RNA–Protein interactions for RNA: ENST00000432547.7

TTR-202, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 745 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-202ENST00000432547 ZDHHC3Q9NYG2 299 aa9.83□□□□□ -0.84
TTR-202ENST00000432547 NOP53Q9NZM5 478 aaKnown RBP9.83□□□□□ -0.84
TTR-202ENST00000432547 PARP3Q9Y6F1 533 aa9.83□□□□□ -0.84
TTR-202ENST00000432547 RPRD2Q5VT52 1461 aaKnown RBP9.83□□□□□ -0.84
TTR-202ENST00000432547 MED1Q15648 1581 aaPredicted RBP9.83□□□□□ -0.84
TTR-202ENST00000432547 PIK3R2O00459 728 aa9.82□□□□□ -0.84
TTR-202ENST00000432547 ABL2P42684 1182 aa9.82□□□□□ -0.84
TTR-202ENST00000432547 ZNF468Q5VIY5 522 aaPredicted RBP9.82□□□□□ -0.84
TTR-202ENST00000432547 ZDHHC1Q8WTX9 485 aa9.82□□□□□ -0.84
TTR-202ENST00000432547 NWD1Q149M9 1564 aa9.82□□□□□ -0.84
TTR-202ENST00000432547 ANKRD50Q9ULJ7 1429 aa9.82□□□□□ -0.84
TTR-202ENST00000432547 TMEM2Q9UHN6 1383 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 TOM1O60784 492 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 LTKP29376 864 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 TXLNAP40222 546 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 NBPF1Q3BBV0 1214 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 SAMD5Q5TGI4 173 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 ILDR2Q71H61 639 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 PRM3Q9NNZ6 103 aa9.81□□□□□ -0.84
TTR-202ENST00000432547 SPHKAPQ2M3C7 1700 aa9.8□□□□□ -0.84
TTR-202ENST00000432547 DOC2BQ14184 412 aa9.8□□□□□ -0.84
TTR-202ENST00000432547 C7orf43Q8WVR3 580 aa9.8□□□□□ -0.84
TTR-202ENST00000432547 CABP1Q9NZU7 370 aa9.8□□□□□ -0.84
TTR-202ENST00000432547 TATP17735 454 aaPredicted RBP9.79□□□□□ -0.84
TTR-202ENST00000432547 PLVAPQ9BX97 442 aa9.79□□□□□ -0.84
TTR-202ENST00000432547 WASHC4Q2M389 1173 aa9.78□□□□□ -0.84
TTR-202ENST00000432547 TXNDC2Q86VQ3 553 aa9.78□□□□□ -0.84
TTR-202ENST00000432547 MARK1Q9P0L2 795 aa9.78□□□□□ -0.84
TTR-202ENST00000432547 HSPA1LP34931 641 aa9.77□□□□□ -0.85
TTR-202ENST00000432547 EPHA4P54764 986 aa9.77□□□□□ -0.85
TTR-202ENST00000432547 IDI1Q13907 227 aa9.77□□□□□ -0.85
TTR-202ENST00000432547 COL9A3Q14050 684 aaPredicted RBP9.77□□□□□ -0.85
TTR-202ENST00000432547 FAM50AQ14320 339 aaKnown RBP9.77□□□□□ -0.85
TTR-202ENST00000432547 PODXL2Q9NZ53 605 aa9.77□□□□□ -0.85
TTR-202ENST00000432547 SCHIP1Q9P0W5 487 aaPredicted RBP9.77□□□□□ -0.85
TTR-202ENST00000432547 EID1Q9Y6B2 187 aa9.77□□□□□ -0.85
TTR-202ENST00000432547 ROBO1Q9Y6N7 1651 aa9.77□□□□□ -0.85
TTR-202ENST00000432547 ROCK1Q13464 1354 aa9.76□□□□□ -0.85
TTR-202ENST00000432547 ZFYVE9O95405 1425 aa9.76□□□□□ -0.85
TTR-202ENST00000432547 PIP4K2BP78356 416 aa9.76□□□□□ -0.85
TTR-202ENST00000432547 SEMA3FQ13275 785 aa9.76□□□□□ -0.85
TTR-202ENST00000432547 SEMA6BQ9H3T3 888 aa9.76□□□□□ -0.85
TTR-202ENST00000432547 PRR12Q9ULL5 1215 aa9.76□□□□□ -0.85
TTR-202ENST00000432547 KIF1BO60333 1816 aa9.76□□□□□ -0.85
TTR-202ENST00000432547 NKTRP30414 1462 aaKnown RBP9.76□□□□□ -0.85
TTR-202ENST00000432547 ELOA3CA0A087WX78 387 aaPredicted RBP9.75□□□□□ -0.85
TTR-202ENST00000432547 ELOA3DA6NLF2 546 aaPredicted RBP9.75□□□□□ -0.85
TTR-202ENST00000432547 LAMC2Q13753 1193 aa9.75□□□□□ -0.85
TTR-202ENST00000432547 ELOA3BQ3SY89 546 aa9.75□□□□□ -0.85
TTR-202ENST00000432547 SYT9Q86SS6 491 aa9.75□□□□□ -0.85
TTR-202ENST00000432547 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.75□□□□□ -0.85
TTR-202ENST00000432547 ELOA3Q8NG57 546 aa9.75□□□□□ -0.85
TTR-202ENST00000432547 ZNF358Q9NW07 568 aa9.75□□□□□ -0.85
TTR-202ENST00000432547 SLC52A1Q9NWF4 448 aa9.75□□□□□ -0.85
TTR-202ENST00000432547 EML1O00423 815 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 SOX11P35716 441 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 MCM6Q14566 821 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 SH3PXD2AQ5TCZ1 1133 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 BICDL1Q6ZP65 573 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 L3MBTL2Q969R5 705 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 GJA3Q9Y6H8 435 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 DIP2AQ14689 1571 aa9.74□□□□□ -0.85
TTR-202ENST00000432547 SPATA31C1P0DKV0 1188 aa9.73□□□□□ -0.85
TTR-202ENST00000432547 GTF2IP78347 998 aa9.73□□□□□ -0.85
TTR-202ENST00000432547 TEAD4Q15561 434 aa9.73□□□□□ -0.85
TTR-202ENST00000432547 STARD13Q9Y3M8 1113 aa9.73□□□□□ -0.85
TTR-202ENST00000432547 NRXN3Q9Y4C0 1643 aa9.73□□□□□ -0.85
TTR-202ENST00000432547 GATA4P43694 442 aa9.72□□□□□ -0.85
TTR-202ENST00000432547 SFSWAPQ12872 951 aaKnown RBP9.72□□□□□ -0.85
TTR-202ENST00000432547 RSPO4Q2I0M5 234 aaPredicted RBP9.72□□□□□ -0.85
TTR-202ENST00000432547 FOXD4L6Q3SYB3 417 aaPredicted RBP9.72□□□□□ -0.85
TTR-202ENST00000432547 TBCELQ5QJ74 424 aa9.72□□□□□ -0.85
TTR-202ENST00000432547 FOXD4L3Q6VB84 417 aaPredicted RBP9.72□□□□□ -0.85
TTR-202ENST00000432547 LRRC69Q6ZNQ3 347 aa9.72□□□□□ -0.85
TTR-202ENST00000432547 SLC30A3Q99726 388 aa9.72□□□□□ -0.85
TTR-202ENST00000432547 ALG2Q9H553 416 aa9.72□□□□□ -0.85
TTR-202ENST00000432547 PHLPP1O60346 1717 aa9.72□□□□□ -0.85
TTR-202ENST00000432547 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.72□□□□□ -0.85
TTR-202ENST00000432547 PLEKHG1Q9ULL1 1385 aa9.72□□□□□ -0.85
TTR-202ENST00000432547 BACH1O14867 736 aa9.71□□□□□ -0.86
TTR-202ENST00000432547 SKIP12755 728 aa9.71□□□□□ -0.86
TTR-202ENST00000432547 NOS2P35228 1153 aa9.71□□□□□ -0.86
TTR-202ENST00000432547 EML3Q32P44 896 aa9.71□□□□□ -0.86
TTR-202ENST00000432547 RIMS2Q9UQ26 1411 aa9.71□□□□□ -0.86
TTR-202ENST00000432547 ADARB2-AS1A8MUL3 147 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 SIN3BO75182 1162 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 KCNA6P17658 529 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 NCOA4Q13772 614 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 NKAPLQ5M9Q1 402 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 SLC9A9Q8IVB4 645 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 TNS4Q8IZW8 715 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 SLC26A8Q96RN1 970 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 NOD1Q9Y239 953 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 COG6Q9Y2V7 657 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 TMEM94Q12767 1356 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 FAM135BQ49AJ0 1406 aa9.7□□□□□ -0.86
TTR-202ENST00000432547 XRN1Q8IZH2 1706 aaKnown RBP9.7□□□□□ -0.86
TTR-202ENST00000432547 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.69□□□□□ -0.86
TTR-202ENST00000432547 CLTCL1P53675 1640 aa9.69□□□□□ -0.86
TTR-202ENST00000432547 C8orf86Q6ZUL3 223 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms