RNA–Protein interactions for RNA: ENST00000322019.13

TM6SF1-202, Transcript of transmembrane 6 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM6SF1, Length 2,074 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-202ENST00000322019 CCDC152Q4G0S7 254 aa31.9■■■□□ 2.7
TM6SF1-202ENST00000322019 K7ELQ4 463 aaPredicted RBP31.9■■■□□ 2.7
TM6SF1-202ENST00000322019 IFIT1P09914 478 aaKnown RBP31.9■■■□□ 2.7
TM6SF1-202ENST00000322019 HSPA4P34932 840 aa31.9■■■□□ 2.7
TM6SF1-202ENST00000322019 SNRKQ9NRH2 765 aa31.89■■■□□ 2.7
TM6SF1-202ENST00000322019 PAG1Q9NWQ8 432 aa31.89■■■□□ 2.7
TM6SF1-202ENST00000322019 ABCC12Q96J65 1359 aa31.89■■■□□ 2.7
TM6SF1-202ENST00000322019 SNAP23O00161 211 aa31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 RBM6P78332 1123 aaKnown RBP31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 SCARF1Q14162 830 aa31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 ZNF589Q86UQ0 364 aaPredicted RBP31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 LRP5O75197 1615 aa31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 HIP1O00291 1037 aa31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 ZNF772Q68DY9 489 aaPredicted RBP31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 SETDB2Q96T68 719 aa31.88■■■□□ 2.69
TM6SF1-202ENST00000322019 GTF2E1P29083 439 aaPredicted RBP31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 RFC4P35249 363 aa31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 TTC39AQ5SRH9 613 aa31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 LAMB2P55268 1798 aa31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 PDE8BO95263 885 aa31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 TRAPPC3LQ5T215 181 aa31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 PI16Q6UXB8 463 aa31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 MPHOSPH8Q99549 860 aa31.87■■■□□ 2.69
TM6SF1-202ENST00000322019 TAF5LO75529 589 aa31.86■■■□□ 2.69
TM6SF1-202ENST00000322019 C4AP0C0L4 1744 aa31.86■■■□□ 2.69
TM6SF1-202ENST00000322019 NEK4P51957 841 aa31.86■■■□□ 2.69
TM6SF1-202ENST00000322019 FKBP4Q02790 459 aaKnown RBP eCLIP31.86■■■□□ 2.69
TM6SF1-202ENST00000322019 CCDC158Q5M9N0 1113 aa31.86■■■□□ 2.69
TM6SF1-202ENST00000322019 RASEFQ8IZ41 740 aa31.86■■■□□ 2.69
TM6SF1-202ENST00000322019 SEC62Q99442 399 aaKnown RBP31.86■■■□□ 2.69
TM6SF1-202ENST00000322019 UPF3BQ9BZI7 483 aaKnown RBP31.85■■■□□ 2.69
TM6SF1-202ENST00000322019 SPEF2Q9C093 1822 aa31.85■■■□□ 2.69
TM6SF1-202ENST00000322019 KBTBD3Q8NAB2 608 aa31.85■■■□□ 2.69
TM6SF1-202ENST00000322019 NBPF5PQ86XG9 351 aaPredicted RBP31.84■■■□□ 2.69
TM6SF1-202ENST00000322019 CCDC171Q6TFL3 1326 aa31.84■■■□□ 2.69
TM6SF1-202ENST00000322019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.84■■■□□ 2.69
TM6SF1-202ENST00000322019 ANAPC15P60006 121 aa31.84■■■□□ 2.69
TM6SF1-202ENST00000322019 CCDC129Q6ZRS4 1044 aa31.84■■■□□ 2.69
TM6SF1-202ENST00000322019 MED23Q9ULK4 1368 aa31.83■■■□□ 2.69
TM6SF1-202ENST00000322019 SNX14Q9Y5W7 946 aa31.83■■■□□ 2.69
TM6SF1-202ENST00000322019 ST18O60284 1047 aa31.82■■■□□ 2.68
TM6SF1-202ENST00000322019 TAF1P21675 1872 aa31.82■■■□□ 2.68
TM6SF1-202ENST00000322019 HSP90B1P14625 803 aaKnown RBP31.82■■■□□ 2.68
TM6SF1-202ENST00000322019 PRPF40BQ6NWY9 871 aaKnown RBP31.82■■■□□ 2.68
TM6SF1-202ENST00000322019 EPB41L2O43491 1005 aaKnown RBP31.81■■■□□ 2.68
TM6SF1-202ENST00000322019 PROM2Q8N271 834 aa31.81■■■□□ 2.68
TM6SF1-202ENST00000322019 MROH5Q6ZUA9 1318 aa31.81■■■□□ 2.68
TM6SF1-202ENST00000322019 IGHMBP2P38935 993 aaKnown RBP31.8■■■□□ 2.68
TM6SF1-202ENST00000322019 RTL9Q8NET4 1388 aa31.8■■■□□ 2.68
TM6SF1-202ENST00000322019 HSP90AA1P07900 732 aaKnown RBP31.8■■■□□ 2.68
TM6SF1-202ENST00000322019 RGL2O15211 777 aa31.79■■■□□ 2.68
TM6SF1-202ENST00000322019 ZAP70P43403 619 aa31.79■■■□□ 2.68
TM6SF1-202ENST00000322019 PUM3Q15397 648 aaKnown RBP31.79■■■□□ 2.68
TM6SF1-202ENST00000322019 RBM8AQ9Y5S9 174 aaKnown RBP31.79■■■□□ 2.68
TM6SF1-202ENST00000322019 NOL8Q76FK4 1167 aaKnown RBP31.79■■■□□ 2.68
TM6SF1-202ENST00000322019 CASZ1Q86V15 1759 aa31.78■■■□□ 2.68
TM6SF1-202ENST00000322019 MCAMP43121 646 aa31.78■■■□□ 2.68
TM6SF1-202ENST00000322019 PHKA1P46020 1223 aa31.78■■■□□ 2.68
TM6SF1-202ENST00000322019 COL24A1Q17RW2 1714 aa31.78■■■□□ 2.68
TM6SF1-202ENST00000322019 FGFR2P21802 821 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 NFKBIBQ15653 356 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 SLC27A3Q5K4L6 730 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 PPIL4Q8WUA2 492 aaKnown RBP eCLIP31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 NYXQ9GZU5 481 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 KCNJ4P48050 445 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 SF3B3Q15393 1217 aaKnown RBP31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 TXNRD1Q16881 649 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 MAP4K1Q92918 833 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 IL17RAQ96F46 866 aa31.77■■■□□ 2.68
TM6SF1-202ENST00000322019 NFIXQ14938 502 aa31.76■■■□□ 2.68
TM6SF1-202ENST00000322019 RFX7Q2KHR2 1363 aa31.76■■■□□ 2.67
TM6SF1-202ENST00000322019 CPA1P15085 419 aa31.76■■■□□ 2.67
TM6SF1-202ENST00000322019 CCDC102BQ68D86 513 aa31.76■■■□□ 2.67
TM6SF1-202ENST00000322019 UBR3Q6ZT12 1888 aa31.76■■■□□ 2.67
TM6SF1-202ENST00000322019 LPIN2Q92539 896 aa31.76■■■□□ 2.67
TM6SF1-202ENST00000322019 WTIPA6NIX2 430 aaPredicted RBP31.75■■■□□ 2.67
TM6SF1-202ENST00000322019 CHRNDQ07001 517 aa31.75■■■□□ 2.67
TM6SF1-202ENST00000322019 NECTIN1Q15223 517 aa31.75■■■□□ 2.67
TM6SF1-202ENST00000322019 SLC10A5Q5PT55 438 aa31.75■■■□□ 2.67
TM6SF1-202ENST00000322019 TPTE2Q6XPS3 522 aa31.75■■■□□ 2.67
TM6SF1-202ENST00000322019 CELF1Q92879 486 aaKnown RBP31.75■■■□□ 2.67
TM6SF1-202ENST00000322019 NPHP1O15259 732 aa31.74■■■□□ 2.67
TM6SF1-202ENST00000322019 ADCK5Q3MIX3 580 aa31.74■■■□□ 2.67
TM6SF1-202ENST00000322019 CDC5LQ99459 802 aaKnown RBP31.74■■■□□ 2.67
TM6SF1-202ENST00000322019 RXRBP28702 533 aa31.74■■■□□ 2.67
TM6SF1-202ENST00000322019 DDIT3P35638 169 aa31.74■■■□□ 2.67
TM6SF1-202ENST00000322019 MCMDC2Q4G0Z9 681 aa31.74■■■□□ 2.67
TM6SF1-202ENST00000322019 TAF6LQ9Y6J9 622 aa31.74■■■□□ 2.67
TM6SF1-202ENST00000322019 ANKRD18AQ8IVF6 992 aa31.73■■■□□ 2.67
TM6SF1-202ENST00000322019 CREB3L3Q68CJ9 461 aa31.72■■■□□ 2.67
TM6SF1-202ENST00000322019 FRAT2O75474 233 aaPredicted RBP31.72■■■□□ 2.67
TM6SF1-202ENST00000322019 NLRP3Q96P20 1036 aa31.72■■■□□ 2.67
TM6SF1-202ENST00000322019 DEKP35659 375 aaKnown RBP31.71■■■□□ 2.67
TM6SF1-202ENST00000322019 COL9A3Q14050 684 aaPredicted RBP31.71■■■□□ 2.67
TM6SF1-202ENST00000322019 SLC5A1P13866 664 aa31.71■■■□□ 2.67
TM6SF1-202ENST00000322019 ADRA2BP18089 450 aa31.71■■■□□ 2.67
TM6SF1-202ENST00000322019 RNF113AO15541 343 aaKnown RBP31.7■■■□□ 2.67
TM6SF1-202ENST00000322019 APBA3O96018 575 aa31.7■■■□□ 2.67
TM6SF1-202ENST00000322019 GYS1P13807 737 aa31.7■■■□□ 2.67
TM6SF1-202ENST00000322019 CHMP5Q9NZZ3 219 aa31.7■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms