RNA–Protein interactions for RNA: ENST00000361283.2

CHAMP1-201, Transcript of chromosome alignment maintaining phosphoprotein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHAMP1, Length 3,795 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1-201ENST00000361283 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
CHAMP1-201ENST00000361283 UBR3Q6ZT12 1888 aa13.82□□□□□ -0.2
CHAMP1-201ENST00000361283 GNPATO15228 680 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 PDE8BO95263 885 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 ATP2B3Q16720 1220 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 KRT27Q7Z3Y8 459 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 MAP4K1Q92918 833 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 CCDC85AQ96PX6 553 aaPredicted RBP13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 A0A1B0GUL6 1792 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 FAM227BQ96M60 508 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 A0A0D9SFI3 127 aa13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 HCLS1P14317 486 aaPredicted RBP13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 SLKQ9H2G2 1235 aaPredicted RBP13.81□□□□□ -0.2
CHAMP1-201ENST00000361283 FGFR2P21802 821 aa13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 NECTIN1Q15223 517 aa13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 LRRFIP1Q32MZ4 808 aaKnown RBP13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 DNAJC2Q99543 621 aaKnown RBP13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 ZPR1O75312 459 aa13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 KCNQ4P56696 695 aa13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 PUM3Q15397 648 aaKnown RBP13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 TM6SF1Q9BZW5 370 aa13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 HELLSQ9NRZ9 838 aa13.8□□□□□ -0.2
CHAMP1-201ENST00000361283 TTC39AQ5SRH9 613 aa13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 USPL1Q5W0Q7 1092 aa13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 TBC1D9BQ66K14 1250 aa13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 AKAP11Q9UKA4 1901 aa13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 PTH1RQ03431 593 aa13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 LPIN2Q92539 896 aa13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 EDC3Q96F86 508 aaKnown RBP13.79□□□□□ -0.2
CHAMP1-201ENST00000361283 ADORA1P30542 326 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 NEK4P51957 841 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 NFKBIBQ15653 356 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 MCMDC2Q4G0Z9 681 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 MYH7P12883 1935 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 SSFA2P28290 1259 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 IGHMBP2P38935 993 aaKnown RBP13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 ERFEQ4G0M1 354 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 GORABQ5T7V8 394 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 ARID4AP29374 1257 aaPredicted RBP13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 SETDB2Q96T68 719 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
CHAMP1-201ENST00000361283 GOLIM4O00461 696 aa13.77□□□□□ -0.2
CHAMP1-201ENST00000361283 TAF5LO75529 589 aa13.77□□□□□ -0.2
CHAMP1-201ENST00000361283 ZFYP08048 801 aaPredicted RBP13.77□□□□□ -0.2
CHAMP1-201ENST00000361283 TRAPPC3LQ5T215 181 aa13.77□□□□□ -0.2
CHAMP1-201ENST00000361283 MPHOSPH8Q99549 860 aa13.77□□□□□ -0.2
CHAMP1-201ENST00000361283 UQCRFS1P1P0C7P4 283 aa13.77□□□□□ -0.21
CHAMP1-201ENST00000361283 ZMYM1Q5SVZ6 1142 aa13.77□□□□□ -0.21
CHAMP1-201ENST00000361283 CWC22Q9HCG8 908 aaKnown RBP13.77□□□□□ -0.21
CHAMP1-201ENST00000361283 LRRC4BQ9NT99 713 aa13.77□□□□□ -0.21
CHAMP1-201ENST00000361283 RBM8AQ9Y5S9 174 aaKnown RBP13.77□□□□□ -0.21
CHAMP1-201ENST00000361283 RGPD3A6NKT7 1758 aaPredicted RBP13.77□□□□□ -0.21
CHAMP1-201ENST00000361283 RGPD4Q7Z3J3 1758 aa13.77□□□□□ -0.21
CHAMP1-201ENST00000361283 RNF20Q5VTR2 975 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 RPAP1Q9BWH6 1393 aaPredicted RBP13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 FAM177BA6PVY3 158 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 RNF113AO15541 343 aaKnown RBP13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 ZKSCAN1P17029 563 aaPredicted RBP13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 ZNF589Q86UQ0 364 aaPredicted RBP13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 RASEFQ8IZ41 740 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 TTC14Q96N46 770 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 SEC31BQ9NQW1 1179 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 SRP68Q9UHB9 627 aaKnown RBP13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 CARMIL3Q8ND23 1372 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 DOCK2Q92608 1830 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 HSP90AA1P07900 732 aaKnown RBP13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 SLC5A1P13866 664 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 CUL4AQ13619 759 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 CREB3L3Q68CJ9 461 aa13.76□□□□□ -0.21
CHAMP1-201ENST00000361283 RFC4P35249 363 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 NBR1Q14596 966 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 TTF1Q15361 905 aaPredicted RBP13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 TPTE2Q6XPS3 522 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 AMIGO3Q86WK7 504 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 NDUFB9Q9Y6M9 179 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 ZSWIM6Q9HCJ5 1215 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 U3KPZ7 1027 aaPredicted RBP13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 COL4A1P02462 1669 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 PRPF40BQ6NWY9 871 aaKnown RBP13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 SPRYD3Q8NCJ5 442 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 INTS4Q96HW7 963 aaKnown RBP13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 DSCC1Q9BVC3 393 aa13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 BSDC1Q9NW68 430 aaPredicted RBP13.75□□□□□ -0.21
CHAMP1-201ENST00000361283 SLC27A2O14975 620 aa13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 NBPF5PQ86XG9 351 aaPredicted RBP13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 ALDH8A1Q9H2A2 487 aaPredicted RBP13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 ZBTB22O15209 634 aa13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 RAB3GAP1Q15042 981 aa13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 CCDC102BQ68D86 513 aa13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 ANKRD18AQ8IVF6 992 aa13.74□□□□□ -0.21
CHAMP1-201ENST00000361283 TMX3Q96JJ7 454 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms