RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 CCDC158Q5M9N0 1113 aa17.27■□□□□ 0.36
CALD1-207ENST00000430085 EDC3Q96F86 508 aaKnown RBP17.27■□□□□ 0.36
CALD1-207ENST00000430085 DDX60Q8IY21 1712 aaKnown RBP17.27■□□□□ 0.36
CALD1-207ENST00000430085 LAMB2P55268 1798 aa17.27■□□□□ 0.36
CALD1-207ENST00000430085 RIC1Q4ADV7 1423 aa17.27■□□□□ 0.36
CALD1-207ENST00000430085 HSP90AA1P07900 732 aaKnown RBP17.27■□□□□ 0.35
CALD1-207ENST00000430085 HSPA4P34932 840 aa17.27■□□□□ 0.35
CALD1-207ENST00000430085 USPL1Q5W0Q7 1092 aa17.27■□□□□ 0.35
CALD1-207ENST00000430085 FAM227BQ96M60 508 aa17.27■□□□□ 0.35
CALD1-207ENST00000430085 RFX7Q2KHR2 1363 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 IFIT1P09914 478 aaKnown RBP17.26■□□□□ 0.35
CALD1-207ENST00000430085 ATP2B3Q16720 1220 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 SMIM5Q71RC9 77 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 XAGE2Q96GT9 111 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 ANTXR1Q9H6X2 564 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 NDUFB9Q9Y6M9 179 aa17.26■□□□□ 0.35
CALD1-207ENST00000430085 TTC39AQ5SRH9 613 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.25■□□□□ 0.35
CALD1-207ENST00000430085 MPHOSPH8Q99549 860 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 ANO8Q9HCE9 1232 aaPredicted RBP17.25■□□□□ 0.35
CALD1-207ENST00000430085 PAG1Q9NWQ8 432 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 GTF2E1P29083 439 aaPredicted RBP17.25■□□□□ 0.35
CALD1-207ENST00000430085 ZNF827Q17R98 1081 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 TBC1D9BQ66K14 1250 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 DDX46Q7L014 1031 aaKnown RBP17.25■□□□□ 0.35
CALD1-207ENST00000430085 SETDB2Q96T68 719 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 SRP68Q9UHB9 627 aaKnown RBP17.25■□□□□ 0.35
CALD1-207ENST00000430085 MROH5Q6ZUA9 1318 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 RTL9Q8NET4 1388 aa17.25■□□□□ 0.35
CALD1-207ENST00000430085 LRP5O75197 1615 aa17.24■□□□□ 0.35
CALD1-207ENST00000430085 A0A0D9SFI3 127 aa17.24■□□□□ 0.35
CALD1-207ENST00000430085 GOLIM4O00461 696 aa17.24■□□□□ 0.35
CALD1-207ENST00000430085 ADORA1P30542 326 aa17.24■□□□□ 0.35
CALD1-207ENST00000430085 KBTBD3Q8NAB2 608 aa17.24■□□□□ 0.35
CALD1-207ENST00000430085 NYXQ9GZU5 481 aa17.24■□□□□ 0.35
CALD1-207ENST00000430085 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
CALD1-207ENST00000430085 PDE8BO95263 885 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 RFC4P35249 363 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
CALD1-207ENST00000430085 NEK4P51957 841 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 ERFEQ4G0M1 354 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 TRAPPC3LQ5T215 181 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 ARHGEF1Q92888 912 aaKnown RBP17.23■□□□□ 0.35
CALD1-207ENST00000430085 IL17RAQ96F46 866 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 UBR3Q6ZT12 1888 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 PHF14O94880 888 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 CCDC171Q6TFL3 1326 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 VGLL2Q8N8G2 317 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 AKT1S1Q96B36 256 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 ABCC12Q96J65 1359 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 SEC31BQ9NQW1 1179 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 SNRKQ9NRH2 765 aa17.23■□□□□ 0.35
CALD1-207ENST00000430085 PTH1RQ03431 593 aa17.22■□□□□ 0.35
CALD1-207ENST00000430085 TICAM2Q86XR7 235 aa17.22■□□□□ 0.35
CALD1-207ENST00000430085 SPEF2Q9C093 1822 aa17.22■□□□□ 0.35
CALD1-207ENST00000430085 KCNJ4P48050 445 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 FKBP4Q02790 459 aaKnown RBP eCLIP17.21■□□□□ 0.35
CALD1-207ENST00000430085 PUM3Q15397 648 aaKnown RBP17.21■□□□□ 0.35
CALD1-207ENST00000430085 NBPF5PQ86XG9 351 aaPredicted RBP17.21■□□□□ 0.35
CALD1-207ENST00000430085 IL27Q8NEV9 243 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 CDC5LQ99459 802 aaKnown RBP17.21■□□□□ 0.35
CALD1-207ENST00000430085 CHMP5Q9NZZ3 219 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 MED23Q9ULK4 1368 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 MCM2P49736 904 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 AMIGO3Q86WK7 504 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 STK32BQ9NY57 414 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 SNX14Q9Y5W7 946 aa17.21■□□□□ 0.35
CALD1-207ENST00000430085 ADRA2BP18089 450 aa17.2■□□□□ 0.34
CALD1-207ENST00000430085 SLC15A2Q16348 729 aa17.2■□□□□ 0.34
CALD1-207ENST00000430085 LRRFIP1Q32MZ4 808 aaKnown RBP17.2■□□□□ 0.34
CALD1-207ENST00000430085 QSER1Q2KHR3 1735 aa17.2■□□□□ 0.34
CALD1-207ENST00000430085 SF3B3Q15393 1217 aaKnown RBP17.19■□□□□ 0.34
CALD1-207ENST00000430085 NFKBIBQ15653 356 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 MCMDC2Q4G0Z9 681 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 PRPF40BQ6NWY9 871 aaKnown RBP17.19■□□□□ 0.34
CALD1-207ENST00000430085 TPTE2Q6XPS3 522 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 LPIN2Q92539 896 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 TFCP2L1Q9NZI6 479 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 C4AP0C0L4 1744 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 COL24A1Q17RW2 1714 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 SLC5A1P13866 664 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 ZKSCAN1P17029 563 aaPredicted RBP17.19■□□□□ 0.34
CALD1-207ENST00000430085 HMGB2P26583 209 aaKnown RBP17.19■□□□□ 0.34
CALD1-207ENST00000430085 SLC10A5Q5PT55 438 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 HELBQ8NG08 1087 aaPredicted RBP17.19■□□□□ 0.34
CALD1-207ENST00000430085 MAP4K1Q92918 833 aa17.19■□□□□ 0.34
CALD1-207ENST00000430085 RBM8AQ9Y5S9 174 aaKnown RBP17.19■□□□□ 0.34
CALD1-207ENST00000430085 NPHP1O15259 732 aa17.18■□□□□ 0.34
CALD1-207ENST00000430085 ZNF589Q86UQ0 364 aaPredicted RBP17.18■□□□□ 0.34
CALD1-207ENST00000430085 UPF3BQ9BZI7 483 aaKnown RBP17.18■□□□□ 0.34
CALD1-207ENST00000430085 FOXD4L1Q9NU39 408 aa17.18■□□□□ 0.34
CALD1-207ENST00000430085 RNF20Q5VTR2 975 aa17.17■□□□□ 0.34
CALD1-207ENST00000430085 ANKRD18AQ8IVF6 992 aa17.17■□□□□ 0.34
CALD1-207ENST00000430085 RASEFQ8IZ41 740 aa17.17■□□□□ 0.34
CALD1-207ENST00000430085 ZNF512BQ96KM6 892 aaPredicted RBP17.17■□□□□ 0.34
CALD1-207ENST00000430085 HELLSQ9NRZ9 838 aa17.17■□□□□ 0.34
CALD1-207ENST00000430085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.17■□□□□ 0.34
CALD1-207ENST00000430085 R3HDM1Q15032 1099 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms