RNA–Protein interactions for RNA: ENST00000423325.6

SRPK1-205, Transcript of SRSF protein kinase 1, humanhuman

TSL 2 BASIC

Gene SRPK1, Length 4,357 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-205ENST00000423325 NKX2-3Q8TAU0 364 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 XAGE2Q96GT9 111 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 M0R2C6 588 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 EPB41L2O43491 1005 aaKnown RBP11.53□□□□□ -0.56
SRPK1-205ENST00000423325 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 TAF1P21675 1872 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 LOC102724428A0A0B4J2F2 783 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 IRS4O14654 1257 aaPredicted RBP11.53□□□□□ -0.56
SRPK1-205ENST00000423325 EIF5P55010 431 aaKnown RBP11.53□□□□□ -0.56
SRPK1-205ENST00000423325 SIK1P57059 783 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 TTLL5Q6EMB2 1281 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 AMIGO3Q86WK7 504 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 TRMT112Q9UI30 125 aaKnown RBP11.53□□□□□ -0.56
SRPK1-205ENST00000423325 LIMCH1Q9UPQ0 1083 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 RIPOR2Q9Y4F9 1068 aa11.53□□□□□ -0.56
SRPK1-205ENST00000423325 MYH3P11055 1940 aa11.52□□□□□ -0.56
SRPK1-205ENST00000423325 GADD45BO75293 160 aaPredicted RBP11.52□□□□□ -0.56
SRPK1-205ENST00000423325 TPRNQ4KMQ1 711 aa11.52□□□□□ -0.56
SRPK1-205ENST00000423325 INTS4Q96HW7 963 aaKnown RBP11.52□□□□□ -0.56
SRPK1-205ENST00000423325 LAMA4Q16363 1823 aa11.52□□□□□ -0.56
SRPK1-205ENST00000423325 AKAP11Q9UKA4 1901 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 MCM2P49736 904 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 CTSWP56202 376 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 FKBP4Q02790 459 aaKnown RBP eCLIP11.52□□□□□ -0.57
SRPK1-205ENST00000423325 C8orf37Q96NL8 207 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 TEX13AQ9BXU3 409 aaPredicted RBP11.52□□□□□ -0.57
SRPK1-205ENST00000423325 SEC31BQ9NQW1 1179 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 DDX49Q9Y6V7 483 aaKnown RBP11.52□□□□□ -0.57
SRPK1-205ENST00000423325 SLC51AQ86UW1 340 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 VGLL2Q8N8G2 317 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 OSBP2Q969R2 916 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 PLA2G12BQ9BX93 195 aa11.52□□□□□ -0.57
SRPK1-205ENST00000423325 MAST3O60307 1309 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 CIAO1O76071 339 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 ZAP70P43403 619 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 USPL1Q5W0Q7 1092 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 CAVIN1Q6NZI2 390 aaKnown RBP11.51□□□□□ -0.57
SRPK1-205ENST00000423325 ZNF34Q8IZ26 560 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 BCL9LQ86UU0 1499 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 PPFIA3O75145 1194 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 IFIT1P09914 478 aaKnown RBP11.51□□□□□ -0.57
SRPK1-205ENST00000423325 C3orf67Q6ZVT6 689 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 NWD2Q9ULI1 1742 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 SYT1P21579 422 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 STK3Q13188 491 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 IFIT5Q13325 482 aaKnown RBP11.51□□□□□ -0.57
SRPK1-205ENST00000423325 CYP46A1Q9Y6A2 500 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 CEP126Q9P2H0 1117 aa11.51□□□□□ -0.57
SRPK1-205ENST00000423325 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 GOLGA6L3A6NEY3 463 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 CAMTA2O94983 1202 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 NCLP19338 710 aaKnown RBP11.5□□□□□ -0.57
SRPK1-205ENST00000423325 IL6STP40189 918 aaPredicted RBP11.5□□□□□ -0.57
SRPK1-205ENST00000423325 MCAMP43121 646 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 TMEM63CQ9P1W3 806 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 MCMDC2Q4G0Z9 681 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 CHST3Q7LGC8 479 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 TM6SF1Q9BZW5 370 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 GPR108Q9NPR9 543 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 DENND2AQ9ULE3 1009 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 SPEF2Q9C093 1822 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 KLHL40Q2TBA0 621 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 LDHAL6AQ6ZMR3 332 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 LINC00116Q8NCU8 138 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 GPHNQ9NQX3 736 aaPredicted RBP11.5□□□□□ -0.57
SRPK1-205ENST00000423325 CCDC87Q9NVE4 849 aa11.5□□□□□ -0.57
SRPK1-205ENST00000423325 RPS6KB1P23443 525 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 GJB2P29033 226 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 FAM173BQ6P4H8 233 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 CDHR2Q9BYE9 1310 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 HIP1O00291 1037 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 ZMYM1Q5SVZ6 1142 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 DDX60Q8IY21 1712 aaKnown RBP11.49□□□□□ -0.57
SRPK1-205ENST00000423325 PUS7LQ9H0K6 701 aaKnown RBP11.49□□□□□ -0.57
SRPK1-205ENST00000423325 TAF7LQ5H9L4 462 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 METTL24Q5JXM2 366 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 CNPY2Q9Y2B0 182 aa11.49□□□□□ -0.57
SRPK1-205ENST00000423325 JAK2O60674 1132 aa11.48□□□□□ -0.57
SRPK1-205ENST00000423325 HSPD1P10809 573 aaKnown RBP11.48□□□□□ -0.57
SRPK1-205ENST00000423325 ZKSCAN1P17029 563 aaPredicted RBP11.48□□□□□ -0.57
SRPK1-205ENST00000423325 PHKA1P46020 1223 aa11.48□□□□□ -0.57
SRPK1-205ENST00000423325 SH3TC1Q8TE82 1336 aa11.48□□□□□ -0.57
SRPK1-205ENST00000423325 UBAP1LF5GYI3 381 aa11.48□□□□□ -0.57
SRPK1-205ENST00000423325 CCDC24Q8N4L8 307 aa11.48□□□□□ -0.57
SRPK1-205ENST00000423325 GRPEL1Q9HAV7 217 aa11.48□□□□□ -0.57
SRPK1-205ENST00000423325 ATP2B3Q16720 1220 aa11.47□□□□□ -0.57
SRPK1-205ENST00000423325 ZSCAN23Q3MJ62 389 aa11.47□□□□□ -0.57
SRPK1-205ENST00000423325 BLOC1S2Q6QNY1 142 aa11.47□□□□□ -0.57
SRPK1-205ENST00000423325 PIH1D3Q9NQM4 214 aaKnown RBP11.47□□□□□ -0.57
SRPK1-205ENST00000423325 RREB1Q92766 1687 aa11.47□□□□□ -0.57
SRPK1-205ENST00000423325 MTMR6Q9Y217 621 aa11.47□□□□□ -0.57
SRPK1-205ENST00000423325 THRAP3Q9Y2W1 955 aaKnown RBP11.47□□□□□ -0.57
SRPK1-205ENST00000423325 HAND2P61296 217 aa11.47□□□□□ -0.57
SRPK1-205ENST00000423325 TTC39AQ5SRH9 613 aa11.47□□□□□ -0.57
SRPK1-205ENST00000423325 COL5A3P25940 1745 aaPredicted RBP11.47□□□□□ -0.57
SRPK1-205ENST00000423325 ERVV-1B6SEH8 477 aa11.46□□□□□ -0.57
SRPK1-205ENST00000423325 STX6O43752 255 aa11.46□□□□□ -0.57
SRPK1-205ENST00000423325 BARGINQ6ZT62 677 aa11.46□□□□□ -0.57
SRPK1-205ENST00000423325 USP48Q86UV5 1035 aa11.46□□□□□ -0.57
SRPK1-205ENST00000423325 CNNM1Q9NRU3 951 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms