RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 MAP2P11137 1827 aaKnown RBP9.74□□□□□ -0.85
SKA2-201ENST00000330137 ZKSCAN1P17029 563 aaPredicted RBP9.74□□□□□ -0.85
SKA2-201ENST00000330137 GOLGA1Q92805 767 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 PRAM1Q96QH2 718 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 TMX1Q9H3N1 280 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 PARP3Q9Y6F1 533 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 ERLIN1O75477 346 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 ATP6V1AP38606 617 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 TXLNAP40222 546 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 SF3B2Q13435 895 aaKnown RBP9.74□□□□□ -0.85
SKA2-201ENST00000330137 TPRNQ4KMQ1 711 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 HOMER1Q86YM7 354 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 RASEFQ8IZ41 740 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 GBP3Q9H0R5 595 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 CXorf56Q9H5V9 222 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 SNRKQ9NRH2 765 aa9.74□□□□□ -0.85
SKA2-201ENST00000330137 NRKQ7Z2Y5 1582 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 ELL2O00472 640 aaPredicted RBP9.73□□□□□ -0.85
SKA2-201ENST00000330137 APOBRQ0VD83 1088 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 ARID5BQ14865 1188 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 ME3Q16798 604 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 TSGA10IPQ3SY00 556 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 CDC37L1Q7L3B6 337 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 ERC1Q8IUD2 1116 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 FAM71BQ8TC56 605 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 STAG1Q8WVM7 1258 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 PGBD1Q96JS3 809 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 CABP2Q9NPB3 220 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 RAB21Q9UL25 225 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 MYH15Q9Y2K3 1946 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 APBB1O00213 710 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 HIP1O00291 1037 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 PPFIA4O75335 1185 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 LARGE1O95461 756 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 ATXN8OSP0DMR3 200 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 GYS2P54840 703 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 SATB1Q01826 763 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 ST3GAL1Q11201 340 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 C11orf57Q6ZUT1 292 aaPredicted RBP9.73□□□□□ -0.85
SKA2-201ENST00000330137 ANKLE2Q86XL3 938 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 BANK1Q8NDB2 785 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 PI4K2BQ8TCG2 481 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 RCOR1Q9UKL0 485 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 MRFAP1Q9Y605 127 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 STRCQ7RTU9 1775 aa9.73□□□□□ -0.85
SKA2-201ENST00000330137 ADCY9O60503 1353 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 CBFA2T2O43439 604 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 IDI1Q13907 227 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 LONRF2Q1L5Z9 754 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 HSP90AB4PQ58FF6 505 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 ARMCX5Q6P1M9 558 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 SLC52A1Q9NWF4 448 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 ATF5Q9Y2D1 282 aaPredicted RBP9.72□□□□□ -0.85
SKA2-201ENST00000330137 XRN1Q8IZH2 1706 aaKnown RBP9.72□□□□□ -0.85
SKA2-201ENST00000330137 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.72□□□□□ -0.85
SKA2-201ENST00000330137 IKBKBO14920 756 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 NPHP1O15259 732 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 MYCNP04198 464 aaPredicted RBP9.72□□□□□ -0.85
SKA2-201ENST00000330137 CALRP27797 417 aaKnown RBP9.72□□□□□ -0.85
SKA2-201ENST00000330137 NECTIN1Q15223 517 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 TADA2BQ86TJ2 420 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 SSH3Q8TE77 659 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 CARD6Q9BX69 1037 aa9.72□□□□□ -0.85
SKA2-201ENST00000330137 FAM160A1Q05DH4 1040 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 DNAJC21Q5F1R6 531 aaKnown RBP9.71□□□□□ -0.85
SKA2-201ENST00000330137 CCDC73Q6ZRK6 1079 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 UNC5CLQ8IV45 518 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 LRRN4CLQ8ND94 238 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 ANKRD20A12PQ8NF67 263 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 JAKMIP1Q96N16 626 aaKnown RBP9.71□□□□□ -0.85
SKA2-201ENST00000330137 THUMPD2Q9BTF0 503 aaKnown RBP9.71□□□□□ -0.85
SKA2-201ENST00000330137 PARD6BQ9BYG5 372 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 VIPAS39Q9H9C1 493 aa9.71□□□□□ -0.85
SKA2-201ENST00000330137 ATXN2Q99700 1313 aaKnown RBP9.71□□□□□ -0.86
SKA2-201ENST00000330137 ARHGAP6O43182 974 aa9.71□□□□□ -0.86
SKA2-201ENST00000330137 KINO60870 393 aaKnown RBP9.71□□□□□ -0.86
SKA2-201ENST00000330137 URI1O94763 535 aaPredicted RBP9.71□□□□□ -0.86
SKA2-201ENST00000330137 SEC31AO94979 1220 aaKnown RBP9.71□□□□□ -0.86
SKA2-201ENST00000330137 RESTQ13127 1097 aa9.71□□□□□ -0.86
SKA2-201ENST00000330137 MSANTD4Q8NCY6 345 aa9.71□□□□□ -0.86
SKA2-201ENST00000330137 DRC1Q96MC2 740 aa9.71□□□□□ -0.86
SKA2-201ENST00000330137 ZCCHC17Q9NP64 241 aaKnown RBP9.71□□□□□ -0.86
SKA2-201ENST00000330137 EID1Q9Y6B2 187 aa9.71□□□□□ -0.86
SKA2-201ENST00000330137 GLRX3O76003 335 aaKnown RBP9.7□□□□□ -0.86
SKA2-201ENST00000330137 MAP2K2P36507 400 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 PPP2R3AQ06190 1150 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 KRT24Q2M2I5 525 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 CCAR1Q8IX12 1150 aaKnown RBP9.7□□□□□ -0.86
SKA2-201ENST00000330137 ENGASEQ8NFI3 743 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 ERCC4Q92889 916 aaPredicted RBP9.7□□□□□ -0.86
SKA2-201ENST00000330137 LLPHQ9BRT6 129 aaKnown RBP9.7□□□□□ -0.86
SKA2-201ENST00000330137 IL25Q9H293 177 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 DLC1Q96QB1 1528 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 CT47A1Q5JQC4 288 aaPredicted RBP9.7□□□□□ -0.86
SKA2-201ENST00000330137 NAA16Q6N069 864 aaPredicted RBP9.7□□□□□ -0.86
SKA2-201ENST00000330137 CEP112Q8N8E3 955 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 HMG20BQ9P0W2 317 aa9.7□□□□□ -0.86
SKA2-201ENST00000330137 UBR1Q8IWV7 1749 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms