RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 UBAP1LF5GYI3 381 aa14□□□□□ -0.17
FN1-202ENST00000336916 RBM28Q9NW13 759 aaKnown RBP14□□□□□ -0.17
FN1-202ENST00000336916 KLHL10Q6JEL2 608 aa14□□□□□ -0.17
FN1-202ENST00000336916 NUTM1Q86Y26 1132 aa14□□□□□ -0.17
FN1-202ENST00000336916 CCDC85AQ96PX6 553 aaPredicted RBP14□□□□□ -0.17
FN1-202ENST00000336916 MYO10Q9HD67 2058 aa14□□□□□ -0.17
FN1-202ENST00000336916 TTC41PQ6P2S7 1318 aa14□□□□□ -0.17
FN1-202ENST00000336916 TDRD12Q587J7 1177 aaKnown RBP14□□□□□ -0.17
FN1-202ENST00000336916 BICDL2A1A5D9 508 aa14□□□□□ -0.17
FN1-202ENST00000336916 KIAA1524Q8TCG1 905 aa14□□□□□ -0.17
FN1-202ENST00000336916 GAS8O95995 478 aa14□□□□□ -0.17
FN1-202ENST00000336916 STAT6P42226 847 aa14□□□□□ -0.17
FN1-202ENST00000336916 FAM177A1Q8N128 213 aaPredicted RBP14□□□□□ -0.17
FN1-202ENST00000336916 GABPB2Q8TAK5 448 aaPredicted RBP14□□□□□ -0.17
FN1-202ENST00000336916 STX8Q9UNK0 236 aa14□□□□□ -0.17
FN1-202ENST00000336916 SPECC1LQ69YQ0 1117 aa13.99□□□□□ -0.17
FN1-202ENST00000336916 ZBTB43O43298 467 aa13.99□□□□□ -0.17
FN1-202ENST00000336916 DKC1O60832 514 aaKnown RBP eCLIP13.99□□□□□ -0.172e-32■□□□□ 9.9
FN1-202ENST00000336916 ATP2A1O14983 1001 aa13.99□□□□□ -0.17
FN1-202ENST00000336916 RTN1Q16799 776 aa13.99□□□□□ -0.17
FN1-202ENST00000336916 KCNG1Q9UIX4 513 aa13.99□□□□□ -0.17
FN1-202ENST00000336916 NAA16Q6N069 864 aaPredicted RBP13.99□□□□□ -0.17
FN1-202ENST00000336916 LMBR1Q8WVP7 490 aa13.99□□□□□ -0.17
FN1-202ENST00000336916 CTNNBL1Q8WYA6 563 aaPredicted RBP13.99□□□□□ -0.17
FN1-202ENST00000336916 CCDC102AQ96A19 550 aa13.99□□□□□ -0.17
FN1-202ENST00000336916 GOLGA4Q13439 2230 aaKnown RBP13.99□□□□□ -0.17
FN1-202ENST00000336916 NME9Q86XW9 330 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 ATP10BO94823 1461 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 CCDC117Q8IWD4 279 aaPredicted RBP13.98□□□□□ -0.17
FN1-202ENST00000336916 ATP2B3Q16720 1220 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 MCMDC2Q4G0Z9 681 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 C6orf163Q5TEZ5 329 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 NPATQ14207 1427 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 LMAN1P49257 510 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 KIF4BQ2VIQ3 1234 aa13.98□□□□□ -0.17
FN1-202ENST00000336916 YTHDC2Q9H6S0 1430 aaKnown RBP13.98□□□□□ -0.17
FN1-202ENST00000336916 RRP36Q96EU6 259 aaKnown RBP13.97□□□□□ -0.17
FN1-202ENST00000336916 USP25Q9UHP3 1055 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 CDAN1Q8IWY9 1227 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 CCDC175P0C221 793 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 PSMA7O14818 248 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 TCERG1LQ5VWI1 586 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 MAP3K5Q99683 1374 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 CYLC1P35663 651 aaPredicted RBP13.97□□□□□ -0.17
FN1-202ENST00000336916 SPATA24Q86W54 205 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 FSIP1Q8NA03 581 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 USP16Q9Y5T5 823 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 GPTP24298 496 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 CCDC155Q8N6L0 562 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 CLIP2Q9UDT6 1046 aa13.97□□□□□ -0.17
FN1-202ENST00000336916 CROCC2H7BZ55 1655 aa13.96□□□□□ -0.17
FN1-202ENST00000336916 SLU7O95391 586 aaKnown RBP13.96□□□□□ -0.17
FN1-202ENST00000336916 PDE6BP35913 854 aa13.96□□□□□ -0.17
FN1-202ENST00000336916 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.96□□□□□ -0.171e-65■□□□□ 8.5
FN1-202ENST00000336916 V9GYY5 206 aaPredicted RBP13.96□□□□□ -0.17
FN1-202ENST00000336916 HDAC1Q13547 482 aaPredicted RBP13.96□□□□□ -0.17
FN1-202ENST00000336916 KIAA0753Q2KHM9 967 aa13.96□□□□□ -0.17
FN1-202ENST00000336916 ATP10AO60312 1499 aa13.96□□□□□ -0.17
FN1-202ENST00000336916 PRC1O43663 620 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.18
FN1-202ENST00000336916 UVSSAQ2YD98 709 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 DCAF5Q96JK2 942 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 GOPCQ9HD26 462 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 MIS18AQ9NYP9 233 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 SPHKAPQ2M3C7 1700 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 PI4KAP2A4QPH2 592 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 CHMP4BP1P59074 171 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 PI4KAP1Q8N8J0 262 aa13.96□□□□□ -0.18
FN1-202ENST00000336916 PHACTR2O75167 634 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 SLC8A3P57103 927 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 SPECC1Q5M775 1068 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 RBM17Q96I25 401 aaKnown RBP13.95□□□□□ -0.18
FN1-202ENST00000336916 PAXBP1Q9Y5B6 917 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 PRAG1Q86YV5 1406 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 TRAPPC8Q9Y2L5 1435 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 MICU3Q86XE3 530 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 LMTK3Q96Q04 1460 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 TUBBP07437 444 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 TRIM27P14373 513 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 KSR2Q6VAB6 950 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 TSGA10Q9BZW7 698 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 HS2ST1Q7LGA3 356 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 ARHGEF5Q12774 1597 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 NDC80O14777 642 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 SYKP43405 635 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 SUPT20HQ8NEM7 779 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 PICK1Q9NRD5 415 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 PARP10Q53GL7 1025 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 ZSCAN30Q86W11 494 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 ARHGEF10LQ9HCE6 1279 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 PIK3C2GO75747 1445 aa13.95□□□□□ -0.18
FN1-202ENST00000336916 NOP2P46087 812 aaKnown RBP13.94□□□□□ -0.18
FN1-202ENST00000336916 CGNQ9P2M7 1197 aaKnown RBP13.94□□□□□ -0.18
FN1-202ENST00000336916 MAGEB6P1A0A0J9YX57 407 aa13.94□□□□□ -0.18
FN1-202ENST00000336916 MRPS9P82933 396 aaKnown RBP13.94□□□□□ -0.18
FN1-202ENST00000336916 PNMA2Q9UL42 364 aa13.94□□□□□ -0.18
FN1-202ENST00000336916 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
FN1-202ENST00000336916 ORC3Q9UBD5 711 aaPredicted RBP13.94□□□□□ -0.18
FN1-202ENST00000336916 MACROD2A1Z1Q3 448 aa13.94□□□□□ -0.18
FN1-202ENST00000336916 KDM5CP41229 1560 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms