RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 CETN1Q12798 172 aa22.58■■□□□ 1.21
LMO4-202ENST00000370544 NYXQ9GZU5 481 aa22.58■■□□□ 1.21
LMO4-202ENST00000370544 TCERG1LQ5VWI1 586 aa22.58■■□□□ 1.2
LMO4-202ENST00000370544 STXBP4Q6ZWJ1 553 aa22.58■■□□□ 1.2
LMO4-202ENST00000370544 GOLGA6L7A0A1B0GV03 622 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 GIMAP6Q6P9H5 292 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 KCNG4Q8TDN1 519 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 IP6K1Q92551 441 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 NCKAP5LQ9HCH0 1330 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 BMP15O95972 392 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 C8orf34Q49A92 452 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 ZBTB40Q9NUA8 1239 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 RNF113AO15541 343 aaKnown RBP22.57■■□□□ 1.2
LMO4-202ENST00000370544 MAP9Q49MG5 647 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 ZNF804AQ7Z570 1209 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 LUZP1Q86V48 1076 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 SNX21Q969T3 373 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 C16orf45Q96MC5 204 aaPredicted RBP22.57■■□□□ 1.2
LMO4-202ENST00000370544 MAP3K19Q56UN5 1328 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 DNMT1P26358 1616 aaKnown RBP22.57■■□□□ 1.2
LMO4-202ENST00000370544 DNA2P51530 1060 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 C8orf37Q96NL8 207 aa22.57■■□□□ 1.2
LMO4-202ENST00000370544 COL17A1Q9UMD9 1497 aaPredicted RBP22.57■■□□□ 1.2
LMO4-202ENST00000370544 KCNA6P17658 529 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 PCDH11XQ9BZA7 1347 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 PCDH11YQ9BZA8 1340 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 UBAP1LF5GYI3 381 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 RMND1Q9NWS8 449 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 MAGEB6P1A0A0J9YX57 407 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 TMX1Q9H3N1 280 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 PRC1O43663 620 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 MCM3P25205 808 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 TFCP2Q12800 502 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 LRSAM1Q6UWE0 723 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 MAST1Q9Y2H9 1570 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 SOS1Q07889 1333 aaPredicted RBP22.56■■□□□ 1.2
LMO4-202ENST00000370544 IRS4O14654 1257 aaPredicted RBP22.56■■□□□ 1.2
LMO4-202ENST00000370544 EXOC1Q9NV70 894 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 SAMM50Q9Y512 469 aa22.56■■□□□ 1.2
LMO4-202ENST00000370544 PAFAH1B1P43034 410 aa22.55■■□□□ 1.2
LMO4-202ENST00000370544 F8W031 263 aaPredicted RBP22.55■■□□□ 1.2
LMO4-202ENST00000370544 TRMT1LQ7Z2T5 733 aaKnown RBP22.55■■□□□ 1.2
LMO4-202ENST00000370544 HCLS1P14317 486 aaPredicted RBP22.55■■□□□ 1.2
LMO4-202ENST00000370544 USP48Q86UV5 1035 aa22.55■■□□□ 1.2
LMO4-202ENST00000370544 ALS2CR12Q96Q35 445 aa22.55■■□□□ 1.2
LMO4-202ENST00000370544 PZPP20742 1482 aa22.54■■□□□ 1.2
LMO4-202ENST00000370544 ABCC2Q92887 1545 aa22.54■■□□□ 1.2
LMO4-202ENST00000370544 F13A1P00488 732 aa22.54■■□□□ 1.2
LMO4-202ENST00000370544 GNAQP50148 359 aa22.54■■□□□ 1.2
LMO4-202ENST00000370544 PPP4R3BQ5MIZ7 849 aa22.54■■□□□ 1.2
LMO4-202ENST00000370544 HEATR3Q7Z4Q2 680 aa22.54■■□□□ 1.2
LMO4-202ENST00000370544 GNAT2P19087 354 aa22.54■■□□□ 1.2
LMO4-202ENST00000370544 SYCP3Q8IZU3 236 aa22.53■■□□□ 1.2
LMO4-202ENST00000370544 MRPS27Q92552 414 aaKnown RBP22.53■■□□□ 1.2
LMO4-202ENST00000370544 TRIM47Q96LD4 638 aa22.53■■□□□ 1.2
LMO4-202ENST00000370544 PICALMQ13492 652 aa22.53■■□□□ 1.2
LMO4-202ENST00000370544 BICC1Q9H694 974 aaKnown RBP22.53■■□□□ 1.2
LMO4-202ENST00000370544 TBCAO75347 108 aaKnown RBP22.53■■□□□ 1.2
LMO4-202ENST00000370544 ERMNQ8TAM6 284 aa22.52■■□□□ 1.2
LMO4-202ENST00000370544 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
LMO4-202ENST00000370544 PLEKHM2Q8IWE5 1019 aa22.52■■□□□ 1.2
LMO4-202ENST00000370544 GOLGA6L9A6NEM1 432 aa22.52■■□□□ 1.2
LMO4-202ENST00000370544 EZRP15311 586 aaKnown RBP22.52■■□□□ 1.2
LMO4-202ENST00000370544 RRAGBQ5VZM2 374 aa22.52■■□□□ 1.2
LMO4-202ENST00000370544 STAT6P42226 847 aa22.52■■□□□ 1.2
LMO4-202ENST00000370544 TPTE2Q6XPS3 522 aa22.52■■□□□ 1.2
LMO4-202ENST00000370544 AFMP43652 599 aa22.52■■□□□ 1.19
LMO4-202ENST00000370544 TBX22Q9Y458 520 aa22.52■■□□□ 1.19
LMO4-202ENST00000370544 CREB3L3Q68CJ9 461 aa22.51■■□□□ 1.19
LMO4-202ENST00000370544 HDAC9Q9UKV0 1011 aa22.51■■□□□ 1.19
LMO4-202ENST00000370544 UHRF1BP1Q6BDS2 1440 aa22.51■■□□□ 1.19
LMO4-202ENST00000370544 N4BP3O15049 544 aa22.51■■□□□ 1.19
LMO4-202ENST00000370544 SMC5Q8IY18 1101 aa22.51■■□□□ 1.19
LMO4-202ENST00000370544 RTL9Q8NET4 1388 aa22.51■■□□□ 1.19
LMO4-202ENST00000370544 PER1O15534 1290 aaPredicted RBP22.5■■□□□ 1.19
LMO4-202ENST00000370544 USP8P40818 1118 aa22.5■■□□□ 1.19
LMO4-202ENST00000370544 MAGEB6Q8N7X4 407 aa22.5■■□□□ 1.19
LMO4-202ENST00000370544 SNW1Q13573 536 aaKnown RBP22.5■■□□□ 1.19
LMO4-202ENST00000370544 HELBQ8NG08 1087 aaPredicted RBP22.5■■□□□ 1.19
LMO4-202ENST00000370544 ANO6Q4KMQ2 910 aa22.5■■□□□ 1.19
LMO4-202ENST00000370544 RTCBQ9Y3I0 505 aaKnown RBP22.5■■□□□ 1.19
LMO4-202ENST00000370544 AK2P54819 239 aa22.5■■□□□ 1.19
LMO4-202ENST00000370544 RAD50Q92878 1312 aa22.5■■□□□ 1.19
LMO4-202ENST00000370544 DNM1Q05193 864 aaKnown RBP22.49■■□□□ 1.19
LMO4-202ENST00000370544 CTNNBL1Q8WYA6 563 aaPredicted RBP22.49■■□□□ 1.19
LMO4-202ENST00000370544 EDC4Q6P2E9 1401 aaKnown RBP22.49■■□□□ 1.19
LMO4-202ENST00000370544 CALM1P0DP23 149 aa22.49■■□□□ 1.19
LMO4-202ENST00000370544 CALM2P0DP24 149 aa22.49■■□□□ 1.19
LMO4-202ENST00000370544 CALM3P0DP25 149 aa22.49■■□□□ 1.19
LMO4-202ENST00000370544 TRAF1Q13077 416 aa22.49■■□□□ 1.19
LMO4-202ENST00000370544 NAPAP54920 295 aa22.49■■□□□ 1.19
LMO4-202ENST00000370544 DDX21Q9NR30 783 aaKnown RBP eCLIP22.49■■□□□ 1.19
LMO4-202ENST00000370544 CGNQ9P2M7 1197 aaKnown RBP22.49■■□□□ 1.19
LMO4-202ENST00000370544 MARCKSP29966 332 aaPredicted RBP22.48■■□□□ 1.19
LMO4-202ENST00000370544 SBNO1A3KN83 1393 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 MIGA1Q8NAN2 632 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 CHMLP26374 656 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 CCDC113Q9H0I3 377 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 GOPCQ9HD26 462 aa22.48■■□□□ 1.19
LMO4-202ENST00000370544 RRP9O43818 475 aaKnown RBP22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms