RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 MUC3AQ02505 3323 aa15.94■□□□□ 0.14
ATXN3-201ENST00000340660 HIRAP54198 1017 aaPredicted RBP15.93■□□□□ 0.14
ATXN3-201ENST00000340660 NBR1Q14596 966 aa15.93■□□□□ 0.14
ATXN3-201ENST00000340660 TBC1D9BQ66K14 1250 aa15.93■□□□□ 0.14
ATXN3-201ENST00000340660 RTKN2Q8IZC4 609 aa15.93■□□□□ 0.14
ATXN3-201ENST00000340660 GBA2Q9HCG7 927 aaPredicted RBP15.93■□□□□ 0.14
ATXN3-201ENST00000340660 TSHZ2Q9NRE2 1034 aa15.93■□□□□ 0.14
ATXN3-201ENST00000340660 SNED1Q8TER0 1413 aa15.93■□□□□ 0.14
ATXN3-201ENST00000340660 LAMB4A4D0S4 1761 aa15.92■□□□□ 0.14
ATXN3-201ENST00000340660 TMC1Q8TDI8 760 aa15.92■□□□□ 0.14
ATXN3-201ENST00000340660 TONSLQ96HA7 1378 aa15.91■□□□□ 0.14
ATXN3-201ENST00000340660 NOM1Q5C9Z4 860 aaKnown RBP15.91■□□□□ 0.14
ATXN3-201ENST00000340660 USP48Q86UV5 1035 aa15.91■□□□□ 0.14
ATXN3-201ENST00000340660 DNAJC10Q8IXB1 793 aa15.91■□□□□ 0.14
ATXN3-201ENST00000340660 FAM122AQ96E09 287 aa15.91■□□□□ 0.14
ATXN3-201ENST00000340660 THSD4Q6ZMP0 1018 aa15.9■□□□□ 0.14
ATXN3-201ENST00000340660 ZC3H15Q8WU90 426 aaKnown RBP15.9■□□□□ 0.14
ATXN3-201ENST00000340660 PLA2G2EQ9NZK7 142 aa15.9■□□□□ 0.14
ATXN3-201ENST00000340660 CACNA1AO00555 2505 aa15.89■□□□□ 0.13
ATXN3-201ENST00000340660 WNT2BQ93097 391 aa15.89■□□□□ 0.13
ATXN3-201ENST00000340660 ZBTB1Q9Y2K1 713 aa15.89■□□□□ 0.13
ATXN3-201ENST00000340660 TTC28Q96AY4 2481 aa15.89■□□□□ 0.13
ATXN3-201ENST00000340660 GOLGA8CPA6NN73 597 aa15.88■□□□□ 0.13
ATXN3-201ENST00000340660 FKTNO75072 461 aa15.88■□□□□ 0.13
ATXN3-201ENST00000340660 PTPN5P54829 565 aa15.88■□□□□ 0.13
ATXN3-201ENST00000340660 TSR1Q2NL82 804 aaKnown RBP15.88■□□□□ 0.13
ATXN3-201ENST00000340660 Q7L0L9 218 aa15.88■□□□□ 0.13
ATXN3-201ENST00000340660 RASAL3Q86YV0 1011 aa15.88■□□□□ 0.13
ATXN3-201ENST00000340660 C2orf69Q8N8R5 385 aa15.88■□□□□ 0.13
ATXN3-201ENST00000340660 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
ATXN3-201ENST00000340660 DEFB123Q8N688 67 aa15.87■□□□□ 0.13
ATXN3-201ENST00000340660 TRPM4Q8TD43 1214 aa15.87■□□□□ 0.13
ATXN3-201ENST00000340660 ARMC5Q96C12 935 aa15.87■□□□□ 0.13
ATXN3-201ENST00000340660 PSMD1Q99460 953 aa15.87■□□□□ 0.13
ATXN3-201ENST00000340660 R3HDMLQ9H3Y0 253 aa15.87■□□□□ 0.13
ATXN3-201ENST00000340660 FLT4P35916 1363 aa15.87■□□□□ 0.13
ATXN3-201ENST00000340660 CYP19A1P11511 503 aaPredicted RBP15.86■□□□□ 0.13
ATXN3-201ENST00000340660 CABP4P57796 275 aa15.86■□□□□ 0.13
ATXN3-201ENST00000340660 CNBD1Q8NA66 436 aa15.86■□□□□ 0.13
ATXN3-201ENST00000340660 SNX27Q96L92 541 aa15.86■□□□□ 0.13
ATXN3-201ENST00000340660 KIAA1468Q9P260 1216 aa15.86■□□□□ 0.13
ATXN3-201ENST00000340660 TRIM17Q9Y577 477 aa15.86■□□□□ 0.13
ATXN3-201ENST00000340660 MAP3K7O43318 606 aa15.85■□□□□ 0.13
ATXN3-201ENST00000340660 OTOP1Q7RTM1 612 aa15.85■□□□□ 0.13
ATXN3-201ENST00000340660 TERF2IPQ9NYB0 399 aa15.85■□□□□ 0.13
ATXN3-201ENST00000340660 EYSQ5T1H1 3165 aa15.85■□□□□ 0.13
ATXN3-201ENST00000340660 TRIM6-TRIM34B2RNG4 842 aa15.84■□□□□ 0.13
ATXN3-201ENST00000340660 NPR1P16066 1061 aa15.84■□□□□ 0.13
ATXN3-201ENST00000340660 A0A1W2PPC1 479 aa15.83■□□□□ 0.12
ATXN3-201ENST00000340660 GMPSP49915 693 aaPredicted RBP15.83■□□□□ 0.12
ATXN3-201ENST00000340660 ST5P78524 1137 aa15.83■□□□□ 0.12
ATXN3-201ENST00000340660 GRXCR2A6NFK2 248 aa15.82■□□□□ 0.12
ATXN3-201ENST00000340660 LARGE2Q8N3Y3 721 aa15.82■□□□□ 0.12
ATXN3-201ENST00000340660 MTMR10Q9NXD2 777 aa15.82■□□□□ 0.12
ATXN3-201ENST00000340660 SHTN1A0MZ66 631 aa15.81■□□□□ 0.12
ATXN3-201ENST00000340660 MRC1P22897 1456 aa15.81■□□□□ 0.12
ATXN3-201ENST00000340660 SCN7AQ01118 1682 aa15.81■□□□□ 0.12
ATXN3-201ENST00000340660 LAPTM4BQ86VI4 370 aa15.81■□□□□ 0.12
ATXN3-201ENST00000340660 ADM5C9JUS6 153 aa15.8■□□□□ 0.12
ATXN3-201ENST00000340660 NFATC2IPQ8NCF5 419 aa15.8■□□□□ 0.12
ATXN3-201ENST00000340660 EYA1Q99502 592 aa15.8■□□□□ 0.12
ATXN3-201ENST00000340660 PTPN22Q9Y2R2 807 aa15.8■□□□□ 0.12
ATXN3-201ENST00000340660 KIF24Q5T7B8 1368 aa15.79■□□□□ 0.12
ATXN3-201ENST00000340660 NPC1L1Q9UHC9 1359 aa15.79■□□□□ 0.12
ATXN3-201ENST00000340660 NPHP1O15259 732 aa15.79■□□□□ 0.12
ATXN3-201ENST00000340660 KRT26Q7Z3Y9 468 aa15.79■□□□□ 0.12
ATXN3-201ENST00000340660 DPF3Q92784 378 aa15.79■□□□□ 0.12
ATXN3-201ENST00000340660 CFHR5Q9BXR6 569 aa15.79■□□□□ 0.12
ATXN3-201ENST00000340660 KLRG2A4D1S0 409 aaPredicted RBP15.78■□□□□ 0.12
ATXN3-201ENST00000340660 HSP90AB1P08238 724 aaKnown RBP15.78■□□□□ 0.12
ATXN3-201ENST00000340660 OSBPP22059 807 aa15.78■□□□□ 0.12
ATXN3-201ENST00000340660 CXCL9Q07325 125 aa15.78■□□□□ 0.12
ATXN3-201ENST00000340660 ZNF333Q96JL9 665 aa15.78■□□□□ 0.12
ATXN3-201ENST00000340660 SEPT9Q9UHD8 586 aaPredicted RBP15.78■□□□□ 0.12
ATXN3-201ENST00000340660 CANXP27824 592 aaKnown RBP15.77■□□□□ 0.12
ATXN3-201ENST00000340660 TM4SF4P48230 202 aa15.77■□□□□ 0.12
ATXN3-201ENST00000340660 SLC51AQ86UW1 340 aa15.77■□□□□ 0.12
ATXN3-201ENST00000340660 NIM1KQ8IY84 436 aa15.77■□□□□ 0.12
ATXN3-201ENST00000340660 LAMA2P24043 3122 aaKnown RBP15.77■□□□□ 0.11
ATXN3-201ENST00000340660 PRUNE2Q8WUY3 3088 aa15.76■□□□□ 0.11
ATXN3-201ENST00000340660 WTIPA6NIX2 430 aaPredicted RBP15.76■□□□□ 0.11
ATXN3-201ENST00000340660 EIF5P55010 431 aaKnown RBP15.76■□□□□ 0.11
ATXN3-201ENST00000340660 ANKK1Q8NFD2 765 aa15.76■□□□□ 0.11
ATXN3-201ENST00000340660 SETDB2Q96T68 719 aa15.76■□□□□ 0.11
ATXN3-201ENST00000340660 CDHR2Q9BYE9 1310 aa15.75■□□□□ 0.11
ATXN3-201ENST00000340660 ZFRQ96KR1 1074 aaKnown RBP15.75■□□□□ 0.11
ATXN3-201ENST00000340660 GGNBP2Q9H3C7 697 aa15.75■□□□□ 0.11
ATXN3-201ENST00000340660 KCNV2Q8TDN2 545 aa15.74■□□□□ 0.11
ATXN3-201ENST00000340660 EMILIN1Q9Y6C2 1016 aa15.74■□□□□ 0.11
ATXN3-201ENST00000340660 TBC1D2BQ9UPU7 963 aa15.73■□□□□ 0.11
ATXN3-201ENST00000340660 ZNF609O15014 1411 aa15.72■□□□□ 0.11
ATXN3-201ENST00000340660 A0A087WZG4 1122 aa15.72■□□□□ 0.11
ATXN3-201ENST00000340660 FYB1O15117 783 aa15.72■□□□□ 0.11
ATXN3-201ENST00000340660 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
ATXN3-201ENST00000340660 BCAMP50895 628 aa15.72■□□□□ 0.11
ATXN3-201ENST00000340660 SLC4A8Q2Y0W8 1093 aa15.72■□□□□ 0.11
ATXN3-201ENST00000340660 CDHR5Q9HBB8 845 aa15.72■□□□□ 0.11
ATXN3-201ENST00000340660 CNOT7Q9UIV1 285 aaKnown RBP15.72■□□□□ 0.11
ATXN3-201ENST00000340660 SOWAHBA6NEL2 793 aa15.71■□□□□ 0.11
ATXN3-201ENST00000340660 EGFRP00533 1210 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms