RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 CCDC85AQ96PX6 553 aaPredicted RBP20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 TRMT112Q9UI30 125 aaKnown RBP20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 SMC3Q9UQE7 1217 aa20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 CICQ96RK0 1608 aaPredicted RBP20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 A0A0G2JS52 829 aa20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 MRE11P49959 708 aa20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 GORABQ5T7V8 394 aa20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 MARCH10Q8NA82 808 aaPredicted RBP20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 TTLL11Q8NHH1 800 aa20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 ALDH8A1Q9H2A2 487 aaPredicted RBP20.57■□□□□ 0.88
LRRTM1-202ENST00000409148 IRS4O14654 1257 aaPredicted RBP20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 PRPF40AO75400 957 aaKnown RBP20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 LARP6Q9BRS8 491 aaKnown RBP20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 CCDC87Q9NVE4 849 aa20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 TBC1D2BQ9UPU7 963 aa20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 ANKRD18BA2A2Z9 1011 aa20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 RPS6KB1P23443 525 aa20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 LRRFIP1Q32MZ4 808 aaKnown RBP20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 TTC39AQ5SRH9 613 aa20.56■□□□□ 0.88
LRRTM1-202ENST00000409148 RREB1Q92766 1687 aa20.55■□□□□ 0.88
LRRTM1-202ENST00000409148 PDE8AO60658 829 aa20.55■□□□□ 0.88
LRRTM1-202ENST00000409148 ITGA6P23229 1130 aa20.55■□□□□ 0.88
LRRTM1-202ENST00000409148 ZNF34Q8IZ26 560 aa20.55■□□□□ 0.88
LRRTM1-202ENST00000409148 ACSBG1Q96GR2 724 aa20.55■□□□□ 0.88
LRRTM1-202ENST00000409148 SEC62Q99442 399 aaKnown RBP20.55■□□□□ 0.88
LRRTM1-202ENST00000409148 LARGE1O95461 756 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 ATP6V1AP38606 617 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 EIF5P55010 431 aaKnown RBP20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 CCDC129Q6ZRS4 1044 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 CCDC83Q8IWF9 413 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 SYNE4Q8N205 404 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 XAGE2Q96GT9 111 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 ABCC12Q96J65 1359 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 RIC1Q4ADV7 1423 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 ZMYM1Q5SVZ6 1142 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 LDHAL6AQ6ZMR3 332 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 GREM2Q9H772 168 aa20.54■□□□□ 0.88
LRRTM1-202ENST00000409148 LOC102724428A0A0B4J2F2 783 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 XRCC6P12956 609 aaKnown RBP eCLIP20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 SIK1P57059 783 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 METTL24Q5JXM2 366 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 INTS5Q6P9B9 1019 aaKnown RBP20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 AK7Q96M32 723 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 RNF113AO15541 343 aaKnown RBP20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 NCLP19338 710 aaKnown RBP20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 CRKLP46109 303 aaKnown RBP20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 DSCC1Q9BVC3 393 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 GRPEL1Q9HAV7 217 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 RIPOR2Q9Y4F9 1068 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 UBN2Q6ZU65 1347 aa20.53■□□□□ 0.88
LRRTM1-202ENST00000409148 CHGBP05060 677 aa20.52■□□□□ 0.88
LRRTM1-202ENST00000409148 ATP2B3Q16720 1220 aa20.52■□□□□ 0.88
LRRTM1-202ENST00000409148 ME3Q16798 604 aa20.52■□□□□ 0.88
LRRTM1-202ENST00000409148 PKNOX2Q96KN3 472 aa20.52■□□□□ 0.88
LRRTM1-202ENST00000409148 CNNM1Q9NRU3 951 aa20.52■□□□□ 0.88
LRRTM1-202ENST00000409148 STX6O43752 255 aa20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 ADORA1P30542 326 aa20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 SMARCC1Q92922 1105 aaPredicted RBP20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 NEK1Q96PY6 1258 aa20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 TPCN1Q9ULQ1 816 aa20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 TAF6LQ9Y6J9 622 aa20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 MBD3O95983 291 aa20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 ZSCAN22P10073 491 aaPredicted RBP20.51■□□□□ 0.87
LRRTM1-202ENST00000409148 SYT1P21579 422 aa20.5■□□□□ 0.87
LRRTM1-202ENST00000409148 GJB2P29033 226 aa20.5■□□□□ 0.87
LRRTM1-202ENST00000409148 FKBP4Q02790 459 aaKnown RBP eCLIP20.5■□□□□ 0.87
LRRTM1-202ENST00000409148 ZFYP08048 801 aaPredicted RBP20.5■□□□□ 0.87
LRRTM1-202ENST00000409148 PDIA4P13667 645 aaKnown RBP20.5■□□□□ 0.87
LRRTM1-202ENST00000409148 GLIPR1L2Q4G1C9 344 aa20.5■□□□□ 0.87
LRRTM1-202ENST00000409148 CAVIN1Q6NZI2 390 aaKnown RBP20.5■□□□□ 0.87
LRRTM1-202ENST00000409148 CYP21A2P08686 494 aa20.49■□□□□ 0.87
LRRTM1-202ENST00000409148 CHAMP1Q96JM3 812 aa20.49■□□□□ 0.87
LRRTM1-202ENST00000409148 ATP6V1DQ9Y5K8 247 aa20.49■□□□□ 0.87
LRRTM1-202ENST00000409148 LRP5O75197 1615 aa20.49■□□□□ 0.87
LRRTM1-202ENST00000409148 MAST3O60307 1309 aa20.48■□□□□ 0.87
LRRTM1-202ENST00000409148 TOB2Q14106 344 aaPredicted RBP20.48■□□□□ 0.87
LRRTM1-202ENST00000409148 PARP10Q53GL7 1025 aa20.48■□□□□ 0.87
LRRTM1-202ENST00000409148 GPT2Q8TD30 523 aa20.48■□□□□ 0.87
LRRTM1-202ENST00000409148 HMGB1P09429 215 aaKnown RBP20.48■□□□□ 0.87
LRRTM1-202ENST00000409148 ST3GAL1Q11201 340 aa20.48■□□□□ 0.87
LRRTM1-202ENST00000409148 ITPK1Q13572 414 aa20.48■□□□□ 0.87
LRRTM1-202ENST00000409148 ZNF445P59923 1031 aa20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 GAS2L3Q86XJ1 694 aa20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 ZNF831Q5JPB2 1677 aa20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 CAMTA2O94983 1202 aa20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 F13A1P00488 732 aa20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 HSP90B1P14625 803 aaKnown RBP20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 NECAB1Q8N987 351 aa20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 ZNF512BQ96KM6 892 aaPredicted RBP20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 TCEANC2Q96MN5 208 aa20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 UTP14AQ9BVJ6 771 aaKnown RBP20.47■□□□□ 0.87
LRRTM1-202ENST00000409148 COL5A3P25940 1745 aaPredicted RBP20.46■□□□□ 0.87
LRRTM1-202ENST00000409148 HSPD1P10809 573 aaKnown RBP20.46■□□□□ 0.87
LRRTM1-202ENST00000409148 COL9A3Q14050 684 aaPredicted RBP20.46■□□□□ 0.87
LRRTM1-202ENST00000409148 ZSCAN23Q3MJ62 389 aa20.46■□□□□ 0.87
LRRTM1-202ENST00000409148 SUSD4Q5VX71 490 aa20.46■□□□□ 0.87
LRRTM1-202ENST00000409148 VGLL2Q8N8G2 317 aa20.46■□□□□ 0.87
LRRTM1-202ENST00000409148 MROH5Q6ZUA9 1318 aa20.46■□□□□ 0.87
LRRTM1-202ENST00000409148 MYH7P12883 1935 aa20.45■□□□□ 0.86
LRRTM1-202ENST00000409148 PDE8BO95263 885 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms