RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 IL2RBP14784 551 aa18.31■□□□□ 0.52
TNFSF13-202ENST00000349228 TEX13AQ9BXU3 409 aaPredicted RBP18.31■□□□□ 0.52
TNFSF13-202ENST00000349228 TCHHQ07283 1943 aa18.31■□□□□ 0.52
TNFSF13-202ENST00000349228 CYP21A2P08686 494 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 TRIM28Q13263 835 aaKnown RBP18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 ZMYM1Q5SVZ6 1142 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 TTLL7Q6ZT98 887 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 Q6ZUG5 572 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 BRINP3Q76B58 766 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 DHX32Q7L7V1 743 aaKnown RBP18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 TTC6Q86TZ1 520 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 NEUROD6Q96NK8 337 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 TAF6LQ9Y6J9 622 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 KCPQ6ZWJ8 1503 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 TNS2Q63HR2 1409 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 GOLGA6L4A6NEF3 574 aa18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 HCLS1P14317 486 aaPredicted RBP18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 DDX19AQ9NUU7 478 aaKnown RBP18.3■□□□□ 0.52
TNFSF13-202ENST00000349228 TPM3P06753 285 aa18.29■□□□□ 0.52
TNFSF13-202ENST00000349228 CNKSR2Q8WXI2 1034 aa18.29■□□□□ 0.52
TNFSF13-202ENST00000349228 TCEANC2Q96MN5 208 aa18.29■□□□□ 0.52
TNFSF13-202ENST00000349228 AKAP2Q9Y2D5 859 aa18.29■□□□□ 0.52
TNFSF13-202ENST00000349228 SOS2Q07890 1332 aaPredicted RBP18.29■□□□□ 0.52
TNFSF13-202ENST00000349228 PFKFB2O60825 505 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 A1BGP04217 495 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 HMGN5P82970 282 aaKnown RBP18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 SPATA32Q96LK8 384 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 ISCA1Q9BUE6 129 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 RNF113AO15541 343 aaKnown RBP18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 ADCY5O95622 1261 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 KIAA2012Q0VF49 1180 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 MAP3K11Q16584 847 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 GIMAP6Q6P9H5 292 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 SMARCC2Q8TAQ2 1214 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 AGXT2Q9BYV1 514 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 NUP62CLQ9H1M0 184 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 CEP126Q9P2H0 1117 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 CFAP45Q9UL16 551 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 SPEF2Q9C093 1822 aa18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 COL5A2P05997 1499 aaPredicted RBP18.28■□□□□ 0.52
TNFSF13-202ENST00000349228 PAPPAQ13219 1627 aa18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 GOLIM4O00461 696 aa18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 IFIT1P09914 478 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 HSP90B1P14625 803 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 ATL3Q6DD88 541 aa18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 CCDC129Q6ZRS4 1044 aa18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 SEC62Q99442 399 aaKnown RBP18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 USP25Q9UHP3 1055 aa18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 NUP188Q5SRE5 1749 aa18.27■□□□□ 0.52
TNFSF13-202ENST00000349228 ZFYP08048 801 aaPredicted RBP18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 STK3Q13188 491 aa18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 TCIRG1Q13488 830 aa18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 NAA16Q6N069 864 aaPredicted RBP18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 FERMT3Q86UX7 667 aa18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 VSIG10Q8N0Z9 540 aa18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 FBXL16Q8N461 479 aa18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 LEO1Q8WVC0 666 aaPredicted RBP18.27■□□□□ 0.51
TNFSF13-202ENST00000349228 H3BQV1 296 aa18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 RRP9O43818 475 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 TIMM10P62072 90 aa18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 EXOSC10Q01780 885 aaKnown RBP18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 COL9A3Q14050 684 aaPredicted RBP18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 PLA2G12BQ9BX93 195 aa18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 CTNNA3Q9UI47 895 aa18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 ABCC12Q96J65 1359 aa18.26■□□□□ 0.51
TNFSF13-202ENST00000349228 A0A1B0GUL7 405 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 RESTQ13127 1097 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 CCDC57Q2TAC2 916 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 CCDC158Q5M9N0 1113 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 ZBTB3Q9H5J0 574 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 CAVIN2O95810 425 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 BRF1Q92994 677 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 ZNF274Q96GC6 653 aaPredicted RBP18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 NDUFB9Q9Y6M9 179 aa18.25■□□□□ 0.51
TNFSF13-202ENST00000349228 PCCAP05165 728 aaPredicted RBP18.24■□□□□ 0.51
TNFSF13-202ENST00000349228 RBM43Q6ZSC3 357 aaKnown RBP18.24■□□□□ 0.51
TNFSF13-202ENST00000349228 FAM200AQ8TCP9 573 aa18.24■□□□□ 0.51
TNFSF13-202ENST00000349228 HSPD1P10809 573 aaKnown RBP18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 LRRC24Q50LG9 513 aa18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 TNMDQ9H2S6 317 aa18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 TJP1Q07157 1748 aa18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 GOLGA6L6A8MZA4 724 aa18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 SCRN1Q12765 414 aa18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 STOX1Q6ZVD7 989 aa18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 CLSTN2Q9H4D0 955 aa18.23■□□□□ 0.51
TNFSF13-202ENST00000349228 JAK2O60674 1132 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 LIG1P18858 919 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 KIF6Q6ZMV9 814 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 TMOD3Q9NYL9 352 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 E7EWF7 191 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 CSF1RP07333 972 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 EVA1CP58658 441 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 NSUN7Q8NE18 718 aaKnown RBP18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 PIBF1Q8WXW3 757 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 DACT1Q9NYF0 836 aa18.22■□□□□ 0.51
TNFSF13-202ENST00000349228 SLAIN2Q9P270 581 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms