RNA–Protein interactions for RNA: ENST00000389547.7

PPFIA1-202, Transcript of PTPRF interacting protein alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPFIA1, Length 4,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-202ENST00000389547 NBPF5PQ86XG9 351 aaPredicted RBP22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 CERS3Q8IU89 383 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 KIF18AQ8NI77 898 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 IPO4Q8TEX9 1081 aaKnown RBP22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 GNPATO15228 680 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 GABPB1Q06547 395 aaPredicted RBP22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 TMCO3Q6UWJ1 677 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 FAM177A1Q8N128 213 aaPredicted RBP22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 UBXN4Q92575 508 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 DBNDD2Q9BQY9 259 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 RAI14Q9P0K7 980 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 CLIP2Q9UDT6 1046 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 MTMR7Q9Y216 660 aa22.04■■□□□ 1.12
PPFIA1-202ENST00000389547 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
PPFIA1-202ENST00000389547 CCDC191Q8NCU4 936 aa22.03■■□□□ 1.12
PPFIA1-202ENST00000389547 CNPY2Q9Y2B0 182 aa22.03■■□□□ 1.12
PPFIA1-202ENST00000389547 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.03■■□□□ 1.12
PPFIA1-202ENST00000389547 IL15P40933 162 aaPredicted RBP22.03■■□□□ 1.12
PPFIA1-202ENST00000389547 EDC3Q96F86 508 aaKnown RBP22.03■■□□□ 1.12
PPFIA1-202ENST00000389547 CEBPZQ03701 1054 aaKnown RBP22.02■■□□□ 1.12
PPFIA1-202ENST00000389547 PDRG1Q9NUG6 133 aa22.02■■□□□ 1.12
PPFIA1-202ENST00000389547 CHMLP26374 656 aa22.02■■□□□ 1.12
PPFIA1-202ENST00000389547 PPP1R1BQ9UD71 204 aaPredicted RBP22.02■■□□□ 1.12
PPFIA1-202ENST00000389547 PAXBP1Q9Y5B6 917 aa22.02■■□□□ 1.12
PPFIA1-202ENST00000389547 GNL3LQ9NVN8 582 aaKnown RBP22.01■■□□□ 1.11
PPFIA1-202ENST00000389547 SMC2O95347 1197 aa22.01■■□□□ 1.11
PPFIA1-202ENST00000389547 KRT85P78386 507 aa22.01■■□□□ 1.11
PPFIA1-202ENST00000389547 GPATCH11Q8N954 259 aa22.01■■□□□ 1.11
PPFIA1-202ENST00000389547 CHMP4CQ96CF2 233 aa22.01■■□□□ 1.11
PPFIA1-202ENST00000389547 MST1RQ04912 1400 aa22.01■■□□□ 1.11
PPFIA1-202ENST00000389547 SETDB2Q96T68 719 aa22■■□□□ 1.11
PPFIA1-202ENST00000389547 TCIRG1Q13488 830 aa22■■□□□ 1.11
PPFIA1-202ENST00000389547 UTP14AQ9BVJ6 771 aaKnown RBP22■■□□□ 1.11
PPFIA1-202ENST00000389547 CCNL1Q9UK58 526 aaPredicted RBP22■■□□□ 1.11
PPFIA1-202ENST00000389547 PPFIA3O75145 1194 aa22■■□□□ 1.11
PPFIA1-202ENST00000389547 BMS1Q14692 1282 aaKnown RBP22■■□□□ 1.11
PPFIA1-202ENST00000389547 SYNE3Q6ZMZ3 975 aa22■■□□□ 1.11
PPFIA1-202ENST00000389547 CCDC87Q9NVE4 849 aa21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 EAF2Q96CJ1 260 aaPredicted RBP21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 HAND2P61296 217 aa21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 UBE2HP62256 183 aa21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 GTF3C6Q969F1 213 aa21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 SOS2Q07890 1332 aaPredicted RBP21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 LOC102724428A0A0B4J2F2 783 aa21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 GADD45BO75293 160 aaPredicted RBP21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 SIK1P57059 783 aa21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 ANKIB1Q9P2G1 1089 aa21.99■■□□□ 1.11
PPFIA1-202ENST00000389547 HSP90B2PQ58FF3 399 aa21.98■■□□□ 1.11
PPFIA1-202ENST00000389547 CCDC73Q6ZRK6 1079 aa21.98■■□□□ 1.11
PPFIA1-202ENST00000389547 RTCBQ9Y3I0 505 aaKnown RBP21.98■■□□□ 1.11
PPFIA1-202ENST00000389547 SMTNL1A8MU46 457 aa21.98■■□□□ 1.11
PPFIA1-202ENST00000389547 RAD21O60216 631 aa21.98■■□□□ 1.11
PPFIA1-202ENST00000389547 IBTKQ9P2D0 1353 aaPredicted RBP21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 ITGA6P23229 1130 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 NMIQ13287 307 aaPredicted RBP21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 LARP1BQ659C4 914 aaKnown RBP21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 CCDC83Q8IWF9 413 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 AIDAQ96BJ3 306 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 TMX1Q9H3N1 280 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 ZNF219Q9P2Y4 722 aaPredicted RBP21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 IGKV5-2P06315 115 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 SETQ01105 290 aaPredicted RBP21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 ZNF397Q8NF99 534 aaPredicted RBP21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 USP26Q9BXU7 913 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 DEF6Q9H4E7 631 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 HEG1Q9ULI3 1381 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 EYA2O00167 538 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 CCDC152Q4G0S7 254 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 CPLX2Q6PUV4 134 aaKnown RBP21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 C10orf67Q8IYJ2 551 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 PDLIM2Q96JY6 352 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 SDF4Q9BRK5 362 aa21.97■■□□□ 1.11
PPFIA1-202ENST00000389547 DTNBO60941 627 aa21.96■■□□□ 1.11
PPFIA1-202ENST00000389547 A0A1B0GUL7 405 aa21.96■■□□□ 1.11
PPFIA1-202ENST00000389547 SLC5A1P13866 664 aa21.96■■□□□ 1.11
PPFIA1-202ENST00000389547 GTF2A1P52655 376 aaPredicted RBP21.96■■□□□ 1.11
PPFIA1-202ENST00000389547 UNC5CLQ8IV45 518 aa21.96■■□□□ 1.11
PPFIA1-202ENST00000389547 SSH2Q76I76 1423 aa21.96■■□□□ 1.11
PPFIA1-202ENST00000389547 TNNI3KQ59H18 835 aa21.95■■□□□ 1.11
PPFIA1-202ENST00000389547 CDC5LQ99459 802 aaKnown RBP21.95■■□□□ 1.11
PPFIA1-202ENST00000389547 NSFL1CQ9UNZ2 370 aaKnown RBP21.95■■□□□ 1.11
PPFIA1-202ENST00000389547 FPGT-TNNI3KV9GXZ4 949 aa21.95■■□□□ 1.11
PPFIA1-202ENST00000389547 USP32Q8NFA0 1604 aa21.95■■□□□ 1.1
PPFIA1-202ENST00000389547 SH3TC1Q8TE82 1336 aa21.95■■□□□ 1.1
PPFIA1-202ENST00000389547 CPA1P15085 419 aa21.95■■□□□ 1.1
PPFIA1-202ENST00000389547 DDX11Q96FC9 970 aa21.95■■□□□ 1.1
PPFIA1-202ENST00000389547 TTC41PQ6P2S7 1318 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 TDO2P48775 406 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 SF3B2Q13435 895 aaKnown RBP21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 KIF20BQ96Q89 1820 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 LRRC2Q9BYS8 371 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 ZBTB9Q96C00 473 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 SPATA32Q96LK8 384 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 FAM227BQ96M60 508 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 NLRP3Q96P20 1036 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 ATG3Q9NT62 314 aa21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 RBM8AQ9Y5S9 174 aaKnown RBP21.94■■□□□ 1.1
PPFIA1-202ENST00000389547 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
PPFIA1-202ENST00000389547 EPHA10Q5JZY3 1008 aa21.93■■□□□ 1.1
PPFIA1-202ENST00000389547 ERICH2A1L162 156 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms