RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 TAOK3Q9H2K8 898 aa12.65□□□□□ -0.38
C9orf85-202ENST00000377027 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
C9orf85-202ENST00000377027 RABGEF1Q9UJ41 708 aa12.65□□□□□ -0.38
C9orf85-202ENST00000377027 NIP7Q9Y221 180 aaKnown RBP eCLIP12.65□□□□□ -0.38
C9orf85-202ENST00000377027 FAM177BA6PVY3 158 aa12.64□□□□□ -0.39
C9orf85-202ENST00000377027 ERFEQ4G0M1 354 aa12.64□□□□□ -0.39
C9orf85-202ENST00000377027 TTC13Q8NBP0 860 aa12.64□□□□□ -0.39
C9orf85-202ENST00000377027 SMC1BQ8NDV3 1235 aa12.64□□□□□ -0.39
C9orf85-202ENST00000377027 CNKSR1Q969H4 720 aa12.64□□□□□ -0.39
C9orf85-202ENST00000377027 KIAA1468Q9P260 1216 aa12.64□□□□□ -0.39
C9orf85-202ENST00000377027 FAM198AQ9UFP1 575 aa12.64□□□□□ -0.39
C9orf85-202ENST00000377027 RIC1Q4ADV7 1423 aa12.63□□□□□ -0.39
C9orf85-202ENST00000377027 DDNO94850 711 aaPredicted RBP12.63□□□□□ -0.39
C9orf85-202ENST00000377027 HIC1Q14526 733 aa12.63□□□□□ -0.39
C9orf85-202ENST00000377027 NUTM1Q86Y26 1132 aa12.63□□□□□ -0.39
C9orf85-202ENST00000377027 ZNF652Q9Y2D9 606 aa12.63□□□□□ -0.39
C9orf85-202ENST00000377027 TAF1P21675 1872 aa12.63□□□□□ -0.39
C9orf85-202ENST00000377027 MAP3K15Q6ZN16 1313 aa12.62□□□□□ -0.39
C9orf85-202ENST00000377027 ZNF541Q9H0D2 1346 aa12.62□□□□□ -0.39
C9orf85-202ENST00000377027 NPR1P16066 1061 aa12.62□□□□□ -0.39
C9orf85-202ENST00000377027 CRY2Q49AN0 593 aa12.62□□□□□ -0.39
C9orf85-202ENST00000377027 PADI6Q6TGC4 694 aa12.62□□□□□ -0.39
C9orf85-202ENST00000377027 NGEFQ8N5V2 710 aa12.62□□□□□ -0.39
C9orf85-202ENST00000377027 COL4A1P02462 1669 aa12.61□□□□□ -0.39
C9orf85-202ENST00000377027 IBTKQ9P2D0 1353 aaPredicted RBP12.61□□□□□ -0.39
C9orf85-202ENST00000377027 NPHP1O15259 732 aa12.61□□□□□ -0.39
C9orf85-202ENST00000377027 MYL6BP14649 208 aa12.61□□□□□ -0.39
C9orf85-202ENST00000377027 PROSER3Q2NL68 480 aa12.61□□□□□ -0.39
C9orf85-202ENST00000377027 NPM2Q86SE8 214 aaKnown RBP12.61□□□□□ -0.39
C9orf85-202ENST00000377027 PACS2Q86VP3 889 aa12.61□□□□□ -0.39
C9orf85-202ENST00000377027 DDX60Q8IY21 1712 aaKnown RBP12.6□□□□□ -0.39
C9orf85-202ENST00000377027 ERVV-1B6SEH8 477 aa12.6□□□□□ -0.39
C9orf85-202ENST00000377027 NTSR2O95665 410 aa12.6□□□□□ -0.39
C9orf85-202ENST00000377027 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
C9orf85-202ENST00000377027 CCDC93Q567U6 631 aa12.6□□□□□ -0.39
C9orf85-202ENST00000377027 TPTE2Q6XPS3 522 aa12.6□□□□□ -0.39
C9orf85-202ENST00000377027 PNISRQ8TF01 805 aaKnown RBP12.6□□□□□ -0.39
C9orf85-202ENST00000377027 ZBTB3Q9H5J0 574 aa12.6□□□□□ -0.39
C9orf85-202ENST00000377027 ZNF277Q9NRM2 450 aaPredicted RBP12.6□□□□□ -0.39
C9orf85-202ENST00000377027 RRP7AQ9Y3A4 280 aaKnown RBP12.6□□□□□ -0.39
C9orf85-202ENST00000377027 ANXA1P04083 346 aa12.59□□□□□ -0.39
C9orf85-202ENST00000377027 GPTP24298 496 aa12.59□□□□□ -0.39
C9orf85-202ENST00000377027 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
C9orf85-202ENST00000377027 ZNF34Q8IZ26 560 aa12.59□□□□□ -0.39
C9orf85-202ENST00000377027 FECHP22830 423 aa12.58□□□□□ -0.4
C9orf85-202ENST00000377027 KRT24Q2M2I5 525 aa12.58□□□□□ -0.4
C9orf85-202ENST00000377027 COL13A1Q5TAT6 717 aaPredicted RBP12.58□□□□□ -0.4
C9orf85-202ENST00000377027 SOGA3Q5TF21 947 aa12.58□□□□□ -0.4
C9orf85-202ENST00000377027 NBPF3Q9H094 633 aa12.58□□□□□ -0.4
C9orf85-202ENST00000377027 LRRC37AA6NMS7 1700 aa12.57□□□□□ -0.4
C9orf85-202ENST00000377027 C3orf80F5H4A9 247 aa12.57□□□□□ -0.4
C9orf85-202ENST00000377027 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
C9orf85-202ENST00000377027 RIPK4P57078 832 aa12.57□□□□□ -0.4
C9orf85-202ENST00000377027 GIGYF2Q6Y7W6 1299 aaKnown RBP12.57□□□□□ -0.4
C9orf85-202ENST00000377027 TAF1DQ9H5J8 278 aaPredicted RBP12.57□□□□□ -0.4
C9orf85-202ENST00000377027 TSPYL4Q9UJ04 414 aa12.57□□□□□ -0.4
C9orf85-202ENST00000377027 ERBB4Q15303 1308 aa12.57□□□□□ -0.4
C9orf85-202ENST00000377027 PASKQ96RG2 1323 aa12.57□□□□□ -0.4
C9orf85-202ENST00000377027 MAPK8IP3Q9UPT6 1336 aa12.57□□□□□ -0.4
C9orf85-202ENST00000377027 DUOX1Q9NRD9 1551 aa12.56□□□□□ -0.4
C9orf85-202ENST00000377027 FZD9O00144 591 aa12.56□□□□□ -0.4
C9orf85-202ENST00000377027 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
C9orf85-202ENST00000377027 IARSP41252 1262 aaKnown RBP12.56□□□□□ -0.4
C9orf85-202ENST00000377027 CCDC146Q8IYE0 955 aa12.56□□□□□ -0.4
C9orf85-202ENST00000377027 SYNE4Q8N205 404 aa12.56□□□□□ -0.4
C9orf85-202ENST00000377027 MRPL50Q8N5N7 158 aaKnown RBP12.56□□□□□ -0.4
C9orf85-202ENST00000377027 RALBP1Q15311 655 aa12.55□□□□□ -0.4
C9orf85-202ENST00000377027 KIF6Q6ZMV9 814 aa12.55□□□□□ -0.4
C9orf85-202ENST00000377027 ZC3H15Q8WU90 426 aaKnown RBP12.55□□□□□ -0.4
C9orf85-202ENST00000377027 TATDN2Q93075 761 aa12.55□□□□□ -0.4
C9orf85-202ENST00000377027 PSMD1Q99460 953 aa12.55□□□□□ -0.4
C9orf85-202ENST00000377027 ITGBL1O95965 494 aaPredicted RBP12.54□□□□□ -0.4
C9orf85-202ENST00000377027 NEFMP07197 916 aa12.54□□□□□ -0.4
C9orf85-202ENST00000377027 EIF2S2P20042 333 aaKnown RBP12.54□□□□□ -0.4
C9orf85-202ENST00000377027 ALDH1B1P30837 517 aa12.54□□□□□ -0.4
C9orf85-202ENST00000377027 DDX10Q13206 875 aaKnown RBP12.54□□□□□ -0.4
C9orf85-202ENST00000377027 RTKN2Q8IZC4 609 aa12.54□□□□□ -0.4
C9orf85-202ENST00000377027 NYXQ9GZU5 481 aa12.54□□□□□ -0.4
C9orf85-202ENST00000377027 SEPT9Q9UHD8 586 aaPredicted RBP12.54□□□□□ -0.4
C9orf85-202ENST00000377027 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
C9orf85-202ENST00000377027 MYBBP1AQ9BQG0 1328 aaKnown RBP12.54□□□□□ -0.4
C9orf85-202ENST00000377027 HSPA1AP0DMV8 641 aaKnown RBP12.53□□□□□ -0.4
C9orf85-202ENST00000377027 HSPA1BP0DMV9 641 aaKnown RBP12.53□□□□□ -0.4
C9orf85-202ENST00000377027 NUDT18Q6ZVK8 323 aa12.53□□□□□ -0.4
C9orf85-202ENST00000377027 LAPTM4BQ86VI4 370 aa12.53□□□□□ -0.4
C9orf85-202ENST00000377027 NECTIN2Q92692 538 aa12.53□□□□□ -0.4
C9orf85-202ENST00000377027 PNMA3Q9UL41 463 aa12.53□□□□□ -0.4
C9orf85-202ENST00000377027 SMAPO00193 183 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 CHL1O00533 1208 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 GTF2E1P29083 439 aaPredicted RBP12.52□□□□□ -0.41
C9orf85-202ENST00000377027 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 LDHDQ86WU2 507 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 XAGE3Q8WTP9 111 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 CRAMP1Q96RY5 1269 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 BABAM1Q9NWV8 329 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 ADGRG1Q9Y653 693 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 ABCC4O15439 1325 aa12.52□□□□□ -0.41
C9orf85-202ENST00000377027 THSD7BQ9C0I4 1608 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 TRPM7Q96QT4 1865 aa12.51□□□□□ -0.41
C9orf85-202ENST00000377027 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms