RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 PNISRQ8TF01 805 aaKnown RBP9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 BIN1O00499 593 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 HPDP32754 393 aaPredicted RBP9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 SPATS2LQ9NUQ6 558 aaKnown RBP9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 FYCO1Q9BQS8 1478 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 GPRASP1Q5JY77 1395 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 SRGAP3O43295 1099 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 PPFIA1Q13136 1202 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 SKILP12757 684 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 PLCB3Q01970 1234 aa9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 CRACR2BQ8N4Y2 399 aaPredicted RBP9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 PSPC1Q8WXF1 523 aaKnown RBP9.5□□□□□ -0.89
NCKAP1-202ENST00000361354 SYT1P21579 422 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 CCDC102BQ68D86 513 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 CCDC65Q8IXS2 484 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 ANKFY1Q9P2R3 1169 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 BMP15O95972 392 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 LCA5Q86VQ0 697 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 PALM3A6NDB9 673 aaPredicted RBP9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 SLC4A2P04920 1241 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 ATF7IPQ6VMQ6 1270 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 DHX57Q6P158 1386 aaKnown RBP9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 CLCN1P35523 988 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 TPX2Q9ULW0 747 aaKnown RBP9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 SYF2O95926 243 aaKnown RBP9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 CEP126Q9P2H0 1117 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 IDH1O75874 414 aaKnown RBP9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 IDEP14735 1019 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 SLF2Q8IX21 1173 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 STAT6P42226 847 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 PHLDB3Q6NSJ2 640 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 LARSQ9P2J5 1176 aaKnown RBP9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 LIMCH1Q9UPQ0 1083 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 CROCCP2Q86T23 111 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 CCDC26Q8TAB7 109 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 BANK1Q8NDB2 785 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 UTP11Q9Y3A2 253 aaKnown RBP9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 ITIH3Q06033 890 aa9.49□□□□□ -0.89
NCKAP1-202ENST00000361354 NLRP5P59047 1200 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 WDR70Q9NW82 654 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 OPHN1O60890 802 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 IFT81Q8WYA0 676 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 TNPO1Q92973 898 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 PSMA7O14818 248 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 ABCC8Q09428 1581 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 PHACTR2O75167 634 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 ATF3P18847 181 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 GLRX3O76003 335 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 POLR3DP05423 398 aaPredicted RBP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 TAF7Q15545 349 aaPredicted RBP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 PRPF40BQ6NWY9 871 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 SDCCAG3Q96C92 435 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 SPECC1L-ADORA2AF8WAN1 911 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 SYKP43405 635 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 PAXIP1Q6ZW49 1069 aaPredicted RBP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 TERF1P54274 439 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 PHEXP78562 749 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 GOLGA6CA6NDK9 693 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 GOLGA6DP0CG33 693 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 HNRNPMP52272 730 aaKnown RBP eCLIP9.48□□□□□ -0.893e-6■■■■□ 21.5
NCKAP1-202ENST00000361354 NOLC1Q14978 699 aaKnown RBP eCLIP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 PLCB1Q9NQ66 1216 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 GOLGA6AQ9NYA3 693 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 HMGB2P26583 209 aaKnown RBP9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 RAP1GDS1P52306 607 aa9.48□□□□□ -0.89
NCKAP1-202ENST00000361354 ATICP31939 592 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 HSP90AA5PQ58FG0 334 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 FAM200AQ8TCP9 573 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 KRT3P12035 628 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 KIF1BPQ96EK5 621 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 ACTN4O43707 911 aaKnown RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 CCDC117Q8IWD4 279 aaPredicted RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 MX1P20591 662 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 STK10O94804 968 aaKnown RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 VPS41P49754 854 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 ZSCAN16Q9H4T2 348 aaPredicted RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 SLC8A1P32418 973 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 HAUS2Q9NVX0 235 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 UAP1Q16222 522 aaPredicted RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 GJC1P36383 396 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 GTF3C6Q969F1 213 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 ZSCAN23Q3MJ62 389 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 BICDL1Q6ZP65 573 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 SPINK5Q9NQ38 1064 aaPredicted RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 DHX29Q7Z478 1369 aaKnown RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 RANBP6O60518 1105 aaKnown RBP9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 ZNF428Q96B54 188 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 TMEM57Q8N5G2 664 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 ATP6V1AP38606 617 aa9.47□□□□□ -0.89
NCKAP1-202ENST00000361354 TMEM110-MUSTN1A8MSY1 372 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 E7EVH7 732 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 CCDC42Q96M95 316 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 PPP1R9AQ9ULJ8 1098 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 ATP2A3Q93084 1043 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 MRPL46Q9H2W6 279 aaKnown RBP9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 RBM42Q9BTD8 480 aaKnown RBP9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 DRC3Q9H069 523 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 MMRN2Q9H8L6 949 aa9.46□□□□□ -0.89
NCKAP1-202ENST00000361354 PPP1R1BQ9UD71 204 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms