RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 IVLP07476 585 aa6□□□□□ -1.45
RIF1-203ENST00000428287 BEND6Q5SZJ8 279 aaPredicted RBP6□□□□□ -1.45
RIF1-203ENST00000428287 FOXD4L5Q5VV16 416 aaPredicted RBP6□□□□□ -1.45
RIF1-203ENST00000428287 FOXD4L4Q8WXT5 416 aaPredicted RBP6□□□□□ -1.45
RIF1-203ENST00000428287 TACO1Q9BSH4 297 aaKnown RBP6□□□□□ -1.45
RIF1-203ENST00000428287 CEMIPQ8WUJ3 1361 aa6□□□□□ -1.45
RIF1-203ENST00000428287 NUP98P52948 1817 aa6□□□□□ -1.45
RIF1-203ENST00000428287 LAMB1P07942 1786 aa6□□□□□ -1.45
RIF1-203ENST00000428287 GOLGA6L19H0YKK7 550 aa6□□□□□ -1.45
RIF1-203ENST00000428287 EVCP57679 992 aa6□□□□□ -1.45
RIF1-203ENST00000428287 ZFP91Q96JP5 570 aaPredicted RBP6□□□□□ -1.45
RIF1-203ENST00000428287 ARGLU1Q9NWB6 273 aaPredicted RBP6□□□□□ -1.45
RIF1-203ENST00000428287 ARFGEF2Q9Y6D5 1785 aa6□□□□□ -1.45
RIF1-203ENST00000428287 FOXD4L6Q3SYB3 417 aaPredicted RBP6□□□□□ -1.45
RIF1-203ENST00000428287 FOXD4L3Q6VB84 417 aaPredicted RBP6□□□□□ -1.45
RIF1-203ENST00000428287 ANKRD36CQ5JPF3 1778 aa6□□□□□ -1.45
RIF1-203ENST00000428287 CDC37L1Q7L3B6 337 aa6□□□□□ -1.45
RIF1-203ENST00000428287 CWC15Q9P013 229 aaKnown RBP6□□□□□ -1.45
RIF1-203ENST00000428287 KIAA1468Q9P260 1216 aa6□□□□□ -1.45
RIF1-203ENST00000428287 CPS1P31327 1500 aa6□□□□□ -1.45
RIF1-203ENST00000428287 MYO1BO43795 1136 aa6□□□□□ -1.45
RIF1-203ENST00000428287 TPCN1Q9ULQ1 816 aa6□□□□□ -1.45
RIF1-203ENST00000428287 SLIT1O75093 1534 aa6□□□□□ -1.45
RIF1-203ENST00000428287 SFPQP23246 707 aaKnown RBP eCLIP5.99□□□□□ -1.45
RIF1-203ENST00000428287 GJB2P29033 226 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 APOBRQ0VD83 1088 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 STX1AQ16623 288 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 ARMCX5Q6P1M9 558 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 CCDC150Q8NCX0 1101 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 GTF3C6Q969F1 213 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 PIK3C2AO00443 1686 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 CLGNO14967 610 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 RESTQ13127 1097 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 BRD3Q15059 726 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 CKAP2LQ8IYA6 745 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 ANO10Q9NW15 660 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 DNAI1Q9UI46 699 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 PIKFYVEQ9Y2I7 2098 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 SALL1Q9NSC2 1324 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 ZC3H4Q9UPT8 1303 aaKnown RBP5.99□□□□□ -1.45
RIF1-203ENST00000428287 USP31Q70CQ4 1352 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 GOLGA6L9A6NEM1 432 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 ATP2B1P20020 1258 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 NAA16Q6N069 864 aaPredicted RBP5.99□□□□□ -1.45
RIF1-203ENST00000428287 SMARCC2Q8TAQ2 1214 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 DNAJC25Q9H1X3 360 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 NCAPD2Q15021 1401 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 MRC1P22897 1456 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 A0A1W2PQ27 194 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 A0A1W2PQ64 194 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 A0A1W2PQD8 194 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 IKBKBO14920 756 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 HDGFL2Q7Z4V5 671 aaPredicted RBP5.99□□□□□ -1.45
RIF1-203ENST00000428287 FMR1NBQ8N0W7 255 aaPredicted RBP5.99□□□□□ -1.45
RIF1-203ENST00000428287 RUFY2Q8WXA3 655 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 PPP1R13BQ96KQ4 1090 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 MED4Q9NPJ6 270 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 ARHGAP6O43182 974 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 PPM1EQ8WY54 764 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 CYP46A1Q9Y6A2 500 aa5.99□□□□□ -1.45
RIF1-203ENST00000428287 SF3B2Q13435 895 aaKnown RBP5.99□□□□□ -1.45
RIF1-203ENST00000428287 MYCBPQ99417 103 aaPredicted RBP5.99□□□□□ -1.45
RIF1-203ENST00000428287 KDM6AO15550 1401 aaPredicted RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 HMOX1P09601 288 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 COL9A3Q14050 684 aaPredicted RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 FAM173BQ6P4H8 233 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 LRRN4CLQ8ND94 238 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.98□□□□□ -1.45
RIF1-203ENST00000428287 RRP15Q9Y3B9 282 aaKnown RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 CASZ1Q86V15 1759 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 TAF1P21675 1872 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 SLC4A2P04920 1241 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 FLIIQ13045 1269 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 MSANTD4Q8NCY6 345 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 LRRFIP2Q9Y608 721 aaKnown RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 FAM83GA6ND36 823 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 WDR93Q6P2C0 686 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 DHX40Q8IX18 779 aaKnown RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 NEK11Q8NG66 645 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 AK7Q96M32 723 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 HMG20BQ9P0W2 317 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 NUMA1Q14980 2115 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 NWD1Q149M9 1564 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 SHOX2O60902 331 aaPredicted RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 SRPK2P78362 688 aaKnown RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 PLCB2Q00722 1185 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 RHPN1Q8TCX5 695 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 ZNF638Q14966 1978 aaKnown RBP5.98□□□□□ -1.45
RIF1-203ENST00000428287 ERICH4A6NGS2 130 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 SRGAP3O43295 1099 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 CCP110O43303 1012 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 NRDCO43847 1150 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 TSHZ3Q63HK5 1081 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 SMARCE1Q969G3 411 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 OTOFQ9HC10 1997 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 CABP1Q9NZU7 370 aa5.98□□□□□ -1.45
RIF1-203ENST00000428287 RFX7Q2KHR2 1363 aa5.97□□□□□ -1.45
RIF1-203ENST00000428287 ZKSCAN1P17029 563 aaPredicted RBP5.97□□□□□ -1.45
RIF1-203ENST00000428287 AARSP49588 968 aaKnown RBP eCLIP5.97□□□□□ -1.45
RIF1-203ENST00000428287 FAM160A1Q05DH4 1040 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms