RNA–Protein interactions for RNA: ENST00000374466.3

CSGALNACT2-201, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT2-201ENST00000374466 WDR90Q96KV7 1748 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 SEMA3EO15041 775 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 ITGA6P23229 1130 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 IFIT5Q13325 482 aaKnown RBP13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 KIF1BPQ96EK5 621 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 ARXQ96QS3 562 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 GREM2Q9H772 168 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 LAMB1P07942 1786 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 SALL1Q9NSC2 1324 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 NEFLP07196 543 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 GPTP24298 496 aa13.87□□□□□ -0.19
CSGALNACT2-201ENST00000374466 TTC41PQ6P2S7 1318 aa13.86□□□□□ -0.19
CSGALNACT2-201ENST00000374466 PDGFDQ9GZP0 370 aaPredicted RBP13.86□□□□□ -0.19
CSGALNACT2-201ENST00000374466 RPS8P62241 208 aaKnown RBP13.85□□□□□ -0.19
CSGALNACT2-201ENST00000374466 AKAP2Q9Y2D5 859 aa13.85□□□□□ -0.19
CSGALNACT2-201ENST00000374466 ADAMTSL1Q8N6G6 1762 aa13.85□□□□□ -0.19
CSGALNACT2-201ENST00000374466 CCDC88AQ3V6T2 1871 aa13.85□□□□□ -0.19
CSGALNACT2-201ENST00000374466 H0YIN7 160 aa13.85□□□□□ -0.19
CSGALNACT2-201ENST00000374466 SASH1O94885 1247 aa13.85□□□□□ -0.19
CSGALNACT2-201ENST00000374466 AK9Q5TCS8 1911 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 ATP2B4P23634 1241 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 CCDC57Q2TAC2 916 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 IGHDP01880 384 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 FAM161AQ3B820 660 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 DDX46Q7L014 1031 aaKnown RBP13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 ANKRD18AQ8IVF6 992 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 XDHP47989 1333 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 SRGAP3O43295 1099 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 ARID4AP29374 1257 aaPredicted RBP13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 SMIM5Q71RC9 77 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 SUPT20HQ8NEM7 779 aa13.84□□□□□ -0.19
CSGALNACT2-201ENST00000374466 MINPP1Q9UNW1 487 aa13.83□□□□□ -0.2
CSGALNACT2-201ENST00000374466 PDE8BO95263 885 aa13.83□□□□□ -0.2
CSGALNACT2-201ENST00000374466 RTKN2Q8IZC4 609 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 SYNE4Q8N205 404 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 IGHMBP2P38935 993 aaKnown RBP13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 NUTM1Q86Y26 1132 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 C2CD5Q86YS7 1000 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 SNRKQ9NRH2 765 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 PPEF1O14829 653 aaPredicted RBP13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 IL1R1P14778 569 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 FBXO33Q7Z6M2 555 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 TAOK2Q9UL54 1235 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 LAMA4Q16363 1823 aa13.82□□□□□ -0.2
CSGALNACT2-201ENST00000374466 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 LPIN2Q92539 896 aa13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 MRIQ9BWK5 157 aa13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 SUGT1Q9Y2Z0 365 aa13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 SCN4AP35499 1836 aa13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 FAM205AQ6ZU69 1335 aa13.81□□□□□ -0.2
CSGALNACT2-201ENST00000374466 LRRCC1Q9C099 1032 aa13.8□□□□□ -0.2
CSGALNACT2-201ENST00000374466 COL2A1P02458 1487 aaPredicted RBP13.8□□□□□ -0.2
CSGALNACT2-201ENST00000374466 EPB41L2O43491 1005 aaKnown RBP13.8□□□□□ -0.2
CSGALNACT2-201ENST00000374466 TTLL6Q8N841 843 aa13.8□□□□□ -0.2
CSGALNACT2-201ENST00000374466 PIM2Q9P1W9 311 aa13.8□□□□□ -0.2
CSGALNACT2-201ENST00000374466 CELF1Q92879 486 aaKnown RBP13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 COL4A5P29400 1685 aa13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 TNNI3KQ59H18 835 aa13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 FPGT-TNNI3KV9GXZ4 949 aa13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 PAPPA2Q9BXP8 1791 aa13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 MAP4K4O95819 1239 aaPredicted RBP13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 CHD1LQ86WJ1 897 aa13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 CDK5RAP2Q96SN8 1893 aa13.79□□□□□ -0.2
CSGALNACT2-201ENST00000374466 ATP5JP18859 108 aa13.78□□□□□ -0.2
CSGALNACT2-201ENST00000374466 FKBP4Q02790 459 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSGALNACT2-201ENST00000374466 DPEP1P16444 411 aa13.78□□□□□ -0.2
CSGALNACT2-201ENST00000374466 CHRNDQ07001 517 aa13.78□□□□□ -0.2
CSGALNACT2-201ENST00000374466 G3BP1Q13283 466 aaKnown RBP eCLIP13.78□□□□□ -0.2
CSGALNACT2-201ENST00000374466 PRPF40BQ6NWY9 871 aaKnown RBP13.78□□□□□ -0.2
CSGALNACT2-201ENST00000374466 CCDC93Q567U6 631 aa13.77□□□□□ -0.2
CSGALNACT2-201ENST00000374466 SEC31BQ9NQW1 1179 aa13.77□□□□□ -0.2
CSGALNACT2-201ENST00000374466 ZNF330Q9Y3S2 320 aaPredicted RBP13.77□□□□□ -0.2
CSGALNACT2-201ENST00000374466 IL17RAQ96F46 866 aa13.77□□□□□ -0.21
CSGALNACT2-201ENST00000374466 CHD4Q14839 1912 aa13.77□□□□□ -0.21
CSGALNACT2-201ENST00000374466 ZBTB7AO95365 584 aa13.76□□□□□ -0.21
CSGALNACT2-201ENST00000374466 COL1A1P02452 1464 aaPredicted RBP13.76□□□□□ -0.21
CSGALNACT2-201ENST00000374466 UQCRFS1P1P0C7P4 283 aa13.76□□□□□ -0.21
CSGALNACT2-201ENST00000374466 IL27Q8NEV9 243 aa13.76□□□□□ -0.21
CSGALNACT2-201ENST00000374466 TDRD7Q8NHU6 1098 aaKnown RBP13.76□□□□□ -0.21
CSGALNACT2-201ENST00000374466 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
CSGALNACT2-201ENST00000374466 SCN9AQ15858 1988 aa13.76□□□□□ -0.21
CSGALNACT2-201ENST00000374466 KIAA2012Q0VF49 1180 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 LRRC24Q50LG9 513 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 LDHAL6AQ6ZMR3 332 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 EYA3Q99504 573 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 COA1Q9GZY4 146 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 DALRD3Q5D0E6 543 aaKnown RBP13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 MSL1Q68DK7 614 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 BICDL1Q6ZP65 573 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 TBC1D16Q8TBP0 767 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 GPSM2P81274 684 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 C1orf115Q9H7X2 142 aa13.75□□□□□ -0.21
CSGALNACT2-201ENST00000374466 CEP126Q9P2H0 1117 aa13.74□□□□□ -0.21
CSGALNACT2-201ENST00000374466 SLC5A1P13866 664 aa13.74□□□□□ -0.21
CSGALNACT2-201ENST00000374466 SURF6O75683 361 aaKnown RBP13.74□□□□□ -0.21
CSGALNACT2-201ENST00000374466 GTF2E1P29083 439 aaPredicted RBP13.74□□□□□ -0.21
CSGALNACT2-201ENST00000374466 PLEKHM2Q8IWE5 1019 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms