RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 KLHL31Q9H511 634 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 S100BP04271 92 aaPredicted RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 TROVE2P10155 538 aaKnown RBP eCLIP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 MRPL28Q13084 256 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 STX3Q13277 289 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 FYB2Q5VWT5 728 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 CROCCP2Q86T23 111 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 ARHGEF2Q92974 986 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 LTV1Q96GA3 475 aaPredicted RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 CEP19Q96LK0 163 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 TXLNGQ9NUQ3 528 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 TXNDC16Q9P2K2 825 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 ATP8A1Q9Y2Q0 1164 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 VGLL3A8MV65 326 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 PMS1P54277 932 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 FAPQ12884 760 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 COQ7Q99807 217 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 UTP6Q9NYH9 597 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 ATPIF1Q9UII2 106 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 GTPBP10A4D1E9 387 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 CREB3O43889 395 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 ATN1P54259 1190 aaPredicted RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 RAB14P61106 215 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 TSC22D3Q99576 134 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 TACO1Q9BSH4 297 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 COG4Q9H9E3 785 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 DSEQ9UL01 958 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 PAXBP1Q9Y5B6 917 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 ATP5DP30049 168 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 USH1GQ495M9 461 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 INTS3Q68E01 1043 aaKnown RBP6.74□□□□□ -1.33
SCN2A-202ENST00000375427 RCAN3Q9UKA8 241 aa6.74□□□□□ -1.33
SCN2A-202ENST00000375427 PLIN1O60240 522 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 EFCAB14O75071 495 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 KIAA0753Q2KHM9 967 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 THOC7Q6I9Y2 204 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 LRSAM1Q6UWE0 723 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 RAB11FIP4Q86YS3 637 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 PDCD10Q9BUL8 212 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 TRAK2O60296 914 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 CRCPO75575 148 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 ECE1P42892 770 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 SFSWAPQ12872 951 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 PDZD8Q8NEN9 1154 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 MED4Q9NPJ6 270 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 RHOXF2BP0C7M4 288 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 EEF1DP29692 281 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 IFI16Q16666 785 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 MFSD4BQ5TF39 518 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 RHOXF2Q9BQY4 288 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 BMP2KQ9NSY1 1161 aaPredicted RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 VPS18Q9P253 973 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 ZNF653Q96CK0 615 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 TBC1D31Q96DN5 1066 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 PPME1Q9Y570 386 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 CA8P35219 290 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 PLS1Q14651 629 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 C16orf87Q6PH81 154 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 EXOC1Q9NV70 894 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 ORC6Q9Y5N6 252 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 CUL3Q13618 768 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 CEP85Q6P2H3 762 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 NBPF10Q6P3W6 841 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 STXBP4Q6ZWJ1 553 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 KIFAP3Q92845 792 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 UBE2OQ9C0C9 1292 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 TNMDQ9H2S6 317 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 PPFIA4O75335 1185 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 WDR75Q8IWA0 830 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 ARL10Q8N8L6 244 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 BBOF1Q8ND07 529 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 API5Q9BZZ5 524 aaKnown RBP6.73□□□□□ -1.33
SCN2A-202ENST00000375427 SUFUQ9UMX1 484 aa6.73□□□□□ -1.33
SCN2A-202ENST00000375427 CWC27Q6UX04 472 aaKnown RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 STX1BP61266 288 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 KRR1Q13601 381 aaKnown RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 GEN1Q17RS7 908 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 IQCA1Q86XH1 822 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 ATP6V0A4Q9HBG4 840 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 GIPC1O14908 333 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 KRT4P19013 534 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 INPP5BP32019 993 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 SUZ12Q15022 739 aaKnown RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 INTS13Q9NVM9 706 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 AIPL1Q9NZN9 384 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 EMC3Q9P0I2 261 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 NOC2LQ9Y3T9 749 aaKnown RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 FGFR1OPO95684 399 aaKnown RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 PPFIA1Q13136 1202 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 KHDRBS2Q5VWX1 349 aaKnown RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 P3H3Q8IVL6 736 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 RASSF5Q8WWW0 418 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 NBPF3Q9H094 633 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 LZTFL1Q9NQ48 299 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 DBNLQ9UJU6 430 aaKnown RBP6.72□□□□□ -1.33
SCN2A-202ENST00000375427 MIS18AQ9NYP9 233 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 IFT81Q8WYA0 676 aa6.72□□□□□ -1.33
SCN2A-202ENST00000375427 TEKT1Q969V4 418 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms