RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 IL17RAQ96F46 866 aa16.7■□□□□ 0.26
TNFSF13-203ENST00000380535 ARID3AQ99856 593 aa16.7■□□□□ 0.26
TNFSF13-203ENST00000380535 MROH5Q6ZUA9 1318 aa16.69■□□□□ 0.26
TNFSF13-203ENST00000380535 LRRFIP1Q32MZ4 808 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-203ENST00000380535 LDHAL6AQ6ZMR3 332 aa16.69■□□□□ 0.26
TNFSF13-203ENST00000380535 HAUS7Q99871 368 aa16.69■□□□□ 0.26
TNFSF13-203ENST00000380535 LRRC24Q50LG9 513 aa16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 GREM2Q9H772 168 aa16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 CCDC158Q5M9N0 1113 aa16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 SLC10A5Q5PT55 438 aa16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 ZNF594Q96JF6 807 aaPredicted RBP16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 CNNM1Q9NRU3 951 aa16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 RIPOR2Q9Y4F9 1068 aa16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 C4AP0C0L4 1744 aa16.68■□□□□ 0.26
TNFSF13-203ENST00000380535 A0A1B0GUL7 405 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 CLSTN1O94985 981 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 NEUROD6Q96NK8 337 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 DBNDD2Q9BQY9 259 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 ANO2Q9NQ90 1003 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 SNRKQ9NRH2 765 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 ARAP2Q8WZ64 1704 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 METTL24Q5JXM2 366 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 FAM182BQ5T319 152 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 CNPY4Q8N129 248 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 SETDB2Q96T68 719 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 CDC5LQ99459 802 aaKnown RBP16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 FSD1Q9BTV5 496 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 BOLA2Q9H3K6 86 aa16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.67■□□□□ 0.26
TNFSF13-203ENST00000380535 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
TNFSF13-203ENST00000380535 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
TNFSF13-203ENST00000380535 ZNF512BQ96KM6 892 aaPredicted RBP16.66■□□□□ 0.26
TNFSF13-203ENST00000380535 RNF216Q9NWF9 866 aaPredicted RBP16.66■□□□□ 0.26
TNFSF13-203ENST00000380535 UBR3Q6ZT12 1888 aa16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 ST18O60284 1047 aa16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 RFC4P35249 363 aa16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 IGHMBP2P38935 993 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 GORABQ5T7V8 394 aa16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 PUS3Q9BZE2 481 aaKnown RBP16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 RIC1Q4ADV7 1423 aa16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 SYNE4Q8N205 404 aa16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 RGPD3A6NKT7 1758 aaPredicted RBP16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 RGPD4Q7Z3J3 1758 aa16.65■□□□□ 0.26
TNFSF13-203ENST00000380535 K7ELQ4 463 aaPredicted RBP16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 SSFA2P28290 1259 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 MCM2P49736 904 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 ATP2B3Q16720 1220 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 USPL1Q5W0Q7 1092 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 TPTE2Q6XPS3 522 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 MPHOSPH8Q99549 860 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 PDE8BO95263 885 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 CHMP5Q9NZZ3 219 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 BRPF3Q9ULD4 1205 aa16.64■□□□□ 0.25
TNFSF13-203ENST00000380535 HCLS1P14317 486 aaPredicted RBP16.63■□□□□ 0.25
TNFSF13-203ENST00000380535 RXRBP28702 533 aa16.63■□□□□ 0.25
TNFSF13-203ENST00000380535 DDIT3P35638 169 aa16.63■□□□□ 0.25
TNFSF13-203ENST00000380535 TTC39AQ5SRH9 613 aa16.63■□□□□ 0.25
TNFSF13-203ENST00000380535 KBTBD3Q8NAB2 608 aa16.63■□□□□ 0.25
TNFSF13-203ENST00000380535 ARHGEF1Q92888 912 aaKnown RBP16.63■□□□□ 0.25
TNFSF13-203ENST00000380535 BCL2L12Q9HB09 334 aa16.63■□□□□ 0.25
TNFSF13-203ENST00000380535 PLSCR1O15162 318 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 IFIT1P09914 478 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 HSPA4P34932 840 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 PUM3Q15397 648 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 CWC27Q6UX04 472 aaKnown RBP16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 CASZ1Q86V15 1759 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 CARMIL3Q8ND23 1372 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 TIMM10P62072 90 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 TBC1D9BQ66K14 1250 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 VGLL2Q8N8G2 317 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 LPIN2Q92539 896 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 XAGE2Q96GT9 111 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 PAG1Q9NWQ8 432 aa16.62■□□□□ 0.25
TNFSF13-203ENST00000380535 UQCRFS1P1P0C7P4 283 aa16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 NBPF5PQ86XG9 351 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 CCDC85AQ96PX6 553 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 LSG1Q9H089 658 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 RRP9O43818 475 aaKnown RBP16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 TRIM37O94972 964 aa16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 ZFYP08048 801 aaPredicted RBP16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 SLC5A1P13866 664 aa16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 KCNQ4P56696 695 aa16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 NLRP3Q96P20 1036 aa16.61■□□□□ 0.25
TNFSF13-203ENST00000380535 FAM177BA6PVY3 158 aa16.6■□□□□ 0.25
TNFSF13-203ENST00000380535 ERFEQ4G0M1 354 aa16.6■□□□□ 0.25
TNFSF13-203ENST00000380535 DNAJC2Q99543 621 aaKnown RBP16.6■□□□□ 0.25
TNFSF13-203ENST00000380535 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-203ENST00000380535 TTF1Q15361 905 aaPredicted RBP16.6■□□□□ 0.25
TNFSF13-203ENST00000380535 HELLSQ9NRZ9 838 aa16.6■□□□□ 0.25
TNFSF13-203ENST00000380535 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
TNFSF13-203ENST00000380535 CCDC171Q6TFL3 1326 aa16.59■□□□□ 0.25
TNFSF13-203ENST00000380535 RNF20Q5VTR2 975 aa16.59■□□□□ 0.25
TNFSF13-203ENST00000380535 ANKRD18AQ8IVF6 992 aa16.59■□□□□ 0.25
TNFSF13-203ENST00000380535 IL25Q9H293 177 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms