RNA–Protein interactions for RNA: ENST00000337221.8

SCARA3-202, Transcript of scavenger receptor class A member 3, humanhuman

TSL 1 (best) BASIC

Gene SCARA3, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARA3-202ENST00000337221 C4BP0C0L5 1744 aa33.88■■■■□ 3.01
SCARA3-202ENST00000337221 CCDC152Q4G0S7 254 aa33.87■■■■□ 3.01
SCARA3-202ENST00000337221 CCDC158Q5M9N0 1113 aa33.87■■■■□ 3.01
SCARA3-202ENST00000337221 GOLIM4O00461 696 aa33.86■■■■□ 3.01
SCARA3-202ENST00000337221 HSP90AA1P07900 732 aaKnown RBP33.86■■■■□ 3.01
SCARA3-202ENST00000337221 USPL1Q5W0Q7 1092 aa33.86■■■■□ 3.01
SCARA3-202ENST00000337221 RASEFQ8IZ41 740 aa33.86■■■■□ 3.01
SCARA3-202ENST00000337221 KCNB2Q92953 911 aa33.86■■■■□ 3.01
SCARA3-202ENST00000337221 RTCBQ9Y3I0 505 aaKnown RBP33.86■■■■□ 3.01
SCARA3-202ENST00000337221 TBC1D9BQ66K14 1250 aa33.85■■■■□ 3.01
SCARA3-202ENST00000337221 TICAM2Q86XR7 235 aa33.85■■■■□ 3.01
SCARA3-202ENST00000337221 MAP4K1Q92918 833 aa33.85■■■■□ 3.01
SCARA3-202ENST00000337221 PDE8BO95263 885 aa33.85■■■■□ 3.01
SCARA3-202ENST00000337221 GORABQ5T7V8 394 aa33.85■■■■□ 3.01
SCARA3-202ENST00000337221 AMIGO3Q86WK7 504 aa33.85■■■■□ 3.01
SCARA3-202ENST00000337221 SEC31BQ9NQW1 1179 aa33.85■■■■□ 3.01
SCARA3-202ENST00000337221 SRP68Q9UHB9 627 aaKnown RBP33.85■■■■□ 3.01
SCARA3-202ENST00000337221 ABCC12Q96J65 1359 aa33.84■■■■□ 3.01
SCARA3-202ENST00000337221 TTC39AQ5SRH9 613 aa33.84■■■■□ 3.01
SCARA3-202ENST00000337221 ZNF589Q86UQ0 364 aaPredicted RBP33.84■■■■□ 3.01
SCARA3-202ENST00000337221 COL24A1Q17RW2 1714 aa33.83■■■■□ 3.01
SCARA3-202ENST00000337221 NECTIN1Q15223 517 aa33.83■■■■□ 3.01
SCARA3-202ENST00000337221 IL27Q8NEV9 243 aa33.83■■■■□ 3.01
SCARA3-202ENST00000337221 CIZ1Q9ULV3 898 aaPredicted RBP33.83■■■■□ 3.01
SCARA3-202ENST00000337221 MROH5Q6ZUA9 1318 aa33.83■■■■□ 3.01
SCARA3-202ENST00000337221 MCM2P49736 904 aa33.83■■■■□ 3.01
SCARA3-202ENST00000337221 ERFEQ4G0M1 354 aa33.83■■■■□ 3.01
SCARA3-202ENST00000337221 FOXD4L1Q9NU39 408 aa33.83■■■■□ 3.01
SCARA3-202ENST00000337221 FRAT2O75474 233 aaPredicted RBP33.82■■■■□ 3
SCARA3-202ENST00000337221 CHGBP05060 677 aa33.82■■■■□ 3
SCARA3-202ENST00000337221 C4AP0C0L4 1744 aa33.81■■■■□ 3
SCARA3-202ENST00000337221 FAM196AQ6ZSG2 479 aa33.81■■■■□ 3
SCARA3-202ENST00000337221 KRT27Q7Z3Y8 459 aa33.81■■■■□ 3
SCARA3-202ENST00000337221 UPF3BQ9BZI7 483 aaKnown RBP33.81■■■■□ 3
SCARA3-202ENST00000337221 RBM8AQ9Y5S9 174 aaKnown RBP33.81■■■■□ 3
SCARA3-202ENST00000337221 CASZ1Q86V15 1759 aa33.81■■■■□ 3
SCARA3-202ENST00000337221 ZPR1O75312 459 aa33.81■■■■□ 3
SCARA3-202ENST00000337221 ARHGEF1Q92888 912 aaKnown RBP33.81■■■■□ 3
SCARA3-202ENST00000337221 PRPF40BQ6NWY9 871 aaKnown RBP33.8■■■■□ 3
SCARA3-202ENST00000337221 BICDL1Q6ZP65 573 aa33.8■■■■□ 3
SCARA3-202ENST00000337221 LRRC4BQ9NT99 713 aa33.8■■■■□ 3
SCARA3-202ENST00000337221 ARAP2Q8WZ64 1704 aa33.8■■■■□ 3
SCARA3-202ENST00000337221 TAF5LO75529 589 aa33.79■■■■□ 3
SCARA3-202ENST00000337221 FGFR2P21802 821 aa33.78■■■■□ 3
SCARA3-202ENST00000337221 SCARF1Q14162 830 aa33.78■■■■□ 3
SCARA3-202ENST00000337221 MPHOSPH8Q99549 860 aa33.78■■■■□ 3
SCARA3-202ENST00000337221 MCMDC2Q4G0Z9 681 aa33.77■■■■□ 3
SCARA3-202ENST00000337221 SLC10A5Q5PT55 438 aa33.77■■■■□ 3
SCARA3-202ENST00000337221 ZNF512BQ96KM6 892 aaPredicted RBP33.77■■■■□ 3
SCARA3-202ENST00000337221 AKAP11Q9UKA4 1901 aa33.77■■■■□ 3
SCARA3-202ENST00000337221 SF3B3Q15393 1217 aaKnown RBP33.77■■■■□ 3
SCARA3-202ENST00000337221 PUM3Q15397 648 aaKnown RBP33.77■■■■□ 3
SCARA3-202ENST00000337221 CREB3L3Q68CJ9 461 aa33.77■■■■□ 3
SCARA3-202ENST00000337221 SEC62Q99442 399 aaKnown RBP33.77■■■■□ 3
SCARA3-202ENST00000337221 FKBP4Q02790 459 aaKnown RBP eCLIP33.76■■■□□ 2.99
SCARA3-202ENST00000337221 C3orf67Q6ZVT6 689 aa33.76■■■□□ 2.99
SCARA3-202ENST00000337221 SETDB2Q96T68 719 aa33.76■■■□□ 2.99
SCARA3-202ENST00000337221 COL4A1P02462 1669 aa33.76■■■□□ 2.99
SCARA3-202ENST00000337221 IGHMBP2P38935 993 aaKnown RBP33.75■■■□□ 2.99
SCARA3-202ENST00000337221 HELBQ8NG08 1087 aaPredicted RBP33.75■■■□□ 2.99
SCARA3-202ENST00000337221 LPIN2Q92539 896 aa33.75■■■□□ 2.99
SCARA3-202ENST00000337221 TMX3Q96JJ7 454 aa33.75■■■□□ 2.99
SCARA3-202ENST00000337221 NYXQ9GZU5 481 aa33.75■■■□□ 2.99
SCARA3-202ENST00000337221 HELLSQ9NRZ9 838 aa33.75■■■□□ 2.99
SCARA3-202ENST00000337221 KCNJ4P48050 445 aa33.74■■■□□ 2.99
SCARA3-202ENST00000337221 ZMYM1Q5SVZ6 1142 aa33.74■■■□□ 2.99
SCARA3-202ENST00000337221 TTC14Q96N46 770 aa33.74■■■□□ 2.99
SCARA3-202ENST00000337221 SLC27A2O14975 620 aa33.73■■■□□ 2.99
SCARA3-202ENST00000337221 CCDC129Q6ZRS4 1044 aa33.73■■■□□ 2.99
SCARA3-202ENST00000337221 TM6SF1Q9BZW5 370 aa33.73■■■□□ 2.99
SCARA3-202ENST00000337221 RNF113AO15541 343 aaKnown RBP33.73■■■□□ 2.99
SCARA3-202ENST00000337221 ZAP70P43403 619 aa33.73■■■□□ 2.99
SCARA3-202ENST00000337221 TRAPPC3LQ5T215 181 aa33.73■■■□□ 2.99
SCARA3-202ENST00000337221 SSFA2P28290 1259 aa33.72■■■□□ 2.99
SCARA3-202ENST00000337221 ADCK5Q3MIX3 580 aa33.72■■■□□ 2.99
SCARA3-202ENST00000337221 ZKSCAN1P17029 563 aaPredicted RBP33.71■■■□□ 2.99
SCARA3-202ENST00000337221 MCAMP43121 646 aa33.71■■■□□ 2.99
SCARA3-202ENST00000337221 SLFNL1Q499Z3 407 aa33.71■■■□□ 2.99
SCARA3-202ENST00000337221 CDC5LQ99459 802 aaKnown RBP33.71■■■□□ 2.99
SCARA3-202ENST00000337221 UBR3Q6ZT12 1888 aa33.71■■■□□ 2.99
SCARA3-202ENST00000337221 PHF14O94880 888 aa33.7■■■□□ 2.99
SCARA3-202ENST00000337221 GTF2E1P29083 439 aaPredicted RBP33.7■■■□□ 2.99
SCARA3-202ENST00000337221 RFC4P35249 363 aa33.7■■■□□ 2.99
SCARA3-202ENST00000337221 CCDC102BQ68D86 513 aa33.7■■■□□ 2.99
SCARA3-202ENST00000337221 TRIM37O94972 964 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 CASTP20810 708 aaKnown RBP33.69■■■□□ 2.98
SCARA3-202ENST00000337221 ARID4AP29374 1257 aaPredicted RBP33.69■■■□□ 2.98
SCARA3-202ENST00000337221 CUL4AQ13619 759 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 RAB3GAP1Q15042 981 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 SLC27A3Q5K4L6 730 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 PI16Q6UXB8 463 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 NBPF5PQ86XG9 351 aaPredicted RBP33.69■■■□□ 2.98
SCARA3-202ENST00000337221 JAKMIP1Q96N16 626 aaKnown RBP33.69■■■□□ 2.98
SCARA3-202ENST00000337221 ZSWIM6Q9HCJ5 1215 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 SLC5A1P13866 664 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 PHKA1P46020 1223 aa33.69■■■□□ 2.98
SCARA3-202ENST00000337221 RBM6P78332 1123 aaKnown RBP33.69■■■□□ 2.98
SCARA3-202ENST00000337221 ZNF772Q68DY9 489 aaPredicted RBP33.69■■■□□ 2.98
SCARA3-202ENST00000337221 RPAP1Q9BWH6 1393 aaPredicted RBP33.68■■■□□ 2.98
SCARA3-202ENST00000337221 ADRA2BP18089 450 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms