RNA–Protein interactions for RNA: ENST00000398849.6

AC005562.1-202, humanhuman

TSL 2

Gene AC005562.1, Length 1,411 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC005562.1-202ENST00000398849 HLFQ16534 295 aa11.3□□□□□ -0.6
AC005562.1-202ENST00000398849 MIS18AQ9NYP9 233 aa11.3□□□□□ -0.6
AC005562.1-202ENST00000398849 NIP7Q9Y221 180 aaKnown RBP eCLIP11.3□□□□□ -0.6
AC005562.1-202ENST00000398849 CHL1O00533 1208 aa11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 HOXB7P09629 217 aa11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 PRSS12P56730 875 aa11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 RIPK4P57078 832 aa11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 PRPF40BQ6NWY9 871 aaKnown RBP11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 GIGYF2Q6Y7W6 1299 aaKnown RBP11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 ZNF34Q8IZ26 560 aa11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 ZNF622Q969S3 477 aaKnown RBP eCLIP11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 THUMPD2Q9BTF0 503 aaKnown RBP11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 NYXQ9GZU5 481 aa11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 PRKRIP1Q9H875 184 aaPredicted RBP11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 RNF123Q5XPI4 1314 aa11.29□□□□□ -0.6
AC005562.1-202ENST00000398849 HOXA10P31260 410 aaPredicted RBP11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 DDX10Q13206 875 aaKnown RBP11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 AMHR2Q16671 573 aa11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 RUNDC1Q96C34 613 aa11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 CDCA7LQ96GN5 454 aa11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 KCNK17Q96T54 332 aa11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 TAOK3Q9H2K8 898 aa11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 TSPYL4Q9UJ04 414 aa11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 ABCC12Q96J65 1359 aa11.28□□□□□ -0.6
AC005562.1-202ENST00000398849 POTECB2RU33 542 aa11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 C21orf2O43822 256 aa11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 VEGFAP15692 232 aaPredicted RBP11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 ALDH1B1P30837 517 aa11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 GRIPAP1Q4V328 841 aa11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 DNAJC5GQ8N7S2 189 aa11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 TTC13Q8NBP0 860 aa11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 LAMB2P55268 1798 aa11.27□□□□□ -0.6
AC005562.1-202ENST00000398849 UBN2Q6ZU65 1347 aa11.27□□□□□ -0.61
AC005562.1-202ENST00000398849 FAM161AQ3B820 660 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 PARP10Q53GL7 1025 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 CCDC93Q567U6 631 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 SLC10A5Q5PT55 438 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 CC2D2BQ6DHV5 1058 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 KIF6Q6ZMV9 814 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 TTLL7Q6ZT98 887 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 NTSR2O95665 410 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 RTKN2Q8IZC4 609 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 CCDC24Q8N4L8 307 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 SMC1BQ8NDV3 1235 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 PSMD1Q99460 953 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 KDM4CQ9H3R0 1056 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 RRAGCQ9HB90 399 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 ADGRG1Q9Y653 693 aa11.26□□□□□ -0.61
AC005562.1-202ENST00000398849 ADAMTSL1Q8N6G6 1762 aa11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 NPHP1O15259 732 aa11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 ZNF853P0CG23 659 aa11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 FKBP4Q02790 459 aaKnown RBP eCLIP11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 TTLL12Q14166 644 aaPredicted RBP11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 ERFEQ4G0M1 354 aa11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 POTEEQ6S8J3 1075 aa11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 CRAMP1Q96RY5 1269 aa11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 DDX21Q9NR30 783 aaKnown RBP eCLIP11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 ADAMTS8Q9UP79 889 aa11.25□□□□□ -0.61
AC005562.1-202ENST00000398849 TMEM132AQ24JP5 1023 aa11.24□□□□□ -0.61
AC005562.1-202ENST00000398849 HSP90AB3PQ58FF7 597 aa11.24□□□□□ -0.61
AC005562.1-202ENST00000398849 SUSD4Q5VX71 490 aa11.24□□□□□ -0.61
AC005562.1-202ENST00000398849 PARP9Q8IXQ6 854 aa11.24□□□□□ -0.61
AC005562.1-202ENST00000398849 C16orf71Q8IYS4 520 aaPredicted RBP11.24□□□□□ -0.61
AC005562.1-202ENST00000398849 RRP7AQ9Y3A4 280 aaKnown RBP11.24□□□□□ -0.61
AC005562.1-202ENST00000398849 CACNA1FO60840 1977 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 LRRC37AA6NMS7 1700 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 DDX60Q8IY21 1712 aaKnown RBP11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 ARHGAP33O14559 1287 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 OATP04181 439 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 MYL6BP14649 208 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 WDR43Q15061 677 aaKnown RBP eCLIP11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 PPP1R42Q7Z4L9 355 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 METTL3Q86U44 580 aaKnown RBP11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 JMYQ8N9B5 988 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 FAM198AQ9UFP1 575 aa11.23□□□□□ -0.61
AC005562.1-202ENST00000398849 FZD9O00144 591 aa11.22□□□□□ -0.61
AC005562.1-202ENST00000398849 PROSER3Q2NL68 480 aa11.22□□□□□ -0.61
AC005562.1-202ENST00000398849 ADGRD1Q6QNK2 874 aa11.22□□□□□ -0.61
AC005562.1-202ENST00000398849 PHOX2BQ99453 314 aa11.22□□□□□ -0.61
AC005562.1-202ENST00000398849 VPS33BQ9H267 617 aa11.22□□□□□ -0.61
AC005562.1-202ENST00000398849 ZBTB3Q9H5J0 574 aa11.22□□□□□ -0.61
AC005562.1-202ENST00000398849 TSKSQ9UJT2 592 aa11.22□□□□□ -0.61
AC005562.1-202ENST00000398849 TCIRG1Q13488 830 aa11.21□□□□□ -0.61
AC005562.1-202ENST00000398849 NUTM1Q86Y26 1132 aa11.21□□□□□ -0.61
AC005562.1-202ENST00000398849 IQCA1LA6NCM1 817 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 GTF2E1P29083 439 aaPredicted RBP11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 IARSP41252 1262 aaKnown RBP11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 PSEN2P49810 448 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 TRIM28Q13263 835 aaKnown RBP11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 COPS6Q7L5N1 327 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 PXYLP1Q8TE99 480 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 KLRG1Q96E93 195 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 UTP14AQ9BVJ6 771 aaKnown RBP11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 IFT57Q9NWB7 429 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 COL4A5P29400 1685 aa11.2□□□□□ -0.62
AC005562.1-202ENST00000398849 EIF2S2P20042 333 aaKnown RBP11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 GPTP24298 496 aa11.19□□□□□ -0.62
AC005562.1-202ENST00000398849 CALD1Q05682 793 aaKnown RBP11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms