RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 NMIQ13287 307 aaPredicted RBP21.55■■□□□ 1.04
RAB39A-201ENST00000320578 KCNB2Q92953 911 aa21.55■■□□□ 1.04
RAB39A-201ENST00000320578 LRRC4BQ9NT99 713 aa21.55■■□□□ 1.04
RAB39A-201ENST00000320578 BRWD3Q6RI45 1802 aa21.54■■□□□ 1.04
RAB39A-201ENST00000320578 IFIT1P09914 478 aaKnown RBP21.54■■□□□ 1.04
RAB39A-201ENST00000320578 PAG1Q9NWQ8 432 aa21.54■■□□□ 1.04
RAB39A-201ENST00000320578 COL24A1Q17RW2 1714 aa21.54■■□□□ 1.04
RAB39A-201ENST00000320578 MED23Q9ULK4 1368 aa21.53■■□□□ 1.04
RAB39A-201ENST00000320578 FAM177BA6PVY3 158 aa21.53■■□□□ 1.04
RAB39A-201ENST00000320578 IGHMBP2P38935 993 aaKnown RBP21.53■■□□□ 1.04
RAB39A-201ENST00000320578 MCM2P49736 904 aa21.53■■□□□ 1.04
RAB39A-201ENST00000320578 CDC5LQ99459 802 aaKnown RBP21.53■■□□□ 1.04
RAB39A-201ENST00000320578 FGFR2P21802 821 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 RFC4P35249 363 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 LRRFIP1Q32MZ4 808 aaKnown RBP21.52■■□□□ 1.04
RAB39A-201ENST00000320578 ERFEQ4G0M1 354 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 GORABQ5T7V8 394 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 DNAJC2Q99543 621 aaKnown RBP21.52■■□□□ 1.04
RAB39A-201ENST00000320578 MPHOSPH8Q99549 860 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 SRP68Q9UHB9 627 aaKnown RBP21.52■■□□□ 1.04
RAB39A-201ENST00000320578 CCDC171Q6TFL3 1326 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 PUM3Q15397 648 aaKnown RBP21.52■■□□□ 1.04
RAB39A-201ENST00000320578 TTC39AQ5SRH9 613 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 TPTE2Q6XPS3 522 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 LPIN2Q92539 896 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 FAM227BQ96M60 508 aa21.52■■□□□ 1.04
RAB39A-201ENST00000320578 CD2BP2O95400 341 aaKnown RBP21.51■■□□□ 1.03
RAB39A-201ENST00000320578 MAP4K1Q92918 833 aa21.51■■□□□ 1.03
RAB39A-201ENST00000320578 PALD1Q9ULE6 856 aa21.51■■□□□ 1.03
RAB39A-201ENST00000320578 TRIM37O94972 964 aa21.5■■□□□ 1.03
RAB39A-201ENST00000320578 SSFA2P28290 1259 aa21.5■■□□□ 1.03
RAB39A-201ENST00000320578 ADORA1P30542 326 aa21.5■■□□□ 1.03
RAB39A-201ENST00000320578 EDC3Q96F86 508 aaKnown RBP21.5■■□□□ 1.03
RAB39A-201ENST00000320578 A0A0D9SFI3 127 aa21.5■■□□□ 1.03
RAB39A-201ENST00000320578 AMIGO3Q86WK7 504 aa21.5■■□□□ 1.03
RAB39A-201ENST00000320578 SEC31BQ9NQW1 1179 aa21.5■■□□□ 1.03
RAB39A-201ENST00000320578 HELLSQ9NRZ9 838 aa21.5■■□□□ 1.03
RAB39A-201ENST00000320578 PLSCR1O15162 318 aa21.49■■□□□ 1.03
RAB39A-201ENST00000320578 NBPF5PQ86XG9 351 aaPredicted RBP21.49■■□□□ 1.03
RAB39A-201ENST00000320578 GOLIM4O00461 696 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 UQCRFS1P1P0C7P4 283 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 GTF2E1P29083 439 aaPredicted RBP21.48■■□□□ 1.03
RAB39A-201ENST00000320578 DDIT3P35638 169 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 NECTIN1Q15223 517 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 MCMDC2Q4G0Z9 681 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 DDX46Q7L014 1031 aaKnown RBP21.48■■□□□ 1.03
RAB39A-201ENST00000320578 CIZ1Q9ULV3 898 aaPredicted RBP21.48■■□□□ 1.03
RAB39A-201ENST00000320578 PTH1RQ03431 593 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 BICDL1Q6ZP65 573 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 NLRP3Q96P20 1036 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 CHMP5Q9NZZ3 219 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 SNX14Q9Y5W7 946 aa21.48■■□□□ 1.03
RAB39A-201ENST00000320578 C4AP0C0L4 1744 aa21.47■■□□□ 1.03
RAB39A-201ENST00000320578 ZFYP08048 801 aaPredicted RBP21.47■■□□□ 1.03
RAB39A-201ENST00000320578 SLC5A1P13866 664 aa21.47■■□□□ 1.03
RAB39A-201ENST00000320578 RXRBP28702 533 aa21.47■■□□□ 1.03
RAB39A-201ENST00000320578 ARID4AP29374 1257 aaPredicted RBP21.47■■□□□ 1.03
RAB39A-201ENST00000320578 SMIM5Q71RC9 77 aa21.47■■□□□ 1.03
RAB39A-201ENST00000320578 TM6SF1Q9BZW5 370 aa21.47■■□□□ 1.03
RAB39A-201ENST00000320578 BSDC1Q9NW68 430 aaPredicted RBP21.47■■□□□ 1.03
RAB39A-201ENST00000320578 CARMIL3Q8ND23 1372 aa21.47■■□□□ 1.03
RAB39A-201ENST00000320578 NEK4P51957 841 aa21.46■■□□□ 1.03
RAB39A-201ENST00000320578 ZMYM1Q5SVZ6 1142 aa21.46■■□□□ 1.03
RAB39A-201ENST00000320578 ANKRD18AQ8IVF6 992 aa21.46■■□□□ 1.03
RAB39A-201ENST00000320578 SLKQ9H2G2 1235 aaPredicted RBP21.46■■□□□ 1.03
RAB39A-201ENST00000320578 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.45■■□□□ 1.03
RAB39A-201ENST00000320578 RNF113AO15541 343 aaKnown RBP21.45■■□□□ 1.03
RAB39A-201ENST00000320578 TAF5LO75529 589 aa21.45■■□□□ 1.03
RAB39A-201ENST00000320578 ARAP2Q8WZ64 1704 aa21.45■■□□□ 1.02
RAB39A-201ENST00000320578 UBR3Q6ZT12 1888 aa21.45■■□□□ 1.02
RAB39A-201ENST00000320578 TTF1Q15361 905 aaPredicted RBP21.45■■□□□ 1.02
RAB39A-201ENST00000320578 TXNRD1Q16881 649 aa21.45■■□□□ 1.02
RAB39A-201ENST00000320578 TSGA10IPQ3SY00 556 aa21.45■■□□□ 1.02
RAB39A-201ENST00000320578 HMG20BQ9P0W2 317 aa21.45■■□□□ 1.02
RAB39A-201ENST00000320578 RBM8AQ9Y5S9 174 aaKnown RBP21.45■■□□□ 1.02
RAB39A-201ENST00000320578 NDUFB9Q9Y6M9 179 aa21.45■■□□□ 1.02
RAB39A-201ENST00000320578 RNF20Q5VTR2 975 aa21.44■■□□□ 1.02
RAB39A-201ENST00000320578 ZKSCAN1P17029 563 aaPredicted RBP21.43■■□□□ 1.02
RAB39A-201ENST00000320578 CCDC102BQ68D86 513 aa21.43■■□□□ 1.02
RAB39A-201ENST00000320578 C3orf67Q6ZVT6 689 aa21.43■■□□□ 1.02
RAB39A-201ENST00000320578 ZNF589Q86UQ0 364 aaPredicted RBP21.43■■□□□ 1.02
RAB39A-201ENST00000320578 PROM2Q8N271 834 aa21.43■■□□□ 1.02
RAB39A-201ENST00000320578 PHF14O94880 888 aa21.43■■□□□ 1.02
RAB39A-201ENST00000320578 FKBP4Q02790 459 aaKnown RBP eCLIP21.43■■□□□ 1.02
RAB39A-201ENST00000320578 CHRNDQ07001 517 aa21.43■■□□□ 1.02
RAB39A-201ENST00000320578 NFIXQ14938 502 aa21.43■■□□□ 1.02
RAB39A-201ENST00000320578 RASEFQ8IZ41 740 aa21.43■■□□□ 1.02
RAB39A-201ENST00000320578 CREB3L3Q68CJ9 461 aa21.42■■□□□ 1.02
RAB39A-201ENST00000320578 U3KPZ7 1027 aaPredicted RBP21.42■■□□□ 1.02
RAB39A-201ENST00000320578 HSP90AA1P07900 732 aaKnown RBP21.41■■□□□ 1.02
RAB39A-201ENST00000320578 GYS1P13807 737 aa21.41■■□□□ 1.02
RAB39A-201ENST00000320578 MCAMP43121 646 aa21.41■■□□□ 1.02
RAB39A-201ENST00000320578 ZAP70P43403 619 aa21.41■■□□□ 1.02
RAB39A-201ENST00000320578 UBE4AQ14139 1066 aa21.41■■□□□ 1.02
RAB39A-201ENST00000320578 SCARF1Q14162 830 aa21.41■■□□□ 1.02
RAB39A-201ENST00000320578 ZSCAN25Q6NSZ9 544 aa21.41■■□□□ 1.02
RAB39A-201ENST00000320578 PRPF40BQ6NWY9 871 aaKnown RBP21.41■■□□□ 1.02
RAB39A-201ENST00000320578 HELBQ8NG08 1087 aaPredicted RBP21.41■■□□□ 1.02
RAB39A-201ENST00000320578 DSCC1Q9BVC3 393 aa21.41■■□□□ 1.02
RAB39A-201ENST00000320578 CWC22Q9HCG8 908 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms