENST00000442515 ZC3H12CQ9C0D7 883 aaKnown RBP18.32■□□□□ 0.52
LINC00642-202ENST00000442515 DDX60Q8IY21 1712 aaKnown RBP18.32■□□□□ 0.52
LINC00642-202ENST00000442515 POLR2AP24928 1970 aaKnown RBP18.31■□□□□ 0.52
LINC00642-202ENST00000442515 UFL1O94874 794 aa18.31■□□□□ 0.52
LINC00642-202ENST00000442515 MYOZ2Q9NPC6 264 aa18.31■□□□□ 0.52
LINC00642-202ENST00000442515 SCN9AQ15858 1988 aa18.3■□□□□ 0.52
LINC00642-202ENST00000442515 SZT2Q5T011 3432 aa18.3■□□□□ 0.52
LINC00642-202ENST00000442515 FKTNO75072 461 aa18.3■□□□□ 0.52
LINC00642-202ENST00000442515 PRAMEF18Q5VWM3 479 aa18.3■□□□□ 0.52
LINC00642-202ENST00000442515 R3HDMLQ9H3Y0 253 aa18.3■□□□□ 0.52
LINC00642-202ENST00000442515 PODXL2Q9NZ53 605 aa18.3■□□□□ 0.52
LINC00642-202ENST00000442515 DLG5Q8TDM6 1919 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 MAPK8IP3Q9UPT6 1336 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 G3V3G9 751 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 USP17L8P0C7I0 530 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 RPS8P62241 208 aaKnown RBP18.29■□□□□ 0.52
LINC00642-202ENST00000442515 SREBF2Q12772 1141 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 TTLL12Q14166 644 aaPredicted RBP18.29■□□□□ 0.52
LINC00642-202ENST00000442515 DCAF8Q5TAQ9 597 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 CCER1Q8TC90 406 aaPredicted RBP18.29■□□□□ 0.52
LINC00642-202ENST00000442515 GMLQ99445 158 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 CFHR5Q9BXR6 569 aa18.29■□□□□ 0.52
LINC00642-202ENST00000442515 POTEFA5A3E0 1075 aa18.28■□□□□ 0.52
LINC00642-202ENST00000442515 FXR1P51114 621 aaKnown RBP eCLIP18.28■□□□□ 0.52
LINC00642-202ENST00000442515 RTL5Q5HYW3 569 aaPredicted RBP18.28■□□□□ 0.52
LINC00642-202ENST00000442515 ISCA1Q9BUE6 129 aa18.28■□□□□ 0.52
LINC00642-202ENST00000442515 GGA1Q9UJY5 639 aa18.28■□□□□ 0.52
LINC00642-202ENST00000442515 ATP5J2-PTCD1G3V325 749 aa18.27■□□□□ 0.52
LINC00642-202ENST00000442515 ANKIB1Q9P2G1 1089 aa18.27■□□□□ 0.52
LINC00642-202ENST00000442515 IRS4O14654 1257 aaPredicted RBP18.26■□□□□ 0.51
LINC00642-202ENST00000442515 PLBD2Q8NHP8 589 aa18.26■□□□□ 0.51
LINC00642-202ENST00000442515 BABAM1Q9NWV8 329 aa18.26■□□□□ 0.51
LINC00642-202ENST00000442515 TRIM17Q9Y577 477 aa18.26■□□□□ 0.51
LINC00642-202ENST00000442515 NBPF9Q3BBW0 867 aa18.25■□□□□ 0.51
LINC00642-202ENST00000442515 SEC31BQ9NQW1 1179 aa18.25■□□□□ 0.51
LINC00642-202ENST00000442515 CHPF2Q9P2E5 772 aa18.25■□□□□ 0.51
LINC00642-202ENST00000442515 KRT24Q2M2I5 525 aa18.24■□□□□ 0.51
LINC00642-202ENST00000442515 INTS3Q68E01 1043 aaKnown RBP18.24■□□□□ 0.51
LINC00642-202ENST00000442515 USP17L3A6NCW0 530 aa18.23■□□□□ 0.51
LINC00642-202ENST00000442515 USP17L4A6NCW7 530 aa18.23■□□□□ 0.51
LINC00642-202ENST00000442515 NF2P35240 595 aa18.23■□□□□ 0.51
LINC00642-202ENST00000442515 PTPN12Q05209 780 aaKnown RBP18.23■□□□□ 0.51
LINC00642-202ENST00000442515 ANKRD13DQ6ZTN6 518 aa18.23■□□□□ 0.51
LINC00642-202ENST00000442515 OTOP1Q7RTM1 612 aa18.23■□□□□ 0.51
LINC00642-202ENST00000442515 USP17L1Q7RTZ2 530 aa18.23■□□□□ 0.51
LINC00642-202ENST00000442515 PNNQ9H307 717 aaKnown RBP18.22■□□□□ 0.51
LINC00642-202ENST00000442515 WNT10BO00744 389 aa18.21■□□□□ 0.51
LINC00642-202ENST00000442515 ALDH1A1P00352 501 aa18.21■□□□□ 0.51
LINC00642-202ENST00000442515 RIPK4P57078 832 aa18.21■□□□□ 0.51
LINC00642-202ENST00000442515 PRKG1Q13976 671 aa18.21■□□□□ 0.51
LINC00642-202ENST00000442515 SPRYD7Q5W111 196 aa18.21■□□□□ 0.51
LINC00642-202ENST00000442515 ARMC9Q7Z3E5 817 aa18.21■□□□□ 0.51
LINC00642-202ENST00000442515 PODNQ7Z5L7 613 aa18.21■□□□□ 0.51
LINC00642-202ENST00000442515 TRIM28Q13263 835 aaKnown RBP18.2■□□□□ 0.5
LINC00642-202ENST00000442515 HDGFL1Q5TGJ6 251 aa18.2■□□□□ 0.5
LINC00642-202ENST00000442515 MXD3Q9BW11 206 aa18.2■□□□□ 0.5
LINC00642-202ENST00000442515 RANBP2P49792 3224 aaKnown RBP18.2■□□□□ 0.5
LINC00642-202ENST00000442515 XDHP47989 1333 aa18.2■□□□□ 0.5
LINC00642-202ENST00000442515 SASH1O94885 1247 aa18.19■□□□□ 0.5
LINC00642-202ENST00000442515 EN2P19622 333 aaPredicted RBP18.18■□□□□ 0.5
LINC00642-202ENST00000442515 CCDC152Q4G0S7 254 aa18.18■□□□□ 0.5
LINC00642-202ENST00000442515 DACT2Q5SW24 774 aa18.18■□□□□ 0.5
LINC00642-202ENST00000442515 LDLRAD1Q5T700 205 aa18.18■□□□□ 0.5
LINC00642-202ENST00000442515 IFNL1Q8IU54 200 aa18.18■□□□□ 0.5
LINC00642-202ENST00000442515 OGFOD1Q8N543 542 aa18.18■□□□□ 0.5
LINC00642-202ENST00000442515 ZBTB38Q8NAP3 1195 aaPredicted RBP18.18■□□□□ 0.5
LINC00642-202ENST00000442515 PTPN22Q9Y2R2 807 aa18.18■□□□□ 0.5
LINC00642-202ENST00000442515 MANSC4A6NHS7 340 aaPredicted RBP18.17■□□□□ 0.5
LINC00642-202ENST00000442515 ATP2B4P23634 1241 aa18.17■□□□□ 0.5
LINC00642-202ENST00000442515 LMOD3Q0VAK6 560 aa18.17■□□□□ 0.5
LINC00642-202ENST00000442515 ARMC5Q96C12 935 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms