RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 A0A0D9SFI3 127 aa25.93■■□□□ 1.74
GMDS-202ENST00000380815 PDE8BO95263 885 aa25.93■■□□□ 1.74
GMDS-202ENST00000380815 IFIT1P09914 478 aaKnown RBP25.93■■□□□ 1.74
GMDS-202ENST00000380815 GORABQ5T7V8 394 aa25.93■■□□□ 1.74
GMDS-202ENST00000380815 SPRYD3Q8NCJ5 442 aa25.93■■□□□ 1.74
GMDS-202ENST00000380815 SRP68Q9UHB9 627 aaKnown RBP25.93■■□□□ 1.74
GMDS-202ENST00000380815 NDUFB9Q9Y6M9 179 aa25.93■■□□□ 1.74
GMDS-202ENST00000380815 ADORA1P30542 326 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 LRRC4BQ9NT99 713 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 MED23Q9ULK4 1368 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 SPEF2Q9C093 1822 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 ERFEQ4G0M1 354 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 SLC27A3Q5K4L6 730 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 SLC10A5Q5PT55 438 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 DDX46Q7L014 1031 aaKnown RBP25.92■■□□□ 1.74
GMDS-202ENST00000380815 SETDB2Q96T68 719 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 NYXQ9GZU5 481 aa25.92■■□□□ 1.74
GMDS-202ENST00000380815 CCDC171Q6TFL3 1326 aa25.91■■□□□ 1.74
GMDS-202ENST00000380815 TTC39AQ5SRH9 613 aa25.91■■□□□ 1.74
GMDS-202ENST00000380815 TRAPPC3LQ5T215 181 aa25.91■■□□□ 1.74
GMDS-202ENST00000380815 AMIGO3Q86WK7 504 aa25.91■■□□□ 1.74
GMDS-202ENST00000380815 SEC31BQ9NQW1 1179 aa25.91■■□□□ 1.74
GMDS-202ENST00000380815 GOLIM4O00461 696 aa25.9■■□□□ 1.74
GMDS-202ENST00000380815 PTH1RQ03431 593 aa25.9■■□□□ 1.74
GMDS-202ENST00000380815 BICDL1Q6ZP65 573 aa25.9■■□□□ 1.74
GMDS-202ENST00000380815 MPHOSPH8Q99549 860 aa25.9■■□□□ 1.74
GMDS-202ENST00000380815 ADRA2BP18089 450 aa25.9■■□□□ 1.74
GMDS-202ENST00000380815 NEK4P51957 841 aa25.9■■□□□ 1.74
GMDS-202ENST00000380815 NBR1Q14596 966 aa25.9■■□□□ 1.74
GMDS-202ENST00000380815 SF3B3Q15393 1217 aaKnown RBP25.9■■□□□ 1.74
GMDS-202ENST00000380815 COL24A1Q17RW2 1714 aa25.89■■□□□ 1.74
GMDS-202ENST00000380815 RFC4P35249 363 aa25.89■■□□□ 1.73
GMDS-202ENST00000380815 IGHMBP2P38935 993 aaKnown RBP25.89■■□□□ 1.73
GMDS-202ENST00000380815 MAP4K1Q92918 833 aa25.89■■□□□ 1.73
GMDS-202ENST00000380815 ZNF512BQ96KM6 892 aaPredicted RBP25.89■■□□□ 1.73
GMDS-202ENST00000380815 TRIM37O94972 964 aa25.88■■□□□ 1.73
GMDS-202ENST00000380815 DDIT3P35638 169 aa25.88■■□□□ 1.73
GMDS-202ENST00000380815 PUM3Q15397 648 aaKnown RBP25.88■■□□□ 1.73
GMDS-202ENST00000380815 KCNB2Q92953 911 aa25.88■■□□□ 1.73
GMDS-202ENST00000380815 SNX14Q9Y5W7 946 aa25.88■■□□□ 1.73
GMDS-202ENST00000380815 GTF2E1P29083 439 aaPredicted RBP25.87■■□□□ 1.73
GMDS-202ENST00000380815 MCM2P49736 904 aa25.87■■□□□ 1.73
GMDS-202ENST00000380815 CDC5LQ99459 802 aaKnown RBP25.87■■□□□ 1.73
GMDS-202ENST00000380815 CHMP5Q9NZZ3 219 aa25.87■■□□□ 1.73
GMDS-202ENST00000380815 C4AP0C0L4 1744 aa25.87■■□□□ 1.73
GMDS-202ENST00000380815 HSP90AA1P07900 732 aaKnown RBP25.87■■□□□ 1.73
GMDS-202ENST00000380815 FGFR2P21802 821 aa25.87■■□□□ 1.73
GMDS-202ENST00000380815 LPIN2Q92539 896 aa25.87■■□□□ 1.73
GMDS-202ENST00000380815 NECTIN1Q15223 517 aa25.86■■□□□ 1.73
GMDS-202ENST00000380815 NBPF5PQ86XG9 351 aaPredicted RBP25.86■■□□□ 1.73
GMDS-202ENST00000380815 HMGB2P26583 209 aaKnown RBP25.85■■□□□ 1.73
GMDS-202ENST00000380815 MCMDC2Q4G0Z9 681 aa25.85■■□□□ 1.73
GMDS-202ENST00000380815 TPTE2Q6XPS3 522 aa25.85■■□□□ 1.73
GMDS-202ENST00000380815 ZNF589Q86UQ0 364 aaPredicted RBP25.85■■□□□ 1.73
GMDS-202ENST00000380815 RASEFQ8IZ41 740 aa25.85■■□□□ 1.73
GMDS-202ENST00000380815 FKBP4Q02790 459 aaKnown RBP eCLIP25.84■■□□□ 1.73
GMDS-202ENST00000380815 RBM8AQ9Y5S9 174 aaKnown RBP25.84■■□□□ 1.73
GMDS-202ENST00000380815 PHF14O94880 888 aa25.84■■□□□ 1.73
GMDS-202ENST00000380815 NFKBIBQ15653 356 aa25.84■■□□□ 1.73
GMDS-202ENST00000380815 HELLSQ9NRZ9 838 aa25.84■■□□□ 1.73
GMDS-202ENST00000380815 CIZ1Q9ULV3 898 aaPredicted RBP25.84■■□□□ 1.73
GMDS-202ENST00000380815 TAF5LO75529 589 aa25.83■■□□□ 1.73
GMDS-202ENST00000380815 LRRFIP1Q32MZ4 808 aaKnown RBP25.83■■□□□ 1.73
GMDS-202ENST00000380815 PRPF40BQ6NWY9 871 aaKnown RBP25.83■■□□□ 1.73
GMDS-202ENST00000380815 C3orf67Q6ZVT6 689 aa25.83■■□□□ 1.73
GMDS-202ENST00000380815 SCARF1Q14162 830 aa25.82■■□□□ 1.72
GMDS-202ENST00000380815 HELBQ8NG08 1087 aaPredicted RBP25.82■■□□□ 1.72
GMDS-202ENST00000380815 ARAP2Q8WZ64 1704 aa25.82■■□□□ 1.72
GMDS-202ENST00000380815 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.82■■□□□ 1.72
GMDS-202ENST00000380815 RNF113AO15541 343 aaKnown RBP25.82■■□□□ 1.72
GMDS-202ENST00000380815 SLC5A1P13866 664 aa25.82■■□□□ 1.72
GMDS-202ENST00000380815 SSFA2P28290 1259 aa25.82■■□□□ 1.72
GMDS-202ENST00000380815 KCNJ4P48050 445 aa25.82■■□□□ 1.72
GMDS-202ENST00000380815 ZMYM1Q5SVZ6 1142 aa25.82■■□□□ 1.72
GMDS-202ENST00000380815 UBR3Q6ZT12 1888 aa25.81■■□□□ 1.72
GMDS-202ENST00000380815 ZKSCAN1P17029 563 aaPredicted RBP25.81■■□□□ 1.72
GMDS-202ENST00000380815 ANKRD18AQ8IVF6 992 aa25.81■■□□□ 1.72
GMDS-202ENST00000380815 NLRP3Q96P20 1036 aa25.81■■□□□ 1.72
GMDS-202ENST00000380815 UPF3BQ9BZI7 483 aaKnown RBP25.81■■□□□ 1.72
GMDS-202ENST00000380815 CHGBP05060 677 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 UQCRFS1P1P0C7P4 283 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 ARID4AP29374 1257 aaPredicted RBP25.8■■□□□ 1.72
GMDS-202ENST00000380815 MCAMP43121 646 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 CREB3L3Q68CJ9 461 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 CCDC102BQ68D86 513 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 TM6SF1Q9BZW5 370 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 EP400Q96L91 3159 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 CARMIL3Q8ND23 1372 aa25.8■■□□□ 1.72
GMDS-202ENST00000380815 ZFYP08048 801 aaPredicted RBP25.79■■□□□ 1.72
GMDS-202ENST00000380815 ZAP70P43403 619 aa25.79■■□□□ 1.72
GMDS-202ENST00000380815 RNF20Q5VTR2 975 aa25.79■■□□□ 1.72
GMDS-202ENST00000380815 BSDC1Q9NW68 430 aaPredicted RBP25.79■■□□□ 1.72
GMDS-202ENST00000380815 CHRNDQ07001 517 aa25.79■■□□□ 1.72
GMDS-202ENST00000380815 SEC62Q99442 399 aaKnown RBP25.79■■□□□ 1.72
GMDS-202ENST00000380815 CASZ1Q86V15 1759 aa25.78■■□□□ 1.72
GMDS-202ENST00000380815 HMG20BQ9P0W2 317 aa25.78■■□□□ 1.72
GMDS-202ENST00000380815 AKAP11Q9UKA4 1901 aa25.78■■□□□ 1.72
GMDS-202ENST00000380815 SLC27A2O14975 620 aa25.77■■□□□ 1.72
GMDS-202ENST00000380815 PHKA1P46020 1223 aa25.77■■□□□ 1.72
GMDS-202ENST00000380815 NFIXQ14938 502 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms