RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 TM6SF1Q9BZW5 370 aa18.07■□□□□ 0.48
GPC3-202ENST00000394299 RIPOR2Q9Y4F9 1068 aa18.07■□□□□ 0.48
GPC3-202ENST00000394299 DDX49Q9Y6V7 483 aaKnown RBP18.07■□□□□ 0.48
GPC3-202ENST00000394299 NRAPQ86VF7 1730 aa18.07■□□□□ 0.48
GPC3-202ENST00000394299 CDHR2Q9BYE9 1310 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 A0A0G2JLW4 131 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 GORABQ5T7V8 394 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 ERVV-1B6SEH8 477 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 NCLP19338 710 aaKnown RBP18.06■□□□□ 0.48
GPC3-202ENST00000394299 ST3GAL1Q11201 340 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 ME3Q16798 604 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 METTL24Q5JXM2 366 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 FAM182BQ5T319 152 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 IL27Q8NEV9 243 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 TPCN1Q9ULQ1 816 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 SLIT2O94813 1529 aa18.06■□□□□ 0.48
GPC3-202ENST00000394299 BARGINQ6ZT62 677 aa18.05■□□□□ 0.48
GPC3-202ENST00000394299 GAS2L3Q86XJ1 694 aa18.05■□□□□ 0.48
GPC3-202ENST00000394299 HELBQ8NG08 1087 aaPredicted RBP18.05■□□□□ 0.48
GPC3-202ENST00000394299 TTC39AQ5SRH9 613 aa18.05■□□□□ 0.48
GPC3-202ENST00000394299 CNNM1Q9NRU3 951 aa18.05■□□□□ 0.48
GPC3-202ENST00000394299 WNK3Q9BYP7 1800 aa18.05■□□□□ 0.48
GPC3-202ENST00000394299 ANKRD18BA2A2Z9 1011 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 GOLGA6L3A6NEY3 463 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 SNAP23O00161 211 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 PALLDQ8WX93 1383 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 RPAP1Q9BWH6 1393 aaPredicted RBP18.04■□□□□ 0.48
GPC3-202ENST00000394299 FSD2A1L4K1 749 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 PDE8AO60658 829 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 CYP21A2P08686 494 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 SKOR2Q2VWA4 1001 aaPredicted RBP18.04■□□□□ 0.48
GPC3-202ENST00000394299 CCDC158Q5M9N0 1113 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 USPL1Q5W0Q7 1092 aa18.04■□□□□ 0.48
GPC3-202ENST00000394299 XRCC6P12956 609 aaKnown RBP eCLIP18.03■□□□□ 0.482e-6■■■■□ 20.1
GPC3-202ENST00000394299 ZAP70P43403 619 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 BLOC1S2Q6QNY1 142 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 NSFL1CQ9UNZ2 370 aaKnown RBP18.03■□□□□ 0.48
GPC3-202ENST00000394299 AKAP2Q9Y2D5 859 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 JCADQ9P266 1359 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 CAMTA2O94983 1202 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 GDPD2Q9HCC8 539 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 SEC31BQ9NQW1 1179 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 NUP98P52948 1817 aa18.03■□□□□ 0.48
GPC3-202ENST00000394299 ATP2B3Q16720 1220 aa18.02■□□□□ 0.48
GPC3-202ENST00000394299 ZMYM1Q5SVZ6 1142 aa18.02■□□□□ 0.48
GPC3-202ENST00000394299 PANK2Q9BZ23 570 aa18.02■□□□□ 0.48
GPC3-202ENST00000394299 RIC1Q4ADV7 1423 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 M0R2C6 588 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 RPS6KB1P23443 525 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 PSMA5P28066 241 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 TOB2Q14106 344 aaPredicted RBP18.02■□□□□ 0.47
GPC3-202ENST00000394299 GPT2Q8TD30 523 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 OSBP2Q969R2 916 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 SMC3Q9UQE7 1217 aa18.02■□□□□ 0.47
GPC3-202ENST00000394299 RNF113AO15541 343 aaKnown RBP18.01■□□□□ 0.47
GPC3-202ENST00000394299 SYT1P21579 422 aa18.01■□□□□ 0.47
GPC3-202ENST00000394299 KLHL40Q2TBA0 621 aa18.01■□□□□ 0.47
GPC3-202ENST00000394299 FBXO3Q9UK99 471 aa18.01■□□□□ 0.47
GPC3-202ENST00000394299 GJB2P29033 226 aa18.01■□□□□ 0.47
GPC3-202ENST00000394299 STK3Q13188 491 aa18.01■□□□□ 0.47
GPC3-202ENST00000394299 STOX1Q6ZVD7 989 aa18.01■□□□□ 0.47
GPC3-202ENST00000394299 RBM27Q9P2N5 1060 aaKnown RBP18.01■□□□□ 0.47
GPC3-202ENST00000394299 NIP7Q9Y221 180 aaKnown RBP eCLIP18.01■□□□□ 0.472e-12■■■□□ 14.6
GPC3-202ENST00000394299 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
GPC3-202ENST00000394299 MAST3O60307 1309 aa18■□□□□ 0.47
GPC3-202ENST00000394299 SH3TC1Q8TE82 1336 aa18■□□□□ 0.47
GPC3-202ENST00000394299 BCL9LQ86UU0 1499 aa18■□□□□ 0.47
GPC3-202ENST00000394299 CAVIN1Q6NZI2 390 aaKnown RBP18■□□□□ 0.47
GPC3-202ENST00000394299 VGLL2Q8N8G2 317 aa18■□□□□ 0.47
GPC3-202ENST00000394299 MCAMP43121 646 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 TSGA10IPQ3SY00 556 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 TTLL5Q6EMB2 1281 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 LINC00116Q8NCU8 138 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 NEK1Q96PY6 1258 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 HELLSQ9NRZ9 838 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.99■□□□□ 0.47
GPC3-202ENST00000394299 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
GPC3-202ENST00000394299 HSPD1P10809 573 aaKnown RBP17.99■□□□□ 0.47
GPC3-202ENST00000394299 PTMSP20962 102 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 TPRNQ4KMQ1 711 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 UTP14AQ9BVJ6 771 aaKnown RBP17.99■□□□□ 0.47
GPC3-202ENST00000394299 HMG20BQ9P0W2 317 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 RFX7Q2KHR2 1363 aa17.99■□□□□ 0.47
GPC3-202ENST00000394299 PDE8BO95263 885 aa17.98■□□□□ 0.47
GPC3-202ENST00000394299 WASHC4Q2M389 1173 aa17.98■□□□□ 0.47
GPC3-202ENST00000394299 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
GPC3-202ENST00000394299 STX6O43752 255 aa17.97■□□□□ 0.47
GPC3-202ENST00000394299 PHKA1P46020 1223 aa17.97■□□□□ 0.47
GPC3-202ENST00000394299 VPS72Q15906 364 aa17.97■□□□□ 0.47
GPC3-202ENST00000394299 L1TD1Q5T7N2 865 aaKnown RBP17.97■□□□□ 0.47
GPC3-202ENST00000394299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.97■□□□□ 0.47
GPC3-202ENST00000394299 PUS7LQ9H0K6 701 aaKnown RBP17.97■□□□□ 0.47
GPC3-202ENST00000394299 WDR33Q9C0J8 1336 aaKnown RBP17.97■□□□□ 0.47
GPC3-202ENST00000394299 Q6ZUG5 572 aa17.97■□□□□ 0.47
GPC3-202ENST00000394299 SH2B1Q9NRF2 756 aaPredicted RBP17.97■□□□□ 0.47
GPC3-202ENST00000394299 BICDL1Q6ZP65 573 aa17.96■□□□□ 0.47
GPC3-202ENST00000394299 FOXP2O15409 715 aa17.96■□□□□ 0.47
GPC3-202ENST00000394299 GADD45BO75293 160 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms