RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 GOLGA8AA7E2F4 631 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 STX1AQ16623 288 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 ERCC4Q92889 916 aaPredicted RBP13.39□□□□□ -0.27
PTCH1-208ENST00000430669 LTN1O94822 1766 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 PLCG2P16885 1265 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 CHMLP26374 656 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 ESR2Q92731 530 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 RTCBQ9Y3I0 505 aaKnown RBP13.39□□□□□ -0.27
PTCH1-208ENST00000430669 MON2Q7Z3U7 1717 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 TNIP1Q15025 636 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 CABLES1Q8TDN4 633 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 RUFY3Q7L099 469 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 UBAP1LF5GYI3 381 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 ANXA1P04083 346 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 RDXP35241 583 aaKnown RBP13.39□□□□□ -0.27
PTCH1-208ENST00000430669 TMEM266Q2M3C6 531 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 KCNG4Q8TDN1 519 aa13.39□□□□□ -0.27
PTCH1-208ENST00000430669 NIP7Q9Y221 180 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTCH1-208ENST00000430669 RANBP6O60518 1105 aaKnown RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 HLA-DOAP06340 250 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 USP26Q9BXU7 913 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 EIF4A1P60842 406 aaKnown RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 MPHOSPH10O00566 681 aaKnown RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 NEMFO60524 1076 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 TPTE2Q6XPS3 522 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 CRACR2BQ8N4Y2 399 aaPredicted RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 USP19O94966 1318 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 IARSP41252 1262 aaKnown RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 RNF113AO15541 343 aaKnown RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 NAP1L1P55209 391 aaKnown RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 ZNF397Q8NF99 534 aaPredicted RBP13.38□□□□□ -0.27
PTCH1-208ENST00000430669 CALM1P0DP23 149 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 CALM2P0DP24 149 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 CALM3P0DP25 149 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 TRAF1Q13077 416 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 TSHZ3Q63HK5 1081 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 C3P01024 1663 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 CPS1P31327 1500 aa13.38□□□□□ -0.27
PTCH1-208ENST00000430669 GNAQP50148 359 aa13.37□□□□□ -0.27
PTCH1-208ENST00000430669 MROH1Q8NDA8 1641 aa13.37□□□□□ -0.27
PTCH1-208ENST00000430669 R3HCC1Q9Y3T6 440 aaKnown RBP13.37□□□□□ -0.27
PTCH1-208ENST00000430669 WTAPQ15007 396 aa13.37□□□□□ -0.27
PTCH1-208ENST00000430669 PUM3Q15397 648 aaKnown RBP13.37□□□□□ -0.27
PTCH1-208ENST00000430669 IRS4O14654 1257 aaPredicted RBP13.37□□□□□ -0.27
PTCH1-208ENST00000430669 RAB3GAP1Q15042 981 aa13.37□□□□□ -0.27
PTCH1-208ENST00000430669 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
PTCH1-208ENST00000430669 KAT14Q9H8E8 782 aa13.37□□□□□ -0.27
PTCH1-208ENST00000430669 CWF19L2Q2TBE0 894 aaKnown RBP13.37□□□□□ -0.27
PTCH1-208ENST00000430669 MROH5Q6ZUA9 1318 aa13.37□□□□□ -0.27
PTCH1-208ENST00000430669 DCAF8L1A6NGE4 600 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 RUFY1Q96T51 708 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 NMIQ13287 307 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-208ENST00000430669 SKAP1Q86WV1 359 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 LLPHQ9BRT6 129 aaKnown RBP13.36□□□□□ -0.27
PTCH1-208ENST00000430669 CREB3L3Q68CJ9 461 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 SYCP1Q15431 976 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 ADGRB1O14514 1584 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 ZBTB43O43298 467 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 WWC2Q6AWC2 1192 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 SPC24Q8NBT2 197 aa13.36□□□□□ -0.27
PTCH1-208ENST00000430669 CDR1P51861 262 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 C8orf37Q96NL8 207 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 USP16Q9Y5T5 823 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 CT47A1Q5JQC4 288 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-208ENST00000430669 IFIT1BQ5T764 474 aaKnown RBP13.35□□□□□ -0.27
PTCH1-208ENST00000430669 PPP1R12BO60237 982 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-208ENST00000430669 AMPD3Q01432 767 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 KIF13AQ9H1H9 1805 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 GSDMDP57764 484 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 TFCP2Q12800 502 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 CUL5Q93034 780 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 PDE8AO60658 829 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 ZSCAN30Q86W11 494 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 CAGE1Q8TC20 777 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 TMEM94Q12767 1356 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 IBTKQ9P2D0 1353 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-208ENST00000430669 KDM4AO75164 1064 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 KIF20AO95235 890 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 ZNF76P36508 570 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 LRRC27Q9C0I9 530 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 PHKG2P15735 406 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 KRT24Q2M2I5 525 aa13.35□□□□□ -0.27
PTCH1-208ENST00000430669 ODF2Q5BJF6 829 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 PNPLA6Q8IY17 1366 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 CCDC148Q8NFR7 591 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 FBXO3Q9UK99 471 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 MAGEB6P1A0A0J9YX57 407 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 TSPY2A6NKD2 308 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 CCT2P78371 535 aaKnown RBP13.34□□□□□ -0.27
PTCH1-208ENST00000430669 TNNI3KQ59H18 835 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 RBM28Q9NW13 759 aaKnown RBP13.34□□□□□ -0.27
PTCH1-208ENST00000430669 FPGT-TNNI3KV9GXZ4 949 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 GIGYF1O75420 1035 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-208ENST00000430669 NAA16Q6N069 864 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-208ENST00000430669 Q6ZUG5 572 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 SIGLEC1Q9BZZ2 1709 aa13.34□□□□□ -0.27
PTCH1-208ENST00000430669 CCDC194A0A1B0GVG4 234 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms