RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 BRD1O95696 1058 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 NBPF20Q3BBV1 942 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 HDGFL1Q5TGJ6 251 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 MSL1Q68DK7 614 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 EXOC8Q8IYI6 725 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 NAP1L5Q96NT1 182 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 KRTAP4-11Q9BYQ6 195 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 RAPGEFL1Q9UHV5 662 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 ADAMTS8Q9UP79 889 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 PIK3R4Q99570 1358 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 MAFGO15525 162 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 SMARCA5O60264 1052 aaPredicted RBP4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 NOL8Q76FK4 1167 aaKnown RBP4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 ADAMTS19Q8TE59 1207 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 DRC1Q96MC2 740 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 MCOLN1Q9GZU1 580 aa4.78□□□□□ -1.64
ECHDC1-205ENST00000368295 KCPQ6ZWJ8 1503 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 ARHGAP31Q2M1Z3 1444 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 SLFNL1Q499Z3 407 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 RNF20Q5VTR2 975 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 VASH1Q7L8A9 365 aaPredicted RBP4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 SMC1BQ8NDV3 1235 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 MRGPRX2Q96LB1 330 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 PLCD4Q9BRC7 762 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 PHRF1Q9P1Y6 1649 aaKnown RBP4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 DUOX2Q9NRD8 1548 aa4.77□□□□□ -1.65
ECHDC1-205ENST00000368295 CHRNA2Q15822 529 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 CDK15Q96Q40 435 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 CEP126Q9P2H0 1117 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 RIPOR2Q9Y4F9 1068 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 TLL2Q9Y6L7 1015 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 ABCA3Q99758 1704 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 CICQ96RK0 1608 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 CCNB3Q8WWL7 1395 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 LOC102724159A0A0B4J2E5 919 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 ESPNB1AK53 854 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 MSTNO14793 375 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 SIAH2O43255 324 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 ZEB1P37275 1124 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 LAMC2Q13753 1193 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 ARID5BQ14865 1188 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 PWP2Q15269 919 aaKnown RBP4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 HSP90AB4PQ58FF6 505 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 KRT28Q7Z3Y7 464 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 RNF135Q8IUD6 432 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 NFATC2IPQ8NCF5 419 aa4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 KCTD15Q96SI1 283 aaPredicted RBP4.76□□□□□ -1.65
ECHDC1-205ENST00000368295 ROBO2Q9HCK4 1378 aa4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 UNCXA6NJT0 531 aa4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 ADH1CP00326 375 aa4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 IRX6P78412 446 aaPredicted RBP4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 MYH16Q9H6N6 1097 aa4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 COL6A3P12111 3177 aa4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 PNPLA7Q6ZV29 1317 aa4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 IGSF1Q8N6C5 1336 aa4.75□□□□□ -1.65
ECHDC1-205ENST00000368295 RBM47A0AV96 593 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 FSHRP23945 695 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 DHX9Q08211 1270 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 NR5A1Q13285 461 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 SND1Q7KZF4 910 aaKnown RBP eCLIP4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 WASF2Q9Y6W5 498 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 FYCO1Q9BQS8 1478 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 TNS3Q68CZ2 1445 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 TOPAZ1Q8N9V7 1692 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 RGPD3A6NKT7 1758 aaPredicted RBP4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 RGPD4Q7Z3J3 1758 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 MEGF6O75095 1541 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 ATP9BO43861 1147 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 ALDH1A1P00352 501 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 SKIP12755 728 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 IRS1P35568 1242 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 KCNQ4P56696 695 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 INTS6LQ5JSJ4 861 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 SREK1Q8WXA9 508 aaKnown RBP4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 HPS1Q92902 700 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 UCN2Q96RP3 112 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 CCDC141Q6ZP82 1450 aa4.74□□□□□ -1.65
ECHDC1-205ENST00000368295 GCC2Q8IWJ2 1684 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 A0A0U1RQG5 324 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 ANKRD62A6NC57 917 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 ANAPC15P60006 121 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 MAP7D1Q3KQU3 841 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 PPP1R12CQ9BZL4 782 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 DOLKQ9UPQ8 538 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 NRXN3Q9Y4C0 1643 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 CNTNAP1P78357 1384 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 HMGB1P1B2RPK0 211 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 J3QL48 77 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 PIK3CDO00329 1044 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 LZTS3O60299 673 aaPredicted RBP4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 RAB15P59190 212 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 LARP1Q6PKG0 1096 aaKnown RBP4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 SMIM5Q71RC9 77 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 PLEKHM2Q8IWE5 1019 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 PHTF2Q8N3S3 785 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 PLPP7Q8NBV4 271 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 CCDC136Q96JN2 1154 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 LRRC4BQ9NT99 713 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 PCDHB11Q9Y5F2 797 aa4.73□□□□□ -1.65
ECHDC1-205ENST00000368295 RRBP1Q9P2E9 1410 aaKnown RBP4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms