RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 PHLDB3Q6NSJ2 640 aa9.62□□□□□ -0.87
HMGB3P5-201ENST00000428894 EDEM1Q92611 657 aa9.62□□□□□ -0.87
HMGB3P5-201ENST00000428894 C9orf172C9J069 976 aa9.61□□□□□ -0.87
HMGB3P5-201ENST00000428894 ADAM23O75077 832 aa9.61□□□□□ -0.87
HMGB3P5-201ENST00000428894 DNM1Q05193 864 aaKnown RBP9.61□□□□□ -0.87
HMGB3P5-201ENST00000428894 DOC2BQ14184 412 aa9.61□□□□□ -0.87
HMGB3P5-201ENST00000428894 FMR1NBQ8N0W7 255 aaPredicted RBP9.61□□□□□ -0.87
HMGB3P5-201ENST00000428894 ABI2Q9NYB9 513 aaPredicted RBP9.61□□□□□ -0.87
HMGB3P5-201ENST00000428894 MTMR7Q9Y216 660 aa9.61□□□□□ -0.87
HMGB3P5-201ENST00000428894 SELPP16109 830 aa9.6□□□□□ -0.87
HMGB3P5-201ENST00000428894 EIF1AXP47813 144 aaKnown RBP9.6□□□□□ -0.87
HMGB3P5-201ENST00000428894 HYAL2Q12891 473 aa9.6□□□□□ -0.87
HMGB3P5-201ENST00000428894 COL13A1Q5TAT6 717 aaPredicted RBP9.6□□□□□ -0.87
HMGB3P5-201ENST00000428894 ELP3Q9H9T3 547 aa9.6□□□□□ -0.87
HMGB3P5-201ENST00000428894 K7ELQ4 463 aaPredicted RBP9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 RPLP1P05386 114 aaKnown RBP9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 PCSK2P16519 638 aa9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 GDF6Q6KF10 455 aaPredicted RBP9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 PDE12Q6L8Q7 609 aaKnown RBP9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 SHISA2Q6UWI4 295 aa9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 DTWD1Q8N5C7 304 aa9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 USTQ9Y2C2 406 aa9.59□□□□□ -0.87
HMGB3P5-201ENST00000428894 PDGFAP04085 211 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 CYP2E1P05181 493 aaPredicted RBP9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 AAMPQ13685 434 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 ALKBH2Q6NS38 261 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 ZNF438Q7Z4V0 828 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 FBXO11Q86XK2 927 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 TTC16Q8NEE8 873 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 LENG1Q96BZ8 264 aaPredicted RBP9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 SPACA7Q96KW9 195 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 GGNBP2Q9H3C7 697 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 TMEM63CQ9P1W3 806 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 TIMELESSQ9UNS1 1208 aa9.58□□□□□ -0.88
HMGB3P5-201ENST00000428894 ABL1P00519 1130 aa9.57□□□□□ -0.88
HMGB3P5-201ENST00000428894 MZF1P28698 734 aaPredicted RBP9.57□□□□□ -0.88
HMGB3P5-201ENST00000428894 C8orf34Q49A92 452 aa9.57□□□□□ -0.88
HMGB3P5-201ENST00000428894 IL22RA1Q8N6P7 574 aa9.57□□□□□ -0.88
HMGB3P5-201ENST00000428894 FAM13AO94988 1023 aa9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 NPR3P17342 541 aa9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 NRG1Q02297 640 aaPredicted RBP9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 FKBP4Q02790 459 aaKnown RBP eCLIP9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 ADGRE1Q14246 886 aa9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 XKR5Q6UX68 686 aa9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 ANO2Q9NQ90 1003 aa9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 CNTN3Q9P232 1028 aa9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 TRIM33Q9UPN9 1127 aa9.56□□□□□ -0.88
HMGB3P5-201ENST00000428894 A6NHS1 94 aa9.55□□□□□ -0.88
HMGB3P5-201ENST00000428894 ATP11AP98196 1134 aa9.55□□□□□ -0.88
HMGB3P5-201ENST00000428894 SF3B2Q13435 895 aaKnown RBP9.55□□□□□ -0.88
HMGB3P5-201ENST00000428894 MBTPS1Q14703 1052 aa9.55□□□□□ -0.88
HMGB3P5-201ENST00000428894 USP21Q9UK80 565 aa9.55□□□□□ -0.88
HMGB3P5-201ENST00000428894 POLIQ9UNA4 740 aa9.55□□□□□ -0.88
HMGB3P5-201ENST00000428894 DEAF1O75398 565 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P5-201ENST00000428894 KIF4AO95239 1232 aa9.54□□□□□ -0.88
HMGB3P5-201ENST00000428894 ZNF211Q13398 564 aaPredicted RBP9.54□□□□□ -0.88
HMGB3P5-201ENST00000428894 CEP135Q66GS9 1140 aa9.54□□□□□ -0.88
HMGB3P5-201ENST00000428894 B4GALNT3Q6L9W6 998 aa9.54□□□□□ -0.88
HMGB3P5-201ENST00000428894 NCAPG2Q86XI2 1143 aa9.54□□□□□ -0.88
HMGB3P5-201ENST00000428894 TPSG1Q9NRR2 321 aa9.54□□□□□ -0.88
HMGB3P5-201ENST00000428894 SMNDC1O75940 238 aaKnown RBP eCLIP9.53□□□□□ -0.88
HMGB3P5-201ENST00000428894 C1orf127Q8N9H9 656 aa9.53□□□□□ -0.88
HMGB3P5-201ENST00000428894 RASSF4Q9H2L5 321 aa9.53□□□□□ -0.88
HMGB3P5-201ENST00000428894 KANSL3Q9P2N6 904 aa9.53□□□□□ -0.88
HMGB3P5-201ENST00000428894 TXNRD3Q86VQ6 643 aa9.52□□□□□ -0.89
HMGB3P5-201ENST00000428894 CACTIN-AS1Q8N1I8 211 aa9.52□□□□□ -0.89
HMGB3P5-201ENST00000428894 SEMA6BQ9H3T3 888 aa9.52□□□□□ -0.89
HMGB3P5-201ENST00000428894 CES1P23141 567 aa9.51□□□□□ -0.89
HMGB3P5-201ENST00000428894 IGF2-ASQ6U949 168 aa9.51□□□□□ -0.89
HMGB3P5-201ENST00000428894 CEP120Q8N960 986 aa9.51□□□□□ -0.89
HMGB3P5-201ENST00000428894 PBX4Q9BYU1 374 aa9.51□□□□□ -0.89
HMGB3P5-201ENST00000428894 LACRTQ9GZZ8 138 aa9.51□□□□□ -0.89
HMGB3P5-201ENST00000428894 PPME1Q9Y570 386 aa9.51□□□□□ -0.89
HMGB3P5-201ENST00000428894 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.51□□□□□ -0.89
HMGB3P5-201ENST00000428894 DLL1O00548 723 aa9.5□□□□□ -0.89
HMGB3P5-201ENST00000428894 FZD6O60353 706 aa9.5□□□□□ -0.89
HMGB3P5-201ENST00000428894 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
HMGB3P5-201ENST00000428894 SALL4Q9UJQ4 1053 aa9.5□□□□□ -0.89
HMGB3P5-201ENST00000428894 CDC27P30260 824 aa9.49□□□□□ -0.89
HMGB3P5-201ENST00000428894 SETDB1Q15047 1291 aa9.49□□□□□ -0.89
HMGB3P5-201ENST00000428894 RETREG2Q8NC44 543 aa9.49□□□□□ -0.89
HMGB3P5-201ENST00000428894 PMEPA1Q969W9 287 aa9.49□□□□□ -0.89
HMGB3P5-201ENST00000428894 MUC3BQ9H195 1237 aa9.49□□□□□ -0.89
HMGB3P5-201ENST00000428894 CCDC87Q9NVE4 849 aa9.49□□□□□ -0.89
HMGB3P5-201ENST00000428894 LINC01387J3KSC0 135 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 ICMTO60725 284 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 USP5P45974 858 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 SERPINB4P48594 390 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 NKAPLQ5M9Q1 402 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 MAP4K3Q8IVH8 894 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 WFDC12Q8WWY7 111 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 CHRDQ9H2X0 955 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 SRA1Q9HD15 236 aaKnown RBP9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 EGFL7Q9UHF1 273 aa9.48□□□□□ -0.89
HMGB3P5-201ENST00000428894 ACPPP15309 386 aa9.47□□□□□ -0.89
HMGB3P5-201ENST00000428894 CDC25BP30305 580 aa9.47□□□□□ -0.89
HMGB3P5-201ENST00000428894 IREB2P48200 963 aaKnown RBP9.47□□□□□ -0.89
HMGB3P5-201ENST00000428894 EHHADHQ08426 723 aa9.47□□□□□ -0.89
HMGB3P5-201ENST00000428894 ADAMTSL4Q6UY14 1074 aa9.47□□□□□ -0.89
HMGB3P5-201ENST00000428894 POP1Q99575 1024 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms