RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 RBM10P98175 930 aaKnown RBP3.31□□□□□ -1.88
RGPD6-201ENST00000329516 GOLGA2Q08379 1002 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 FRAS1Q86XX4 4008 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 TCRBV5S4A2TA0A5A2 114 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 GOLGA6L4A6NEF3 574 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 KIF20AO95235 890 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 SKIDA1Q1XH10 827 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 CRYGNQ8WXF5 182 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 ATRNL1Q5VV63 1379 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 HNRNPUQ00839 825 aaKnown RBP eCLIP3.31□□□□□ -1.88
RGPD6-201ENST00000329516 SSH3Q8TE77 659 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 WDR70Q9NW82 654 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 BCL2L12Q9HB09 334 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 DAXXQ9UER7 740 aaPredicted RBP3.31□□□□□ -1.88
RGPD6-201ENST00000329516 PDZRN3Q9UPQ7 1066 aa3.31□□□□□ -1.88
RGPD6-201ENST00000329516 HAP1P54257 671 aaPredicted RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 RUFY3Q7L099 469 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 LCMT1Q9UIC8 334 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 LETM1O95202 739 aaPredicted RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 ADRA2BP18089 450 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 PTH1RQ03431 593 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 KCTD19Q17RG1 926 aaPredicted RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 TSHZ3Q63HK5 1081 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 SCN8AQ9UQD0 1980 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 KIAA1217Q5T5P2 1943 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 MTCL1Q9Y4B5 1905 aaKnown RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 DNAH3Q8TD57 4116 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 ZRANB2O95218 330 aaKnown RBP eCLIP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 ADGRA1Q86SQ6 560 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 SYNE4Q8N205 404 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 PHAXQ9H814 394 aaKnown RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 GPHNQ9NQX3 736 aaPredicted RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 TDRD15B5MCY1 1934 aaKnown RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 MMP14P50281 582 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 HLFQ16534 295 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 TBC1D9Q6ZT07 1266 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 ANKRD7Q92527 254 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 RNF216Q9NWF9 866 aaPredicted RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 ARID5BQ14865 1188 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 IL17AQ16552 155 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 KCND1Q9NSA2 647 aa3.3□□□□□ -1.88
RGPD6-201ENST00000329516 LAS1LQ9Y4W2 734 aaKnown RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 COL27A1Q8IZC6 1860 aaPredicted RBP3.3□□□□□ -1.88
RGPD6-201ENST00000329516 SASH3O75995 380 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 RALBP1Q15311 655 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 USP27XA6NNY8 438 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 ECHS1P30084 290 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 MVPQ14764 893 aaKnown RBP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 AXDND1Q5T1B0 1012 aaPredicted RBP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 ZNF589Q86UQ0 364 aaPredicted RBP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 KCNA6P17658 529 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 E4F1Q66K89 784 aaPredicted RBP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 FUBP1Q96AE4 644 aaKnown RBP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 CRISPLD1Q9H336 500 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 HDAC5Q9UQL6 1122 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 HDGFP51858 240 aaKnown RBP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 FOXO4P98177 505 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 GRIN1Q05586 938 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 GJB4Q9NTQ9 266 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 RAD50Q92878 1312 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 KCNA4P22459 653 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 ARHGEF25Q86VW2 580 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 EPB41L4BQ9H329 900 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 REXO2Q9Y3B8 237 aaKnown RBP3.29□□□□□ -1.88
RGPD6-201ENST00000329516 APCP25054 2843 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 PRELPP51888 382 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 SPRYD3Q8NCJ5 442 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 PCDHA3Q9Y5H8 950 aa3.29□□□□□ -1.88
RGPD6-201ENST00000329516 SPATA31A5Q5VU36 1347 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 SPATA31A7Q8IWB4 1347 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 CLGNO14967 610 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 HSP90AB1P08238 724 aaKnown RBP3.28□□□□□ -1.88
RGPD6-201ENST00000329516 EXOSC9Q06265 439 aaKnown RBP3.28□□□□□ -1.88
RGPD6-201ENST00000329516 PLEKHO1Q53GL0 409 aaPredicted RBP3.28□□□□□ -1.88
RGPD6-201ENST00000329516 NYAP1Q6ZVC0 841 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 MEFVO15553 781 aaPredicted RBP3.28□□□□□ -1.88
RGPD6-201ENST00000329516 PPP1R37O75864 691 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 SLURP2P0DP57 97 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 XAGE2Q96GT9 111 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 PLAC1Q9HBJ0 212 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 CHGAP10645 457 aaKnown RBP3.28□□□□□ -1.88
RGPD6-201ENST00000329516 BYSLQ13895 437 aaKnown RBP3.28□□□□□ -1.88
RGPD6-201ENST00000329516 PROM2Q8N271 834 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 PRM3Q9NNZ6 103 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 CABP1Q9NZU7 370 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 WDR63Q8IWG1 891 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 GBF1Q92538 1859 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 NKX1-1Q15270 411 aaPredicted RBP3.28□□□□□ -1.88
RGPD6-201ENST00000329516 STK11IPQ8N1F8 1099 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 TRERF1Q96PN7 1200 aa3.28□□□□□ -1.88
RGPD6-201ENST00000329516 CNTNAP1P78357 1384 aa3.28□□□□□ -1.89
RGPD6-201ENST00000329516 PTMSP20962 102 aa3.28□□□□□ -1.89
RGPD6-201ENST00000329516 SLC24A1O60721 1099 aa3.27□□□□□ -1.89
RGPD6-201ENST00000329516 CPA1P15085 419 aa3.27□□□□□ -1.89
RGPD6-201ENST00000329516 ZNF445P59923 1031 aa3.27□□□□□ -1.89
RGPD6-201ENST00000329516 HMGN5P82970 282 aaKnown RBP3.27□□□□□ -1.89
RGPD6-201ENST00000329516 EXOSC10Q01780 885 aaKnown RBP3.27□□□□□ -1.89
RGPD6-201ENST00000329516 GRIK5Q16478 980 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms